RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 TCRBV3S1A0A5B6 114 aa6.32□□□□□ -1.4
USP39-216ENST00000490193 MAGEA13PA6NCF6 341 aa6.32□□□□□ -1.4
USP39-216ENST00000490193 OR4C45A6NMZ5 311 aa6.32□□□□□ -1.4
USP39-216ENST00000490193 SULT1B1O43704 296 aa6.32□□□□□ -1.4
USP39-216ENST00000490193 MITFO75030 526 aaPredicted RBP6.32□□□□□ -1.4
USP39-216ENST00000490193 JTBO76095 146 aa6.32□□□□□ -1.4
USP39-216ENST00000490193 HLA-DRB1P01911 266 aa6.32□□□□□ -1.4
USP39-216ENST00000490193 OR8U9P0C7N5 309 aa6.32□□□□□ -1.4
USP39-216ENST00000490193 T-ENOLP0DO92 83 aa6.32□□□□□ -1.4
USP39-216ENST00000490193 CALB2P22676 271 aa6.32□□□□□ -1.4
USP39-216ENST00000490193 RAB9AP51151 201 aa6.32□□□□□ -1.4
USP39-216ENST00000490193 GABPB1Q06547 395 aaPredicted RBP6.32□□□□□ -1.4
USP39-216ENST00000490193 TMEM30BQ3MIR4 351 aa6.32□□□□□ -1.4
USP39-216ENST00000490193 C19orf54Q5BKX5 351 aa6.32□□□□□ -1.4
USP39-216ENST00000490193 NHLRC3Q5JS37 347 aa6.32□□□□□ -1.4
USP39-216ENST00000490193 ZNF691Q5VV52 312 aa6.32□□□□□ -1.4
USP39-216ENST00000490193 KDM4DQ6B0I6 523 aa6.32□□□□□ -1.4
USP39-216ENST00000490193 FAM53AQ6NSI3 398 aaPredicted RBP6.32□□□□□ -1.4
USP39-216ENST00000490193 ASCL4Q6XD76 172 aa6.32□□□□□ -1.4
USP39-216ENST00000490193 SLC25A48Q6ZT89 311 aaKnown RBP6.32□□□□□ -1.4
USP39-216ENST00000490193 PARP16Q8N5Y8 322 aa6.32□□□□□ -1.4
USP39-216ENST00000490193 MINDY2Q8NBR6 621 aa6.32□□□□□ -1.4
USP39-216ENST00000490193 ZNF439Q8NDP4 499 aa6.32□□□□□ -1.4
USP39-216ENST00000490193 OR13C3Q8NGS6 347 aa6.32□□□□□ -1.4
USP39-216ENST00000490193 CPNE2Q96FN4 548 aaPredicted RBP6.32□□□□□ -1.4
USP39-216ENST00000490193 GHITMQ9H3K2 345 aa6.32□□□□□ -1.4
USP39-216ENST00000490193 GFOD1Q9NXC2 390 aa6.32□□□□□ -1.4
USP39-216ENST00000490193 ENOPH1Q9UHY7 261 aa6.32□□□□□ -1.4
USP39-216ENST00000490193 MRPS28Q9Y2Q9 187 aaKnown RBP6.32□□□□□ -1.4
USP39-216ENST00000490193 ALMS1Q8TCU4 4167 aa6.32□□□□□ -1.4
USP39-216ENST00000490193 hCG_2014768A0A024R1R8 64 aa6.31□□□□□ -1.4
USP39-216ENST00000490193 TRAV39A0A0B4J263 110 aa6.31□□□□□ -1.4
USP39-216ENST00000490193 TMEM30CPA0ZSE6 113 aa6.31□□□□□ -1.4
USP39-216ENST00000490193 LINC01619G3V211 115 aa6.31□□□□□ -1.4
USP39-216ENST00000490193 G3V318 75 aa6.31□□□□□ -1.4
USP39-216ENST00000490193 J3QRE1 110 aa6.31□□□□□ -1.4
USP39-216ENST00000490193 SDCBPO00560 298 aaPredicted RBP6.31□□□□□ -1.4
USP39-216ENST00000490193 ATP6V0E1O15342 81 aa6.31□□□□□ -1.4
USP39-216ENST00000490193 SLC16A6O15403 523 aa6.31□□□□□ -1.4
USP39-216ENST00000490193 HSPA12AO43301 675 aa6.31□□□□□ -1.4
USP39-216ENST00000490193 ORC5O43913 435 aa6.31□□□□□ -1.4
USP39-216ENST00000490193 RPSAP08865 295 aaKnown RBP6.31□□□□□ -1.4
USP39-216ENST00000490193 HTR1AP08908 422 aa6.31□□□□□ -1.4
USP39-216ENST00000490193 LGALS1P09382 135 aaKnown RBP6.31□□□□□ -1.4
USP39-216ENST00000490193 ATP6V1E1P36543 226 aa6.31□□□□□ -1.4
USP39-216ENST00000490193 CRIP2P52943 208 aaPredicted RBP6.31□□□□□ -1.4
USP39-216ENST00000490193 SLURP1P55000 103 aa6.31□□□□□ -1.4
USP39-216ENST00000490193 LSAMPQ13449 338 aa6.31□□□□□ -1.4
USP39-216ENST00000490193 SRSF7Q16629 238 aaKnown RBP eCLIP6.31□□□□□ -1.4
USP39-216ENST00000490193 PIGYQ3MUY2 71 aa6.31□□□□□ -1.4
USP39-216ENST00000490193 STEAP3Q658P3 488 aa6.31□□□□□ -1.4
USP39-216ENST00000490193 ZNF529Q6P280 563 aa6.31□□□□□ -1.4
USP39-216ENST00000490193 SERPINA12Q8IW75 414 aa6.31□□□□□ -1.4
USP39-216ENST00000490193 SUMF2Q8NBJ7 301 aa6.31□□□□□ -1.4
USP39-216ENST00000490193 OR5D14Q8NGL3 314 aa6.31□□□□□ -1.4
USP39-216ENST00000490193 OR8J1Q8NGP2 316 aa6.31□□□□□ -1.4
USP39-216ENST00000490193 RFKQ969G6 155 aa6.31□□□□□ -1.4
USP39-216ENST00000490193 ARL11Q969Q4 196 aa6.31□□□□□ -1.4
USP39-216ENST00000490193 EME1Q96AY2 570 aa6.31□□□□□ -1.4
USP39-216ENST00000490193 OR5B12Q96R08 314 aa6.31□□□□□ -1.4
USP39-216ENST00000490193 NR1H4Q96RI1 486 aaPredicted RBP6.31□□□□□ -1.4
USP39-216ENST00000490193 MYCBPQ99417 103 aaPredicted RBP6.31□□□□□ -1.4
USP39-216ENST00000490193 SPATA25Q9BR10 227 aa6.31□□□□□ -1.4
USP39-216ENST00000490193 DPCDQ9BVM2 203 aaPredicted RBP6.31□□□□□ -1.4
USP39-216ENST00000490193 TOLLIPQ9H0E2 274 aa6.31□□□□□ -1.4
USP39-216ENST00000490193 GABARAPL1Q9H0R8 117 aa6.31□□□□□ -1.4
USP39-216ENST00000490193 WSB1Q9Y6I7 421 aa6.31□□□□□ -1.4
USP39-216ENST00000490193 IGHV4OR15-8A0A075B7B6 117 aa6.3□□□□□ -1.4
USP39-216ENST00000490193 A0A087WW49 117 aa6.3□□□□□ -1.4
USP39-216ENST00000490193 IGHV7-81A0A0B4J1V7 117 aa6.3□□□□□ -1.4
USP39-216ENST00000490193 TRAV41A0A0B4J266 112 aa6.3□□□□□ -1.4
USP39-216ENST00000490193 GABRPO00591 440 aa6.3□□□□□ -1.4
USP39-216ENST00000490193 ARPC1BO15143 372 aaKnown RBP6.3□□□□□ -1.4
USP39-216ENST00000490193 SLC31A2O15432 143 aa6.3□□□□□ -1.4
USP39-216ENST00000490193 LANCL1O43813 399 aa6.3□□□□□ -1.4
USP39-216ENST00000490193 IGLV1-51P01701 117 aa6.3□□□□□ -1.4
USP39-216ENST00000490193 SLC2A2P11168 524 aaPredicted RBP6.3□□□□□ -1.4
USP39-216ENST00000490193 MYF6P23409 242 aa6.3□□□□□ -1.4
USP39-216ENST00000490193 PITPNAQ00169 270 aa6.3□□□□□ -1.4
USP39-216ENST00000490193 ALKBH1Q13686 389 aaKnown RBP6.3□□□□□ -1.4
USP39-216ENST00000490193 FLOT2Q14254 428 aa6.3□□□□□ -1.4
USP39-216ENST00000490193 MMDQ15546 238 aa6.3□□□□□ -1.4
USP39-216ENST00000490193 ZSCAN26Q16670 478 aa6.3□□□□□ -1.4
USP39-216ENST00000490193 ZNF497Q6ZNH5 498 aa6.3□□□□□ -1.4
USP39-216ENST00000490193 LINC00596Q86U02 117 aa6.3□□□□□ -1.4
USP39-216ENST00000490193 SPATA24Q86W54 205 aa6.3□□□□□ -1.4
USP39-216ENST00000490193 SGPP2Q8IWX5 399 aa6.3□□□□□ -1.4
USP39-216ENST00000490193 ARPC1AQ92747 370 aa6.3□□□□□ -1.4
USP39-216ENST00000490193 PELI1Q96FA3 418 aa6.3□□□□□ -1.4
USP39-216ENST00000490193 THTPAQ9BU02 230 aa6.3□□□□□ -1.4
USP39-216ENST00000490193 ALX4Q9H161 411 aaPredicted RBP6.3□□□□□ -1.4
USP39-216ENST00000490193 IL36GQ9NZH8 169 aa6.3□□□□□ -1.4
USP39-216ENST00000490193 ZNF581Q9P0T4 197 aa6.3□□□□□ -1.4
USP39-216ENST00000490193 TNCP24821 2201 aa6.29□□□□□ -1.4
USP39-216ENST00000490193 IGHV3-43A0A0B4J1X8 118 aa6.29□□□□□ -1.4
USP39-216ENST00000490193 A6NJY4 79 aa6.29□□□□□ -1.4
USP39-216ENST00000490193 G3V2T6 193 aa6.29□□□□□ -1.4
USP39-216ENST00000490193 SOX15O60248 233 aa6.29□□□□□ -1.4
USP39-216ENST00000490193 OR7C1O76099 320 aaPredicted RBP6.29□□□□□ -1.4
USP39-216ENST00000490193 NDUFA3O95167 84 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms