RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 HAVCR1Q96D42 359 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 SMIM8Q96KF7 97 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 PACRGQ96M98 296 aaPredicted RBP4.18□□□□□ -1.74
CSMD3-208ENST00000497026 OXGR1Q96P68 337 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 PHB2Q99623 299 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 FOXC2Q99958 501 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 OR51B6Q9H340 312 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 HRH4Q9H3N8 390 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 FKRPQ9H9S5 495 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 C20orf141Q9NUB4 165 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 MED29Q9NX70 200 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 A4GNTQ9UNA3 340 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 FOXJ3Q9UPW0 622 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 B3GALT5Q9Y2C3 310 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 ANKRD17O75179 2603 aaKnown RBP4.18□□□□□ -1.74
CSMD3-208ENST00000497026 ROS1P08922 2347 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 CCDC168Q8NDH2 2452 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 TMEM272A0A1B0GTI8 110 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 TMEM235A6NFC5 223 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 A8MWP6 167 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 SHISA9B4DS77 424 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 UMAD1C9J7I0 102 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 H7C417 338 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 PLPP3O14495 311 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 FFAR1O14842 300 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 PIP5K1CO60331 668 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 GLCEO94923 617 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 CH25HO95992 272 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 MT-ATP6P00846 226 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 GCGP01275 180 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 CD5P06127 495 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 IGFBP1P08833 259 aaPredicted RBP4.17□□□□□ -1.74
CSMD3-208ENST00000497026 ASAH2BP0C7U1 165 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 DANCRP0C864 163 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 HNF1AP20823 631 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 MPZP25189 248 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 DCTDP32321 178 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 CD80P33681 288 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 ZNF84P51523 738 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 TAS2R41P59536 307 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 TAS2R31P59538 309 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 LSM6P62312 80 aaKnown RBP4.17□□□□□ -1.74
CSMD3-208ENST00000497026 POU3F1Q03052 451 aaPredicted RBP4.17□□□□□ -1.74
CSMD3-208ENST00000497026 SPOCK1Q08629 439 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 INSL4Q14641 139 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 CLINT1Q14677 625 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 ATXN7L3Q14CW9 347 aaPredicted RBP4.17□□□□□ -1.74
CSMD3-208ENST00000497026 ACKR1Q16570 336 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 HIKESHIQ53FT3 197 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 KHDC3LQ587J8 217 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 CYB5R2Q6BCY4 276 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 HEPN1Q6WQI6 88 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 COLCA1Q6ZS62 124 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 H1FNTQ75WM6 255 aaPredicted RBP4.17□□□□□ -1.74
CSMD3-208ENST00000497026 MYPOPQ86VE0 399 aaPredicted RBP4.17□□□□□ -1.74
CSMD3-208ENST00000497026 C1orf87Q8N0U7 546 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 C17orf78Q8N4C9 275 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 FAM24BQ8N5W8 94 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 ZNF611Q8N823 705 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 OR5T1Q8NG75 326 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 OR2T33Q8NG76 320 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 OR5AP2Q8NGF4 316 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 OR1K1Q8NGR3 316 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 OR4K15Q8NH41 348 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 OR52N5Q8NH56 324 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 OR10J5Q8NHC4 309 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 SYNPRQ8TBG9 265 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 NPRL2Q8WTW4 380 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 TMED6Q8WW62 240 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 CMBLQ96DG6 245 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 SMIM19Q96E16 107 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 EMC6Q9BV81 110 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 KRTAP1-5Q9BYS1 174 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 LINC00470Q9BZP3 86 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 RIMS4Q9H426 269 aaPredicted RBP4.17□□□□□ -1.74
CSMD3-208ENST00000497026 SMDT1Q9H4I9 107 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 UBTD1Q9HAC8 227 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 SPACA1Q9HBV2 294 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 SLC17A5Q9NRA2 495 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 DOK5Q9P104 306 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 MTFP1Q9UDX5 166 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 FAM96BQ9Y3D0 163 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 RNF115Q9Y4L5 304 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 F8P00451 2351 aa4.17□□□□□ -1.74
CSMD3-208ENST00000497026 HEATR1Q9H583 2144 aaKnown RBP4.17□□□□□ -1.74
CSMD3-208ENST00000497026 TEX15Q9BXT5 2789 aa4.16□□□□□ -1.74
CSMD3-208ENST00000497026 A0A087WWC5 75 aa4.16□□□□□ -1.74
CSMD3-208ENST00000497026 A0A0B4J2A0 478 aa4.16□□□□□ -1.74
CSMD3-208ENST00000497026 A0A1W2PN81 502 aa4.16□□□□□ -1.74
CSMD3-208ENST00000497026 C11orf98E9PRG8 122 aa4.16□□□□□ -1.74
CSMD3-208ENST00000497026 NDUFS8O00217 210 aa4.16□□□□□ -1.74
CSMD3-208ENST00000497026 HS3ST1O14792 307 aa4.16□□□□□ -1.74
CSMD3-208ENST00000497026 PHOX2AO14813 284 aa4.16□□□□□ -1.74
CSMD3-208ENST00000497026 OGG1O15527 345 aa4.16□□□□□ -1.74
CSMD3-208ENST00000497026 CIDEAO60543 219 aa4.16□□□□□ -1.74
CSMD3-208ENST00000497026 RPP14O95059 124 aaKnown RBP4.16□□□□□ -1.74
CSMD3-208ENST00000497026 HLA-AP01891 365 aaKnown RBP4.16□□□□□ -1.74
CSMD3-208ENST00000497026 SOD3P08294 240 aa4.16□□□□□ -1.74
CSMD3-208ENST00000497026 FABP4P15090 132 aa4.16□□□□□ -1.74
CSMD3-208ENST00000497026 HLA-GP17693 338 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms