RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 IFITM2Q01629 132 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 AESQ08117 197 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 C6orf183Q5T699 404 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 DCAF12L2Q5VW00 463 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 ALKBH2Q6NS38 261 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 TGIF2LYQ8IUE0 185 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 MUC15Q8N387 334 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 C9orf62Q8N4C0 152 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 CLEC18CQ8NCF0 446 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 ZBTB34Q8NCN2 500 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 OR11L1Q8NGX0 322 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 PPP1R35Q8TAP8 253 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 GLYATL2Q8WU03 294 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 RTN4IP1Q8WWV3 396 aaPredicted RBP5.65□□□□□ -1.5
MSH5-217ENST00000494458 WDR89Q96FK6 387 aaPredicted RBP5.65□□□□□ -1.5
MSH5-217ENST00000494458 AKR1E2Q96JD6 320 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 C18orf12Q96KH6 178 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 DMRTB1Q96MA1 342 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 BBC3Q96PG8 261 aaPredicted RBP5.65□□□□□ -1.5
MSH5-217ENST00000494458 GAFA1Q96PS6 74 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 VRK1Q99986 396 aaPredicted RBP5.65□□□□□ -1.5
MSH5-217ENST00000494458 AGMATQ9BSE5 352 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 SUCNR1Q9BXA5 334 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 NMES1Q9C002 83 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 NAA60Q9H7X0 242 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 TAF9BQ9HBM6 251 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 CHMP1AQ9HD42 196 aaPredicted RBP5.65□□□□□ -1.5
MSH5-217ENST00000494458 SLC2A9Q9NRM0 540 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 FAM212BQ9NTI7 297 aaPredicted RBP5.65□□□□□ -1.5
MSH5-217ENST00000494458 KIF25Q9UIL4 384 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 C14orf166Q9Y224 244 aaKnown RBP5.65□□□□□ -1.5
MSH5-217ENST00000494458 ARFGEF3Q5TH69 2177 aa5.65□□□□□ -1.51
MSH5-217ENST00000494458 TRAV14DV4A0A0A6YYC5 116 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 TRAV38-1A0A0B4J264 116 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 TEX13DA0A0J9YY54 714 aaPredicted RBP5.64□□□□□ -1.51
MSH5-217ENST00000494458 A0A1W2PPR1 153 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 ODAMA1E959 279 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 LRRC30A6NM36 301 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 GPR31O00270 319 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 HSPB6O14558 160 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 NDUFA2O43678 99 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 ZG16O60844 167 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 RP2O75695 350 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 C1QL1O75973 258 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 ZNF205O95201 554 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 CDS2O95674 445 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 IFNA2P01563 188 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 HBZP02008 142 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 PI3P19957 117 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 DNASE1P24855 282 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 UCP1P25874 307 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 RBMXP38159 391 aaKnown RBP5.64□□□□□ -1.51
MSH5-217ENST00000494458 NKX2-5P52952 324 aaPredicted RBP5.64□□□□□ -1.51
MSH5-217ENST00000494458 P2RX3P56373 397 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 PIGPP57054 158 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 CCL8P80075 99 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 CYCSP99999 105 aaKnown RBP5.64□□□□□ -1.51
MSH5-217ENST00000494458 MEF2CQ06413 473 aaPredicted RBP5.64□□□□□ -1.51
MSH5-217ENST00000494458 BAMBIQ13145 260 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 SNTB1Q13884 538 aaKnown RBP5.64□□□□□ -1.51
MSH5-217ENST00000494458 ATXN7L3Q14CW9 347 aaPredicted RBP5.64□□□□□ -1.51
MSH5-217ENST00000494458 TMEM30BQ3MIR4 351 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 LGALSLQ3ZCW2 172 aaPredicted RBP5.64□□□□□ -1.51
MSH5-217ENST00000494458 KRBOX4Q5JUW0 171 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 ZNF818PQ6ZRF7 136 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 SGPP2Q8IWX5 399 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 C1orf87Q8N0U7 546 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 ZCCHC24Q8N2G6 241 aaKnown RBP5.64□□□□□ -1.51
MSH5-217ENST00000494458 OR10A7Q8NGE5 316 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 OR5T2Q8NGG2 359 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 OR52M1Q8NGK5 317 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 OR13A1Q8NGR1 328 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 OR2T35Q8NGX2 323 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 OR10J5Q8NHC4 309 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 COQ8AQ8NI60 647 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 NEK7Q8TDX7 302 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 IL22RA2Q969J5 263 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 GALMQ96C23 342 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 C14orf79Q96F83 325 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 KIRREL1Q96J84 757 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 CNTNAP3BQ96NU0 1288 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 CNTNAP3Q9BZ76 1288 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 TMEM222Q9H0R3 208 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 CLEC4MQ9H2X3 399 aaPredicted RBP5.64□□□□□ -1.51
MSH5-217ENST00000494458 ZNF665Q9H7R5 613 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 HEXA-AS1Q9H8Q6 139 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 SAP30LQ9HAJ7 183 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 CBLN4Q9NTU7 201 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 TMEM106BQ9NUM4 274 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 DCAF16Q9NXF7 216 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 OR14J1Q9UGF5 321 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 TRAPPC2LQ9UL33 140 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 KCNIP3Q9Y2W7 256 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 ROS1P08922 2347 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 DSCAMO60469 2012 aa5.64□□□□□ -1.51
MSH5-217ENST00000494458 ICE1Q9Y2F5 2266 aa5.63□□□□□ -1.51
MSH5-217ENST00000494458 PPIAL4EA0A075B759 164 aa5.63□□□□□ -1.51
MSH5-217ENST00000494458 DUXBA0A1W2PPF3 345 aa5.63□□□□□ -1.51
MSH5-217ENST00000494458 PPIAL4DF5H284 164 aa5.63□□□□□ -1.51
MSH5-217ENST00000494458 SMLR1H3BR10 107 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms