RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 TFPI2P48307 235 aa8.48□□□□□ -1.05
ERCC3-208ENST00000491292 THBS3P49746 956 aa8.48□□□□□ -1.05
ERCC3-208ENST00000491292 EDDM3BP56851 147 aa8.48□□□□□ -1.05
ERCC3-208ENST00000491292 HTD2P86397 168 aa8.48□□□□□ -1.05
ERCC3-208ENST00000491292 EIF3IQ13347 325 aaKnown RBP8.48□□□□□ -1.05
ERCC3-208ENST00000491292 ENDOGQ14249 297 aaKnown RBP8.48□□□□□ -1.05
ERCC3-208ENST00000491292 HERPUD1Q15011 391 aa8.48□□□□□ -1.05
ERCC3-208ENST00000491292 PLPPR5Q32ZL2 321 aa8.48□□□□□ -1.05
ERCC3-208ENST00000491292 SPATA46Q5T0L3 261 aa8.48□□□□□ -1.05
ERCC3-208ENST00000491292 DMRTA1Q5VZB9 504 aa8.48□□□□□ -1.05
ERCC3-208ENST00000491292 RHBDD1Q8TEB9 315 aa8.48□□□□□ -1.05
ERCC3-208ENST00000491292 RCC1LQ96I51 464 aaKnown RBP8.48□□□□□ -1.05
ERCC3-208ENST00000491292 CFHR5Q9BXR6 569 aa8.48□□□□□ -1.05
ERCC3-208ENST00000491292 C8orf33Q9H7E9 229 aaPredicted RBP8.48□□□□□ -1.05
ERCC3-208ENST00000491292 PTRH2Q9Y3E5 179 aaKnown RBP8.48□□□□□ -1.05
ERCC3-208ENST00000491292 MTCH2Q9Y6C9 303 aa8.48□□□□□ -1.05
ERCC3-208ENST00000491292 TRIOBPQ9H2D6 2365 aa8.48□□□□□ -1.05
ERCC3-208ENST00000491292 IGKV1D-13A0A0B4J2D9 117 aa8.47□□□□□ -1.05
ERCC3-208ENST00000491292 C5orf49A4QMS7 147 aa8.47□□□□□ -1.05
ERCC3-208ENST00000491292 IGKV1-13P0DP09 117 aa8.47□□□□□ -1.05
ERCC3-208ENST00000491292 KITLGP21583 273 aa8.47□□□□□ -1.05
ERCC3-208ENST00000491292 TNFRSF9Q07011 255 aa8.47□□□□□ -1.05
ERCC3-208ENST00000491292 JOSD1Q15040 202 aaPredicted RBP8.47□□□□□ -1.05
ERCC3-208ENST00000491292 ANKRD37Q7Z713 158 aa8.47□□□□□ -1.05
ERCC3-208ENST00000491292 GPR146Q96CH1 333 aa8.47□□□□□ -1.05
ERCC3-208ENST00000491292 OR4C12Q96R67 309 aa8.47□□□□□ -1.05
ERCC3-208ENST00000491292 MYOTQ9UBF9 498 aa8.47□□□□□ -1.05
ERCC3-208ENST00000491292 C19orf25Q9UFG5 118 aaPredicted RBP8.47□□□□□ -1.05
ERCC3-208ENST00000491292 CACNA1GO43497 2377 aa8.47□□□□□ -1.05
ERCC3-208ENST00000491292 IGHMP01871 453 aa8.47□□□□□ -1.05
ERCC3-208ENST00000491292 GYPAP02724 150 aa8.47□□□□□ -1.05
ERCC3-208ENST00000491292 DTYMKP23919 212 aa8.47□□□□□ -1.05
ERCC3-208ENST00000491292 H1FOOQ8IZA3 346 aaPredicted RBP8.47□□□□□ -1.05
ERCC3-208ENST00000491292 OR10G4Q8NGN3 311 aa8.47□□□□□ -1.05
ERCC3-208ENST00000491292 OR10G9Q8NGN4 311 aa8.47□□□□□ -1.05
ERCC3-208ENST00000491292 OR10G7Q8NGN6 311 aa8.47□□□□□ -1.05
ERCC3-208ENST00000491292 C18orf12Q96KH6 178 aa8.47□□□□□ -1.05
ERCC3-208ENST00000491292 NUDT16L1Q9BRJ7 211 aaKnown RBP8.47□□□□□ -1.05
ERCC3-208ENST00000491292 SMDT1Q9H4I9 107 aa8.47□□□□□ -1.05
ERCC3-208ENST00000491292 MMP17Q9ULZ9 603 aa8.47□□□□□ -1.05
ERCC3-208ENST00000491292 OBSL1O75147 1896 aa8.47□□□□□ -1.05
ERCC3-208ENST00000491292 KIR2DS1A0A191URI9 304 aa8.47□□□□□ -1.05
ERCC3-208ENST00000491292 OR6C6A6NF89 314 aa8.47□□□□□ -1.05
ERCC3-208ENST00000491292 PMCHP20382 165 aa8.47□□□□□ -1.05
ERCC3-208ENST00000491292 KIR2DS4P43632 304 aa8.47□□□□□ -1.05
ERCC3-208ENST00000491292 FUT6P51993 359 aa8.47□□□□□ -1.05
ERCC3-208ENST00000491292 KIR2DS1Q14954 304 aa8.47□□□□□ -1.05
ERCC3-208ENST00000491292 ZDHHC23Q8IYP9 409 aa8.47□□□□□ -1.05
ERCC3-208ENST00000491292 KDF1Q8NAX2 398 aaPredicted RBP8.47□□□□□ -1.05
ERCC3-208ENST00000491292 DTD1Q8TEA8 209 aa8.47□□□□□ -1.05
ERCC3-208ENST00000491292 MRPL13Q9BYD1 178 aaKnown RBP8.47□□□□□ -1.05
ERCC3-208ENST00000491292 FBLN5Q9UBX5 448 aa8.47□□□□□ -1.05
ERCC3-208ENST00000491292 LOC102725191A0A1B0GVB3 256 aa8.46□□□□□ -1.05
ERCC3-208ENST00000491292 PGPEP1LA6NFU8 196 aa8.46□□□□□ -1.05
ERCC3-208ENST00000491292 TMEM50AO95807 157 aa8.46□□□□□ -1.05
ERCC3-208ENST00000491292 FGF5P12034 268 aa8.46□□□□□ -1.05
ERCC3-208ENST00000491292 MSX1P28360 303 aa8.46□□□□□ -1.05
ERCC3-208ENST00000491292 PPP1CBP62140 327 aa8.46□□□□□ -1.05
ERCC3-208ENST00000491292 SLC35B1P78383 322 aa8.46□□□□□ -1.05
ERCC3-208ENST00000491292 MRGPRGQ86SM5 289 aa8.46□□□□□ -1.05
ERCC3-208ENST00000491292 IFI44Q8TCB0 444 aa8.46□□□□□ -1.05
ERCC3-208ENST00000491292 RBM14Q96PK6 669 aaKnown RBP8.46□□□□□ -1.05
ERCC3-208ENST00000491292 VAMP8Q9BV40 100 aa8.46□□□□□ -1.05
ERCC3-208ENST00000491292 SDF2L1Q9HCN8 221 aa8.46□□□□□ -1.05
ERCC3-208ENST00000491292 A0A087WWC5 75 aa8.46□□□□□ -1.05
ERCC3-208ENST00000491292 IGHV1OR21-1A0A087WYE8 117 aa8.46□□□□□ -1.05
ERCC3-208ENST00000491292 A0A1B0GU03 582 aa8.46□□□□□ -1.05
ERCC3-208ENST00000491292 CNN1P51911 297 aaKnown RBP8.46□□□□□ -1.05
ERCC3-208ENST00000491292 NUTF2P61970 127 aaKnown RBP8.46□□□□□ -1.05
ERCC3-208ENST00000491292 MEF2BQ02080 365 aaPredicted RBP8.46□□□□□ -1.05
ERCC3-208ENST00000491292 IGFBP7Q16270 282 aa8.46□□□□□ -1.05
ERCC3-208ENST00000491292 TMPRSS7Q7RTY8 843 aa8.46□□□□□ -1.05
ERCC3-208ENST00000491292 LYPD6Q86Y78 171 aa8.46□□□□□ -1.05
ERCC3-208ENST00000491292 NINJ1Q92982 152 aa8.46□□□□□ -1.05
ERCC3-208ENST00000491292 SPACA9Q96E40 222 aaPredicted RBP8.46□□□□□ -1.05
ERCC3-208ENST00000491292 IGKV1-12A0A0C4DH73 117 aa8.46□□□□□ -1.06
ERCC3-208ENST00000491292 IGKV1D-12P01611 117 aa8.46□□□□□ -1.06
ERCC3-208ENST00000491292 PDLIM3Q53GG5 364 aaPredicted RBP8.46□□□□□ -1.06
ERCC3-208ENST00000491292 CMTM2Q8TAZ6 248 aa8.46□□□□□ -1.06
ERCC3-208ENST00000491292 PARLQ9H300 379 aa8.46□□□□□ -1.06
ERCC3-208ENST00000491292 SRD5A3Q9H8P0 318 aa8.46□□□□□ -1.06
ERCC3-208ENST00000491292 NAGKQ9UJ70 344 aa8.46□□□□□ -1.06
ERCC3-208ENST00000491292 POLEQ07864 2286 aa8.46□□□□□ -1.06
ERCC3-208ENST00000491292 SPEGQ15772 3267 aa8.46□□□□□ -1.06
ERCC3-208ENST00000491292 ZDBF2Q9HCK1 2354 aa8.46□□□□□ -1.06
ERCC3-208ENST00000491292 IGKV1-27A0A075B6S5 117 aa8.45□□□□□ -1.06
ERCC3-208ENST00000491292 LOC102724200A0A096LPH7 203 aaPredicted RBP8.45□□□□□ -1.06
ERCC3-208ENST00000491292 KIAA1324LA8MWY0 1029 aaPredicted RBP8.45□□□□□ -1.06
ERCC3-208ENST00000491292 IGHV3-13P01766 116 aa8.45□□□□□ -1.06
ERCC3-208ENST00000491292 IGHV3-7P01780 117 aa8.45□□□□□ -1.06
ERCC3-208ENST00000491292 RPLP1P05386 114 aaKnown RBP8.45□□□□□ -1.06
ERCC3-208ENST00000491292 IFI6P09912 130 aa8.45□□□□□ -1.06
ERCC3-208ENST00000491292 OTX2P32243 289 aa8.45□□□□□ -1.06
ERCC3-208ENST00000491292 TCF23Q7RTU1 214 aa8.45□□□□□ -1.06
ERCC3-208ENST00000491292 OR4D5Q8NGN0 318 aa8.45□□□□□ -1.06
ERCC3-208ENST00000491292 IMMP2LQ96T52 175 aa8.45□□□□□ -1.06
ERCC3-208ENST00000491292 MRPL37Q9BZE1 423 aaKnown RBP8.45□□□□□ -1.06
ERCC3-208ENST00000491292 NCOR1O75376 2440 aa8.45□□□□□ -1.06
ERCC3-208ENST00000491292 PCDH15Q96QU1 1955 aa8.45□□□□□ -1.06
ERCC3-208ENST00000491292 USF3Q68DE3 2245 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms