RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 SLC7A5P1Q8MH63 180 aa8.46□□□□□ -1.06
PRPF3-206ENST00000493553 TCTEX1D1Q8N7M0 179 aa8.46□□□□□ -1.06
PRPF3-206ENST00000493553 NUP37Q8NFH4 326 aa8.46□□□□□ -1.06
PRPF3-206ENST00000493553 MRPL30Q8TCC3 161 aaKnown RBP8.46□□□□□ -1.06
PRPF3-206ENST00000493553 DCUN1D4Q92564 292 aa8.46□□□□□ -1.06
PRPF3-206ENST00000493553 RDH5Q92781 318 aa8.46□□□□□ -1.06
PRPF3-206ENST00000493553 SEC22AQ96IW7 307 aa8.46□□□□□ -1.06
PRPF3-206ENST00000493553 ARPC5LQ9BPX5 153 aa8.46□□□□□ -1.06
PRPF3-206ENST00000493553 VKORC1Q9BQB6 163 aa8.46□□□□□ -1.06
PRPF3-206ENST00000493553 C1QTNF6Q9BXI9 259 aa8.46□□□□□ -1.06
PRPF3-206ENST00000493553 SLC5A7Q9GZV3 580 aa8.46□□□□□ -1.06
PRPF3-206ENST00000493553 TMEM222Q9H0R3 208 aa8.46□□□□□ -1.06
PRPF3-206ENST00000493553 SLC25A32Q9H2D1 315 aa8.46□□□□□ -1.06
PRPF3-206ENST00000493553 TINAGQ9UJW2 476 aa8.46□□□□□ -1.06
PRPF3-206ENST00000493553 TRAPPC2LQ9UL33 140 aa8.46□□□□□ -1.06
PRPF3-206ENST00000493553 UBE2J1Q9Y385 318 aaPredicted RBP8.46□□□□□ -1.06
PRPF3-206ENST00000493553 WIPI2Q9Y4P8 454 aa8.46□□□□□ -1.06
PRPF3-206ENST00000493553 SESN1Q9Y6P5 492 aa8.46□□□□□ -1.06
PRPF3-206ENST00000493553 INTS1Q8N201 2190 aaKnown RBP8.46□□□□□ -1.06
PRPF3-206ENST00000493553 IGLV3-9A0A075B6K5 115 aa8.45□□□□□ -1.06
PRPF3-206ENST00000493553 C3orf85A0A1B0GTC6 90 aa8.45□□□□□ -1.06
PRPF3-206ENST00000493553 OOEPA6NGQ2 149 aa8.45□□□□□ -1.06
PRPF3-206ENST00000493553 E5RGE8 158 aa8.45□□□□□ -1.06
PRPF3-206ENST00000493553 F8VVB4 439 aa8.45□□□□□ -1.06
PRPF3-206ENST00000493553 F8VWA3 439 aa8.45□□□□□ -1.06
PRPF3-206ENST00000493553 M0R1B8 84 aa8.45□□□□□ -1.06
PRPF3-206ENST00000493553 SLC33A1O00400 549 aaPredicted RBP8.45□□□□□ -1.06
PRPF3-206ENST00000493553 CCSO14618 274 aa8.45□□□□□ -1.06
PRPF3-206ENST00000493553 BET1O15155 118 aa8.45□□□□□ -1.06
PRPF3-206ENST00000493553 SLC25A6P12236 298 aa8.45□□□□□ -1.06
PRPF3-206ENST00000493553 TPT1P13693 172 aaKnown RBP8.45□□□□□ -1.06
PRPF3-206ENST00000493553 PVALBP20472 110 aaPredicted RBP8.45□□□□□ -1.06
PRPF3-206ENST00000493553 LUMP51884 338 aaPredicted RBP8.45□□□□□ -1.06
PRPF3-206ENST00000493553 SLURP1P55000 103 aa8.45□□□□□ -1.06
PRPF3-206ENST00000493553 NKX6-1P78426 367 aaPredicted RBP8.45□□□□□ -1.06
PRPF3-206ENST00000493553 IL15RAQ13261 267 aa8.45□□□□□ -1.06
PRPF3-206ENST00000493553 DAZAP2Q15038 168 aaPredicted RBP8.45□□□□□ -1.06
PRPF3-206ENST00000493553 TSC22D1Q15714 1073 aa8.45□□□□□ -1.06
PRPF3-206ENST00000493553 TMEM30BQ3MIR4 351 aa8.45□□□□□ -1.06
PRPF3-206ENST00000493553 FAM209AQ5JX71 171 aa8.45□□□□□ -1.06
PRPF3-206ENST00000493553 ETV3LQ6ZN32 361 aa8.45□□□□□ -1.06
PRPF3-206ENST00000493553 ACP7Q6ZNF0 438 aa8.45□□□□□ -1.06
PRPF3-206ENST00000493553 MYPOPQ86VE0 399 aaPredicted RBP8.45□□□□□ -1.06
PRPF3-206ENST00000493553 PDZD9Q8IXQ8 264 aa8.45□□□□□ -1.06
PRPF3-206ENST00000493553 H1FOOQ8IZA3 346 aaPredicted RBP8.45□□□□□ -1.06
PRPF3-206ENST00000493553 CISD2Q8N5K1 135 aaKnown RBP8.45□□□□□ -1.06
PRPF3-206ENST00000493553 SYT8Q8NBV8 401 aa8.45□□□□□ -1.06
PRPF3-206ENST00000493553 STOML3Q8TAV4 291 aa8.45□□□□□ -1.06
PRPF3-206ENST00000493553 RND1Q92730 232 aa8.45□□□□□ -1.06
PRPF3-206ENST00000493553 TMEM56Q96MV1 263 aa8.45□□□□□ -1.06
PRPF3-206ENST00000493553 AQP10Q96PS8 301 aa8.45□□□□□ -1.06
PRPF3-206ENST00000493553 FAM212BQ9NTI7 297 aaPredicted RBP8.45□□□□□ -1.06
PRPF3-206ENST00000493553 RDH8Q9NYR8 311 aa8.45□□□□□ -1.06
PRPF3-206ENST00000493553 MBD2Q9UBB5 411 aa8.45□□□□□ -1.06
PRPF3-206ENST00000493553 PFDN2Q9UHV9 154 aa8.45□□□□□ -1.06
PRPF3-206ENST00000493553 NSG2Q9Y328 171 aa8.45□□□□□ -1.06
PRPF3-206ENST00000493553 TMEM56-RWDD3S4R434 201 aa8.45□□□□□ -1.06
PRPF3-206ENST00000493553 hCG_1807616A0A1W2PRN6 198 aa8.44□□□□□ -1.06
PRPF3-206ENST00000493553 F5H0A9 414 aaPredicted RBP8.44□□□□□ -1.06
PRPF3-206ENST00000493553 H0Y980 276 aa8.44□□□□□ -1.06
PRPF3-206ENST00000493553 HSPA12AO43301 675 aa8.44□□□□□ -1.06
PRPF3-206ENST00000493553 RHBDL1O75783 438 aa8.44□□□□□ -1.06
PRPF3-206ENST00000493553 HOXB5P09067 269 aa8.44□□□□□ -1.06
PRPF3-206ENST00000493553 MMP9P14780 707 aa8.44□□□□□ -1.06
PRPF3-206ENST00000493553 ERVS71-1P61550 626 aa8.44□□□□□ -1.06
PRPF3-206ENST00000493553 KLRB1Q12918 225 aa8.44□□□□□ -1.06
PRPF3-206ENST00000493553 GNMTQ14749 295 aa8.44□□□□□ -1.06
PRPF3-206ENST00000493553 HMGN3Q15651 99 aa8.44□□□□□ -1.06
PRPF3-206ENST00000493553 IGFBP7Q16270 282 aa8.44□□□□□ -1.06
PRPF3-206ENST00000493553 IGSF11Q5DX21 431 aa8.44□□□□□ -1.06
PRPF3-206ENST00000493553 GGNBP1Q5YKI7 109 aa8.44□□□□□ -1.06
PRPF3-206ENST00000493553 THOC7Q6I9Y2 204 aaKnown RBP8.44□□□□□ -1.06
PRPF3-206ENST00000493553 WDR82Q6UXN9 313 aa8.44□□□□□ -1.06
PRPF3-206ENST00000493553 WDR86Q86TI4 376 aa8.44□□□□□ -1.06
PRPF3-206ENST00000493553 ZNF695Q8IW36 515 aa8.44□□□□□ -1.06
PRPF3-206ENST00000493553 FAM71E2Q8N5Q1 922 aa8.44□□□□□ -1.06
PRPF3-206ENST00000493553 LINC00482Q8N8I6 264 aa8.44□□□□□ -1.06
PRPF3-206ENST00000493553 OR5D13Q8NGL4 314 aa8.44□□□□□ -1.06
PRPF3-206ENST00000493553 OR11L1Q8NGX0 322 aa8.44□□□□□ -1.06
PRPF3-206ENST00000493553 NINJ1Q92982 152 aa8.44□□□□□ -1.06
PRPF3-206ENST00000493553 GALMQ96C23 342 aa8.44□□□□□ -1.06
PRPF3-206ENST00000493553 LURAP1Q96LR2 239 aa8.44□□□□□ -1.06
PRPF3-206ENST00000493553 ZNF488Q96MN9 340 aa8.44□□□□□ -1.06
PRPF3-206ENST00000493553 ZNF471Q9BX82 626 aaPredicted RBP8.44□□□□□ -1.06
PRPF3-206ENST00000493553 SHARPINQ9H0F6 387 aa8.44□□□□□ -1.06
PRPF3-206ENST00000493553 DNTTIP1Q9H147 329 aa8.44□□□□□ -1.06
PRPF3-206ENST00000493553 JKAMPQ9P055 326 aa8.44□□□□□ -1.06
PRPF3-206ENST00000493553 GSKIPQ9P0R6 139 aa8.44□□□□□ -1.06
PRPF3-206ENST00000493553 RNF222A6NCQ9 220 aa8.43□□□□□ -1.06
PRPF3-206ENST00000493553 SRRM5B3KS81 715 aa8.43□□□□□ -1.06
PRPF3-206ENST00000493553 K7EPK0 472 aa8.43□□□□□ -1.06
PRPF3-206ENST00000493553 SIRPB1O00241 398 aa8.43□□□□□ -1.06
PRPF3-206ENST00000493553 ST8SIA3O43173 380 aa8.43□□□□□ -1.06
PRPF3-206ENST00000493553 PHF1O43189 567 aaPredicted RBP8.43□□□□□ -1.06
PRPF3-206ENST00000493553 MLNRO43193 412 aa8.43□□□□□ -1.06
PRPF3-206ENST00000493553 SPINT2O43291 252 aa8.43□□□□□ -1.06
PRPF3-206ENST00000493553 ADAP1O75689 374 aa8.43□□□□□ -1.06
PRPF3-206ENST00000493553 WISP2O76076 250 aa8.43□□□□□ -1.06
PRPF3-206ENST00000493553 SERPINE2P07093 398 aa8.43□□□□□ -1.06
PRPF3-206ENST00000493553 ADH4P08319 380 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms