RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 RAB12Q6IQ22 244 aa6.56□□□□□ -1.36
LSM2-213ENST00000491421 LAIR2Q6ISS4 152 aa6.56□□□□□ -1.36
LSM2-213ENST00000491421 C10orf99Q6UWK7 81 aa6.56□□□□□ -1.36
LSM2-213ENST00000491421 MOB3BQ86TA1 216 aa6.56□□□□□ -1.36
LSM2-213ENST00000491421 CDH26Q8IXH8 852 aa6.56□□□□□ -1.36
LSM2-213ENST00000491421 NKAIN3Q8N8D7 197 aa6.56□□□□□ -1.36
LSM2-213ENST00000491421 C5orf56Q8N8D9 126 aa6.56□□□□□ -1.36
LSM2-213ENST00000491421 C8orf31Q8N9H6 132 aa6.56□□□□□ -1.36
LSM2-213ENST00000491421 FBLIM1Q8WUP2 373 aa6.56□□□□□ -1.36
LSM2-213ENST00000491421 THRSPQ92748 146 aa6.56□□□□□ -1.36
LSM2-213ENST00000491421 PHF21AQ96BD5 680 aa6.56□□□□□ -1.36
LSM2-213ENST00000491421 MRPS24Q96EL2 167 aaKnown RBP6.56□□□□□ -1.36
LSM2-213ENST00000491421 SELENOIQ9C0D9 397 aa6.56□□□□□ -1.36
LSM2-213ENST00000491421 BANF2Q9H503 90 aa6.56□□□□□ -1.36
LSM2-213ENST00000491421 RAB9BQ9NP90 201 aa6.56□□□□□ -1.36
LSM2-213ENST00000491421 PLCXD1Q9NUJ7 323 aa6.56□□□□□ -1.36
LSM2-213ENST00000491421 NECAP2Q9NVZ3 263 aa6.56□□□□□ -1.36
LSM2-213ENST00000491421 GFOD1Q9NXC2 390 aa6.56□□□□□ -1.36
LSM2-213ENST00000491421 ETAA1Q9NY74 926 aa6.56□□□□□ -1.36
LSM2-213ENST00000491421 RCC2Q9P258 522 aaKnown RBP6.56□□□□□ -1.36
LSM2-213ENST00000491421 TRAPPC2LQ9UL33 140 aa6.56□□□□□ -1.36
LSM2-213ENST00000491421 ERGIC3Q9Y282 383 aa6.56□□□□□ -1.36
LSM2-213ENST00000491421 IGHV3-43A0A0B4J1X8 118 aa6.55□□□□□ -1.36
LSM2-213ENST00000491421 IGHV3-72A0A0B4J1Y9 119 aa6.55□□□□□ -1.36
LSM2-213ENST00000491421 FAM90A10PA6NDY2 464 aa6.55□□□□□ -1.36
LSM2-213ENST00000491421 FAM90A7PA6NKC0 464 aa6.55□□□□□ -1.36
LSM2-213ENST00000491421 SERPINE3A8MV23 424 aa6.55□□□□□ -1.36
LSM2-213ENST00000491421 FAM90A23PA8MXZ1 464 aa6.55□□□□□ -1.36
LSM2-213ENST00000491421 C12orf77C9JDV5 145 aa6.55□□□□□ -1.36
LSM2-213ENST00000491421 PIN1P1O15428 100 aa6.55□□□□□ -1.36
LSM2-213ENST00000491421 SPINT2O43291 252 aa6.55□□□□□ -1.36
LSM2-213ENST00000491421 FGF16O43320 207 aa6.55□□□□□ -1.36
LSM2-213ENST00000491421 CRTAPO75718 401 aaPredicted RBP6.55□□□□□ -1.36
LSM2-213ENST00000491421 CD1AP06126 327 aa6.55□□□□□ -1.36
LSM2-213ENST00000491421 IGHV3-43DP0DP04 118 aa6.55□□□□□ -1.36
LSM2-213ENST00000491421 IGLL1P15814 213 aa6.55□□□□□ -1.36
LSM2-213ENST00000491421 MGMTP16455 207 aa6.55□□□□□ -1.36
LSM2-213ENST00000491421 IL3RAP26951 378 aa6.55□□□□□ -1.36
LSM2-213ENST00000491421 LOXL3P58215 753 aa6.55□□□□□ -1.36
LSM2-213ENST00000491421 GPR50Q13585 617 aa6.55□□□□□ -1.36
LSM2-213ENST00000491421 TMEM30BQ3MIR4 351 aa6.55□□□□□ -1.36
LSM2-213ENST00000491421 C6orf183Q5T699 404 aa6.55□□□□□ -1.36
LSM2-213ENST00000491421 SYT6Q5T7P8 510 aaPredicted RBP6.55□□□□□ -1.36
LSM2-213ENST00000491421 FAM53AQ6NSI3 398 aaPredicted RBP6.55□□□□□ -1.36
LSM2-213ENST00000491421 Q6ZPA2 131 aa6.55□□□□□ -1.36
LSM2-213ENST00000491421 ZNF329Q86UD4 541 aa6.55□□□□□ -1.36
LSM2-213ENST00000491421 IZUMO1Q8IYV9 350 aa6.55□□□□□ -1.36
LSM2-213ENST00000491421 PRR18Q8N4B5 295 aa6.55□□□□□ -1.36
LSM2-213ENST00000491421 LINC00311Q8N616 119 aa6.55□□□□□ -1.36
LSM2-213ENST00000491421 NANOGP1Q8N7R0 232 aa6.55□□□□□ -1.36
LSM2-213ENST00000491421 TMEM104Q8NE00 496 aa6.55□□□□□ -1.36
LSM2-213ENST00000491421 WFDC9Q8NEX5 89 aa6.55□□□□□ -1.36
LSM2-213ENST00000491421 OR4K15Q8NH41 348 aa6.55□□□□□ -1.36
LSM2-213ENST00000491421 CHPT1Q8WUD6 406 aa6.55□□□□□ -1.36
LSM2-213ENST00000491421 TFAP2CQ92754 450 aa6.55□□□□□ -1.36
LSM2-213ENST00000491421 UQCC2Q9BRT2 126 aa6.55□□□□□ -1.36
LSM2-213ENST00000491421 MND1Q9BWT6 205 aa6.55□□□□□ -1.36
LSM2-213ENST00000491421 FKBP14Q9NWM8 211 aa6.55□□□□□ -1.36
LSM2-213ENST00000491421 GNG12Q9UBI6 72 aa6.55□□□□□ -1.36
LSM2-213ENST00000491421 PEX16Q9Y5Y5 336 aa6.55□□□□□ -1.36
LSM2-213ENST00000491421 UBE2QL1A1L167 161 aa6.54□□□□□ -1.36
LSM2-213ENST00000491421 NCBP2LA6PVI3 153 aaKnown RBP6.54□□□□□ -1.36
LSM2-213ENST00000491421 ANKRD65E5RJM6 399 aa6.54□□□□□ -1.36
LSM2-213ENST00000491421 CA11O75493 328 aa6.54□□□□□ -1.36
LSM2-213ENST00000491421 HBZP02008 142 aa6.54□□□□□ -1.36
LSM2-213ENST00000491421 GLAP06280 429 aa6.54□□□□□ -1.36
LSM2-213ENST00000491421 FUT3P21217 361 aa6.54□□□□□ -1.36
LSM2-213ENST00000491421 VHLP40337 213 aa6.54□□□□□ -1.36
LSM2-213ENST00000491421 SLC35A2P78381 396 aa6.54□□□□□ -1.36
LSM2-213ENST00000491421 SLC35B1P78383 322 aa6.54□□□□□ -1.36
LSM2-213ENST00000491421 GABPB1Q06547 395 aaPredicted RBP6.54□□□□□ -1.36
LSM2-213ENST00000491421 EBI3Q14213 229 aa6.54□□□□□ -1.36
LSM2-213ENST00000491421 INSL4Q14641 139 aa6.54□□□□□ -1.36
LSM2-213ENST00000491421 Q3ZCU0 254 aa6.54□□□□□ -1.36
LSM2-213ENST00000491421 FOXB2Q5VYV0 432 aa6.54□□□□□ -1.36
LSM2-213ENST00000491421 TRAT1Q6PIZ9 186 aa6.54□□□□□ -1.36
LSM2-213ENST00000491421 SLC35E3Q7Z769 313 aa6.54□□□□□ -1.36
LSM2-213ENST00000491421 LYPD6Q86Y78 171 aa6.54□□□□□ -1.36
LSM2-213ENST00000491421 FOXRED2Q8IWF2 684 aa6.54□□□□□ -1.36
LSM2-213ENST00000491421 GAPTQ8N292 157 aa6.54□□□□□ -1.36
LSM2-213ENST00000491421 OR10V1Q8NGI7 309 aa6.54□□□□□ -1.36
LSM2-213ENST00000491421 OR2T10Q8NGZ9 312 aa6.54□□□□□ -1.36
LSM2-213ENST00000491421 OR1L1Q8NH94 360 aa6.54□□□□□ -1.36
LSM2-213ENST00000491421 MRAPQ8TCY5 172 aa6.54□□□□□ -1.36
LSM2-213ENST00000491421 RTN4IP1Q8WWV3 396 aaPredicted RBP6.54□□□□□ -1.36
LSM2-213ENST00000491421 FAM46BQ96A09 425 aa6.54□□□□□ -1.36
LSM2-213ENST00000491421 Q96M66 194 aa6.54□□□□□ -1.36
LSM2-213ENST00000491421 NOL4LQ96MY1 436 aaPredicted RBP6.54□□□□□ -1.36
LSM2-213ENST00000491421 CST11Q9H112 138 aa6.54□□□□□ -1.36
LSM2-213ENST00000491421 AURKAIP1Q9NWT8 199 aaPredicted RBP6.54□□□□□ -1.36
LSM2-213ENST00000491421 GHRLQ9UBU3 117 aa6.54□□□□□ -1.36
LSM2-213ENST00000491421 NOTCH3Q9UM47 2321 aa6.53□□□□□ -1.36
LSM2-213ENST00000491421 PTGES3LE9PB15 166 aa6.53□□□□□ -1.36
LSM2-213ENST00000491421 SLC31A2O15432 143 aa6.53□□□□□ -1.36
LSM2-213ENST00000491421 TXNL1O43396 289 aa6.53□□□□□ -1.36
LSM2-213ENST00000491421 PDCD6O75340 191 aa6.53□□□□□ -1.36
LSM2-213ENST00000491421 SC5DO75845 299 aa6.53□□□□□ -1.36
LSM2-213ENST00000491421 MPIG6BO95866 241 aa6.53□□□□□ -1.36
LSM2-213ENST00000491421 MOSP00540 346 aa6.53□□□□□ -1.36
LSM2-213ENST00000491421 IGHG2P01859 326 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms