RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 SNIP1Q8TAD8 396 aaKnown RBP9.38□□□□□ -0.91
CMSS1-208ENST00000496116 PLPPR1Q8TBJ4 325 aa9.38□□□□□ -0.91
CMSS1-208ENST00000496116 CACFD1Q9UGQ2 172 aa9.38□□□□□ -0.91
CMSS1-208ENST00000496116 A0A1B0GU03 582 aa9.38□□□□□ -0.91
CMSS1-208ENST00000496116 AHRRA9YTQ3 701 aa9.38□□□□□ -0.91
CMSS1-208ENST00000496116 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.38□□□□□ -0.91
CMSS1-208ENST00000496116 SLC25A6P12236 298 aa9.38□□□□□ -0.91
CMSS1-208ENST00000496116 CTRB1P17538 263 aa9.38□□□□□ -0.91
CMSS1-208ENST00000496116 SNCAP37840 140 aa9.38□□□□□ -0.91
CMSS1-208ENST00000496116 ID4P47928 161 aa9.38□□□□□ -0.91
CMSS1-208ENST00000496116 HMGN3Q15651 99 aa9.38□□□□□ -0.91
CMSS1-208ENST00000496116 ALKBH6Q3KRA9 238 aa9.38□□□□□ -0.91
CMSS1-208ENST00000496116 CTRB2Q6GPI1 263 aa9.38□□□□□ -0.91
CMSS1-208ENST00000496116 C9orf106Q8NAJ2 232 aa9.38□□□□□ -0.91
CMSS1-208ENST00000496116 OR8G5Q8NG78 346 aa9.38□□□□□ -0.91
CMSS1-208ENST00000496116 RNASE11Q8TAA1 199 aaKnown RBP9.38□□□□□ -0.91
CMSS1-208ENST00000496116 PARP12Q9H0J9 701 aaKnown RBP9.38□□□□□ -0.91
CMSS1-208ENST00000496116 MAGT1Q9H0U3 335 aa9.38□□□□□ -0.91
CMSS1-208ENST00000496116 C19orf12Q9NSK7 152 aa9.38□□□□□ -0.91
CMSS1-208ENST00000496116 MBNL3Q9NUK0 354 aaKnown RBP9.38□□□□□ -0.91
CMSS1-208ENST00000496116 OR1A1Q9P1Q5 309 aa9.38□□□□□ -0.91
CMSS1-208ENST00000496116 WIPI2Q9Y4P8 454 aa9.38□□□□□ -0.91
CMSS1-208ENST00000496116 IGSF23A1L1A6 192 aa9.37□□□□□ -0.91
CMSS1-208ENST00000496116 C3orf80F5H4A9 247 aa9.37□□□□□ -0.91
CMSS1-208ENST00000496116 HAND1O96004 215 aa9.37□□□□□ -0.91
CMSS1-208ENST00000496116 PSG2P11465 335 aa9.37□□□□□ -0.91
CMSS1-208ENST00000496116 CLINT1Q14677 625 aa9.37□□□□□ -0.91
CMSS1-208ENST00000496116 PEA15Q15121 130 aa9.37□□□□□ -0.91
CMSS1-208ENST00000496116 DHRS7BQ6IAN0 325 aaPredicted RBP9.37□□□□□ -0.91
CMSS1-208ENST00000496116 VWA1Q6PCB0 445 aa9.37□□□□□ -0.91
CMSS1-208ENST00000496116 BCL2L14Q9BZR8 327 aa9.37□□□□□ -0.91
CMSS1-208ENST00000496116 SH3BGRL3Q9H299 93 aa9.37□□□□□ -0.91
CMSS1-208ENST00000496116 LIN7CQ9NUP9 197 aaKnown RBP9.37□□□□□ -0.91
CMSS1-208ENST00000496116 KCNIP1Q9NZI2 227 aa9.37□□□□□ -0.91
CMSS1-208ENST00000496116 URB1O60287 2271 aaKnown RBP9.37□□□□□ -0.91
CMSS1-208ENST00000496116 ZNF891A8MT65 544 aaPredicted RBP9.37□□□□□ -0.91
CMSS1-208ENST00000496116 UMAD1C9J7I0 102 aa9.37□□□□□ -0.91
CMSS1-208ENST00000496116 H0YL77 283 aa9.37□□□□□ -0.91
CMSS1-208ENST00000496116 OMGP23515 440 aa9.37□□□□□ -0.91
CMSS1-208ENST00000496116 MPV17P39210 176 aa9.37□□□□□ -0.91
CMSS1-208ENST00000496116 CD200P41217 278 aa9.37□□□□□ -0.91
CMSS1-208ENST00000496116 TESK1Q15569 626 aa9.37□□□□□ -0.91
CMSS1-208ENST00000496116 DEFB109BQ30KR1 87 aa9.37□□□□□ -0.91
CMSS1-208ENST00000496116 TMEM88Q6PEY1 159 aa9.37□□□□□ -0.91
CMSS1-208ENST00000496116 TMEM182Q6ZP80 229 aaPredicted RBP9.37□□□□□ -0.91
CMSS1-208ENST00000496116 C1orf174Q8IYL3 243 aa9.37□□□□□ -0.91
CMSS1-208ENST00000496116 LFNGQ8NES3 379 aa9.37□□□□□ -0.91
CMSS1-208ENST00000496116 OR5C1Q8NGR4 320 aa9.37□□□□□ -0.91
CMSS1-208ENST00000496116 PBDC1Q9BVG4 233 aa9.37□□□□□ -0.91
CMSS1-208ENST00000496116 CXXC4Q9H2H0 198 aa9.37□□□□□ -0.91
CMSS1-208ENST00000496116 HES4Q9HCC6 221 aa9.37□□□□□ -0.91
CMSS1-208ENST00000496116 PLSCR4Q9NRQ2 329 aa9.37□□□□□ -0.91
CMSS1-208ENST00000496116 OR14J1Q9UGF5 321 aa9.37□□□□□ -0.91
CMSS1-208ENST00000496116 TINAGQ9UJW2 476 aa9.37□□□□□ -0.91
CMSS1-208ENST00000496116 KCNS2Q9ULS6 477 aa9.37□□□□□ -0.91
CMSS1-208ENST00000496116 KPTNQ9Y664 436 aa9.37□□□□□ -0.91
CMSS1-208ENST00000496116 TMEM30CPA0ZSE6 113 aa9.36□□□□□ -0.91
CMSS1-208ENST00000496116 PROB1E7EW31 1015 aa9.36□□□□□ -0.91
CMSS1-208ENST00000496116 CHST1O43916 411 aa9.36□□□□□ -0.91
CMSS1-208ENST00000496116 WDR1O75083 606 aa9.36□□□□□ -0.91
CMSS1-208ENST00000496116 AGFG2O95081 481 aa9.36□□□□□ -0.91
CMSS1-208ENST00000496116 F12P00748 615 aaPredicted RBP9.36□□□□□ -0.91
CMSS1-208ENST00000496116 WT1P19544 449 aaPredicted RBP9.36□□□□□ -0.91
CMSS1-208ENST00000496116 ASCL1P50553 236 aa9.36□□□□□ -0.91
CMSS1-208ENST00000496116 RPL23AP62750 156 aaKnown RBP9.36□□□□□ -0.91
CMSS1-208ENST00000496116 ACSF3Q4G176 576 aaPredicted RBP9.36□□□□□ -0.91
CMSS1-208ENST00000496116 STX12Q86Y82 276 aa9.36□□□□□ -0.91
CMSS1-208ENST00000496116 ZADH2Q8N4Q0 377 aa9.36□□□□□ -0.91
CMSS1-208ENST00000496116 WDR31Q8NA23 367 aa9.36□□□□□ -0.91
CMSS1-208ENST00000496116 OR2G3Q8NGZ4 309 aa9.36□□□□□ -0.91
CMSS1-208ENST00000496116 LSM10Q969L4 123 aaKnown RBP9.36□□□□□ -0.91
CMSS1-208ENST00000496116 AIFM2Q9BRQ8 373 aa9.36□□□□□ -0.91
CMSS1-208ENST00000496116 NDRG3Q9UGV2 375 aa9.36□□□□□ -0.91
CMSS1-208ENST00000496116 PROCRQ9UNN8 238 aa9.36□□□□□ -0.91
CMSS1-208ENST00000496116 CACNA1HO95180 2353 aa9.36□□□□□ -0.91
CMSS1-208ENST00000496116 TRAV39A0A0B4J263 110 aa9.35□□□□□ -0.91
CMSS1-208ENST00000496116 IGHV3-64DA0A0J9YX35 117 aa9.35□□□□□ -0.91
CMSS1-208ENST00000496116 RNF212BA8MTL3 300 aa9.35□□□□□ -0.91
CMSS1-208ENST00000496116 FAM157AC9JC47 383 aa9.35□□□□□ -0.91
CMSS1-208ENST00000496116 ATP6V1G2-DDX39BF2Z307 99 aa9.35□□□□□ -0.91
CMSS1-208ENST00000496116 H7C2Y5 167 aa9.35□□□□□ -0.91
CMSS1-208ENST00000496116 MLNRO43193 412 aa9.35□□□□□ -0.91
CMSS1-208ENST00000496116 TIMM8AO60220 97 aaPredicted RBP9.35□□□□□ -0.91
CMSS1-208ENST00000496116 HEXAP06865 529 aa9.35□□□□□ -0.91
CMSS1-208ENST00000496116 H2AFB1P0C5Y9 115 aa9.35□□□□□ -0.91
CMSS1-208ENST00000496116 EPHA1P21709 976 aa9.35□□□□□ -0.91
CMSS1-208ENST00000496116 LMO1P25800 156 aa9.35□□□□□ -0.91
CMSS1-208ENST00000496116 ATP6V0CP27449 155 aa9.35□□□□□ -0.91
CMSS1-208ENST00000496116 GCH1P30793 250 aa9.35□□□□□ -0.91
CMSS1-208ENST00000496116 CEACAM6P40199 344 aa9.35□□□□□ -0.91
CMSS1-208ENST00000496116 NPBWR1P48145 328 aa9.35□□□□□ -0.91
CMSS1-208ENST00000496116 FHITP49789 147 aa9.35□□□□□ -0.91
CMSS1-208ENST00000496116 GUK1Q16774 197 aa9.35□□□□□ -0.91
CMSS1-208ENST00000496116 ZNF718Q3SXZ3 478 aa9.35□□□□□ -0.91
CMSS1-208ENST00000496116 GPR146Q96CH1 333 aa9.35□□□□□ -0.91
CMSS1-208ENST00000496116 GNPNAT1Q96EK6 184 aaPredicted RBP9.35□□□□□ -0.91
CMSS1-208ENST00000496116 RAB40CQ96S21 281 aa9.35□□□□□ -0.91
CMSS1-208ENST00000496116 EIF5A2Q9GZV4 153 aaKnown RBP9.35□□□□□ -0.91
CMSS1-208ENST00000496116 PPP1R3CQ9UQK1 317 aa9.35□□□□□ -0.91
CMSS1-208ENST00000496116 RNF115Q9Y4L5 304 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms