RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 NEIL3Q8TAT5 605 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 MRAPQ8TCY5 172 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 TNFRSF13CQ96RJ3 184 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 ULBP2Q9BZM5 246 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 NELFAQ9H3P2 528 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 HHATLQ9HCP6 504 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 SPRR3Q9UBC9 169 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 PRRG2O14669 202 aa9.98□□□□□ -0.81
BRCA1-222ENST00000493919 RAB29O14966 203 aa9.98□□□□□ -0.81
BRCA1-222ENST00000493919 XRCC2O43543 280 aa9.98□□□□□ -0.81
BRCA1-222ENST00000493919 CD74P04233 296 aa9.98□□□□□ -0.81
BRCA1-222ENST00000493919 SLC25A4P12235 298 aa9.98□□□□□ -0.81
BRCA1-222ENST00000493919 PIPP12273 146 aaPredicted RBP9.98□□□□□ -0.81
BRCA1-222ENST00000493919 SLC16A1P53985 500 aa9.98□□□□□ -0.81
BRCA1-222ENST00000493919 PAFAH1B2P68402 229 aa9.98□□□□□ -0.81
BRCA1-222ENST00000493919 SMAGPQ0VAQ4 97 aa9.98□□□□□ -0.81
BRCA1-222ENST00000493919 C3AR1Q16581 482 aa9.98□□□□□ -0.81
BRCA1-222ENST00000493919 Q6ZTK2 550 aa9.98□□□□□ -0.81
BRCA1-222ENST00000493919 LRRC75A-AS1Q8N1F1 130 aa9.98□□□□□ -0.81
BRCA1-222ENST00000493919 BOLLQ8N9W6 283 aaKnown RBP9.98□□□□□ -0.81
BRCA1-222ENST00000493919 PLK3Q9H4B4 646 aa9.98□□□□□ -0.81
BRCA1-222ENST00000493919 ALKBH4Q9NXW9 302 aa9.98□□□□□ -0.81
BRCA1-222ENST00000493919 MED12Q93074 2177 aa9.98□□□□□ -0.81
BRCA1-222ENST00000493919 IGLV3-32A0A0A0MS00 114 aa9.97□□□□□ -0.81
BRCA1-222ENST00000493919 A0A1B0GU03 582 aa9.97□□□□□ -0.81
BRCA1-222ENST00000493919 DBIP07108 87 aaKnown RBP9.97□□□□□ -0.81
BRCA1-222ENST00000493919 CTSDP07339 412 aaPredicted RBP9.97□□□□□ -0.81
BRCA1-222ENST00000493919 MMP7P09237 267 aaPredicted RBP9.97□□□□□ -0.81
BRCA1-222ENST00000493919 TPT1P13693 172 aaKnown RBP9.97□□□□□ -0.81
BRCA1-222ENST00000493919 P2RX1P51575 399 aa9.97□□□□□ -0.81
BRCA1-222ENST00000493919 GNG3P63215 75 aa9.97□□□□□ -0.81
BRCA1-222ENST00000493919 ANKRD55Q3KP44 614 aa9.97□□□□□ -0.81
BRCA1-222ENST00000493919 PODNL1Q6PEZ8 512 aa9.97□□□□□ -0.81
BRCA1-222ENST00000493919 OR52P1PQ8NH57 321 aa9.97□□□□□ -0.81
BRCA1-222ENST00000493919 NRGNQ92686 78 aa9.97□□□□□ -0.81
BRCA1-222ENST00000493919 SARAFQ96BY9 339 aa9.97□□□□□ -0.81
BRCA1-222ENST00000493919 GPR82Q96P67 336 aa9.97□□□□□ -0.81
BRCA1-222ENST00000493919 ZNF471Q9BX82 626 aaPredicted RBP9.97□□□□□ -0.81
BRCA1-222ENST00000493919 ATG5Q9H1Y0 275 aa9.97□□□□□ -0.81
BRCA1-222ENST00000493919 TMEM231Q9H6L2 316 aa9.97□□□□□ -0.81
BRCA1-222ENST00000493919 ELL3Q9HB65 397 aaPredicted RBP9.97□□□□□ -0.81
BRCA1-222ENST00000493919 MRPL16Q9NX20 251 aaKnown RBP9.97□□□□□ -0.81
BRCA1-222ENST00000493919 ZNF586Q9NXT0 402 aa9.97□□□□□ -0.81
BRCA1-222ENST00000493919 TRAPPC2LQ9UL33 140 aa9.97□□□□□ -0.81
BRCA1-222ENST00000493919 ZNF443Q9Y2A4 671 aaPredicted RBP9.97□□□□□ -0.81
BRCA1-222ENST00000493919 CSDC2Q9Y534 153 aaKnown RBP9.97□□□□□ -0.81
BRCA1-222ENST00000493919 DSPPQ9NZW4 1301 aa9.97□□□□□ -0.81
BRCA1-222ENST00000493919 POLEQ07864 2286 aa9.97□□□□□ -0.81
BRCA1-222ENST00000493919 HIVEP3Q5T1R4 2406 aa9.97□□□□□ -0.81
BRCA1-222ENST00000493919 OR12D2P58182 307 aa9.97□□□□□ -0.81
BRCA1-222ENST00000493919 SRPXP78539 464 aa9.97□□□□□ -0.81
BRCA1-222ENST00000493919 MRPS34P82930 218 aaKnown RBP9.97□□□□□ -0.81
BRCA1-222ENST00000493919 MRPL2Q5T653 305 aaKnown RBP9.97□□□□□ -0.81
BRCA1-222ENST00000493919 LYPD4Q6UWN0 246 aa9.97□□□□□ -0.81
BRCA1-222ENST00000493919 MRGPRGQ86SM5 289 aa9.97□□□□□ -0.81
BRCA1-222ENST00000493919 LSRQ86X29 649 aaPredicted RBP9.97□□□□□ -0.81
BRCA1-222ENST00000493919 TCTEX1D1Q8N7M0 179 aa9.97□□□□□ -0.81
BRCA1-222ENST00000493919 FAM57AQ8TBR7 257 aa9.97□□□□□ -0.81
BRCA1-222ENST00000493919 ZNF775Q96BV0 537 aaPredicted RBP9.97□□□□□ -0.81
BRCA1-222ENST00000493919 NEIL1Q96FI4 390 aaPredicted RBP9.97□□□□□ -0.81
BRCA1-222ENST00000493919 GPA33Q99795 319 aa9.97□□□□□ -0.81
BRCA1-222ENST00000493919 OR52D1Q9H346 318 aa9.97□□□□□ -0.81
BRCA1-222ENST00000493919 GCM1Q9NP62 436 aa9.97□□□□□ -0.81
BRCA1-222ENST00000493919 NOX4Q9NPH5 578 aa9.97□□□□□ -0.81
BRCA1-222ENST00000493919 CA10Q9NS85 328 aa9.97□□□□□ -0.81
BRCA1-222ENST00000493919 ASB6Q9NWX5 421 aa9.97□□□□□ -0.81
BRCA1-222ENST00000493919 TAS2R8Q9NYW2 309 aa9.97□□□□□ -0.81
BRCA1-222ENST00000493919 MRPS16Q9Y3D3 137 aaKnown RBP9.97□□□□□ -0.81
BRCA1-222ENST00000493919 PCNX3Q9H6A9 2034 aa9.96□□□□□ -0.81
BRCA1-222ENST00000493919 IGHV1-69-2A0A0G2JMI3 117 aa9.96□□□□□ -0.81
BRCA1-222ENST00000493919 AGPAT2O15120 278 aa9.96□□□□□ -0.81
BRCA1-222ENST00000493919 RPS4Y1P22090 263 aaKnown RBP9.96□□□□□ -0.81
BRCA1-222ENST00000493919 CDKN1AP38936 164 aa9.96□□□□□ -0.81
BRCA1-222ENST00000493919 FOXF1Q12946 379 aa9.96□□□□□ -0.81
BRCA1-222ENST00000493919 MLLT11Q13015 90 aaPredicted RBP9.96□□□□□ -0.81
BRCA1-222ENST00000493919 GABRA6Q16445 453 aa9.96□□□□□ -0.81
BRCA1-222ENST00000493919 FAHD1Q6P587 224 aa9.96□□□□□ -0.81
BRCA1-222ENST00000493919 NPEPL1Q8NDH3 523 aa9.96□□□□□ -0.81
BRCA1-222ENST00000493919 ABHD5Q8WTS1 349 aa9.96□□□□□ -0.81
BRCA1-222ENST00000493919 RAB9BQ9NP90 201 aa9.96□□□□□ -0.81
BRCA1-222ENST00000493919 RLIMQ9NVW2 624 aa9.96□□□□□ -0.81
BRCA1-222ENST00000493919 UQCR10Q9UDW1 63 aa9.96□□□□□ -0.81
BRCA1-222ENST00000493919 ICAM5Q9UMF0 924 aa9.96□□□□□ -0.81
BRCA1-222ENST00000493919 LRRK2Q5S007 2527 aa9.96□□□□□ -0.82
BRCA1-222ENST00000493919 GTF3C1Q12789 2109 aa9.96□□□□□ -0.82
BRCA1-222ENST00000493919 FIGNL2A6NMB9 653 aa9.95□□□□□ -0.82
BRCA1-222ENST00000493919 ZIC3O60481 467 aa9.95□□□□□ -0.82
BRCA1-222ENST00000493919 AGFG2O95081 481 aa9.95□□□□□ -0.82
BRCA1-222ENST00000493919 RCBTB2O95199 551 aa9.95□□□□□ -0.82
BRCA1-222ENST00000493919 CA7P43166 264 aa9.95□□□□□ -0.82
BRCA1-222ENST00000493919 UCP3P55916 312 aa9.95□□□□□ -0.82
BRCA1-222ENST00000493919 TAS2R30P59541 319 aa9.95□□□□□ -0.82
BRCA1-222ENST00000493919 SRYQ05066 204 aa9.95□□□□□ -0.82
BRCA1-222ENST00000493919 TNXAQ16473 311 aa9.95□□□□□ -0.82
BRCA1-222ENST00000493919 MST1LQ2TV78 715 aa9.95□□□□□ -0.82
BRCA1-222ENST00000493919 PNKDQ8N490 385 aa9.95□□□□□ -0.82
BRCA1-222ENST00000493919 OR4D11Q8NGI4 311 aa9.95□□□□□ -0.82
BRCA1-222ENST00000493919 ZNF563Q8TA94 476 aa9.95□□□□□ -0.82
BRCA1-222ENST00000493919 FRZBQ92765 325 aa9.95□□□□□ -0.82
BRCA1-222ENST00000493919 ATF6BQ99941 703 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms