RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 A0A1B0GX30 115 aa13.15□□□□□ -0.3
CLIC4-203ENST00000489758 hCG_1809904A0A1W2PP81 198 aa13.15□□□□□ -0.3
CLIC4-203ENST00000489758 A0A1W2PPE2 198 aa13.15□□□□□ -0.3
CLIC4-203ENST00000489758 A0A1W2PR64 198 aa13.15□□□□□ -0.3
CLIC4-203ENST00000489758 A0A1W2PRV1 198 aa13.15□□□□□ -0.3
CLIC4-203ENST00000489758 TRDCB7Z8K6 153 aa13.15□□□□□ -0.3
CLIC4-203ENST00000489758 RNASEK-C17orf49H0YIS7 233 aa13.15□□□□□ -0.3
CLIC4-203ENST00000489758 SCTP09683 121 aa13.15□□□□□ -0.3
CLIC4-203ENST00000489758 HOXB4P17483 251 aaPredicted RBP13.15□□□□□ -0.3
CLIC4-203ENST00000489758 FPR2P25090 351 aa13.15□□□□□ -0.3
CLIC4-203ENST00000489758 LOXL3P58215 753 aa13.15□□□□□ -0.3
CLIC4-203ENST00000489758 PYHIN1Q6K0P9 492 aa13.15□□□□□ -0.3
CLIC4-203ENST00000489758 ZNF782Q6ZMW2 699 aaPredicted RBP13.15□□□□□ -0.3
CLIC4-203ENST00000489758 Q71RC1 249 aaPredicted RBP13.15□□□□□ -0.3
CLIC4-203ENST00000489758 OR10A7Q8NGE5 316 aa13.15□□□□□ -0.3
CLIC4-203ENST00000489758 ST6GALNAC5Q9BVH7 336 aa13.15□□□□□ -0.3
CLIC4-203ENST00000489758 SCPEP1Q9HB40 452 aa13.15□□□□□ -0.3
CLIC4-203ENST00000489758 MGAT4AQ9UM21 535 aa13.15□□□□□ -0.3
CLIC4-203ENST00000489758 ACANP16112 2415 aa13.15□□□□□ -0.3
CLIC4-203ENST00000489758 YLPM1P49750 1951 aaKnown RBP13.14□□□□□ -0.31
CLIC4-203ENST00000489758 IGKV1-6A0A0C4DH72 117 aa13.14□□□□□ -0.31
CLIC4-203ENST00000489758 CENPVL3A0A0U1RRI6 287 aa13.14□□□□□ -0.31
CLIC4-203ENST00000489758 MEIS3P1A6NDR6 274 aa13.14□□□□□ -0.31
CLIC4-203ENST00000489758 FABP12A6NFH5 140 aa13.14□□□□□ -0.31
CLIC4-203ENST00000489758 SPINT2O43291 252 aa13.14□□□□□ -0.31
CLIC4-203ENST00000489758 LPLP06858 475 aa13.14□□□□□ -0.31
CLIC4-203ENST00000489758 ETV6P41212 452 aa13.14□□□□□ -0.31
CLIC4-203ENST00000489758 KLRD1Q13241 179 aa13.14□□□□□ -0.31
CLIC4-203ENST00000489758 NCR3LG1Q68D85 454 aa13.14□□□□□ -0.31
CLIC4-203ENST00000489758 FAM53AQ6NSI3 398 aaPredicted RBP13.14□□□□□ -0.31
CLIC4-203ENST00000489758 HOGA1Q86XE5 327 aa13.14□□□□□ -0.31
CLIC4-203ENST00000489758 PRR18Q8N4B5 295 aa13.14□□□□□ -0.31
CLIC4-203ENST00000489758 GVQW1Q8N7I0 195 aa13.14□□□□□ -0.31
CLIC4-203ENST00000489758 C15orf40Q8WUR7 153 aa13.14□□□□□ -0.31
CLIC4-203ENST00000489758 SNAPC3Q92966 411 aa13.14□□□□□ -0.31
CLIC4-203ENST00000489758 LHX4Q969G2 390 aa13.14□□□□□ -0.31
CLIC4-203ENST00000489758 SUCNR1Q9BXA5 334 aa13.14□□□□□ -0.31
CLIC4-203ENST00000489758 TMEM133Q9H2Q1 129 aa13.14□□□□□ -0.31
CLIC4-203ENST00000489758 RABL2AQ9UBK7 228 aaPredicted RBP13.14□□□□□ -0.31
CLIC4-203ENST00000489758 RABL2BQ9UNT1 228 aa13.14□□□□□ -0.31
CLIC4-203ENST00000489758 SULT1C2O00338 296 aa13.13□□□□□ -0.31
CLIC4-203ENST00000489758 SDCBPO00560 298 aaPredicted RBP13.13□□□□□ -0.31
CLIC4-203ENST00000489758 CTDSPLO15194 276 aa13.13□□□□□ -0.31
CLIC4-203ENST00000489758 FABP7O15540 132 aa13.13□□□□□ -0.31
CLIC4-203ENST00000489758 GSTT2P0CG29 244 aa13.13□□□□□ -0.31
CLIC4-203ENST00000489758 GSTT2BP0CG30 244 aa13.13□□□□□ -0.31
CLIC4-203ENST00000489758 IGHV4-38-2P0DP08 117 aa13.13□□□□□ -0.31
CLIC4-203ENST00000489758 CD34P28906 385 aa13.13□□□□□ -0.31
CLIC4-203ENST00000489758 KIR2DS4P43632 304 aa13.13□□□□□ -0.31
CLIC4-203ENST00000489758 CBX5P45973 191 aa13.13□□□□□ -0.31
CLIC4-203ENST00000489758 HTD2P86397 168 aa13.13□□□□□ -0.31
CLIC4-203ENST00000489758 IL18Q14116 193 aa13.13□□□□□ -0.31
CLIC4-203ENST00000489758 KIR2DS1Q14954 304 aa13.13□□□□□ -0.31
CLIC4-203ENST00000489758 HERPUD1Q15011 391 aa13.13□□□□□ -0.31
CLIC4-203ENST00000489758 ZNF79Q15937 498 aa13.13□□□□□ -0.31
CLIC4-203ENST00000489758 LTC4SQ16873 150 aa13.13□□□□□ -0.31
CLIC4-203ENST00000489758 TMEM30BQ3MIR4 351 aa13.13□□□□□ -0.31
CLIC4-203ENST00000489758 OR52W1Q6IF63 320 aa13.13□□□□□ -0.31
CLIC4-203ENST00000489758 FAM131AQ6UXB0 335 aa13.13□□□□□ -0.31
CLIC4-203ENST00000489758 IL17RELQ6ZVW7 336 aa13.13□□□□□ -0.31
CLIC4-203ENST00000489758 OR52M1Q8NGK5 317 aa13.13□□□□□ -0.31
CLIC4-203ENST00000489758 OR4A4PQ8NGN8 299 aa13.13□□□□□ -0.31
CLIC4-203ENST00000489758 OR52I2Q8NH67 350 aa13.13□□□□□ -0.31
CLIC4-203ENST00000489758 GALMQ96C23 342 aa13.13□□□□□ -0.31
CLIC4-203ENST00000489758 HEXA-AS1Q9H8Q6 139 aa13.13□□□□□ -0.31
CLIC4-203ENST00000489758 GFOD1Q9NXC2 390 aa13.13□□□□□ -0.31
CLIC4-203ENST00000489758 TRAV40A0A0B4J280 105 aa13.12□□□□□ -0.31
CLIC4-203ENST00000489758 NAT1P18440 290 aa13.12□□□□□ -0.31
CLIC4-203ENST00000489758 COX7A1P24310 79 aa13.12□□□□□ -0.31
CLIC4-203ENST00000489758 NFYBP25208 207 aa13.12□□□□□ -0.31
CLIC4-203ENST00000489758 PTBP1P26599 531 aaKnown RBP eCLIP13.12□□□□□ -0.313e-20■■■■■ 91.6
CLIC4-203ENST00000489758 DGCR2P98153 550 aa13.12□□□□□ -0.31
CLIC4-203ENST00000489758 GNMTQ14749 295 aa13.12□□□□□ -0.31
CLIC4-203ENST00000489758 RNASE12Q5GAN4 147 aaKnown RBP13.12□□□□□ -0.31
CLIC4-203ENST00000489758 LINC00299Q6ZSB3 139 aa13.12□□□□□ -0.31
CLIC4-203ENST00000489758 PDZD9Q8IXQ8 264 aa13.12□□□□□ -0.31
CLIC4-203ENST00000489758 PNKDQ8N490 385 aa13.12□□□□□ -0.31
CLIC4-203ENST00000489758 OR11H6Q8NGC7 330 aa13.12□□□□□ -0.31
CLIC4-203ENST00000489758 OR52L2PQ8NGH6 319 aa13.12□□□□□ -0.31
CLIC4-203ENST00000489758 LEAP2Q969E1 77 aa13.12□□□□□ -0.31
CLIC4-203ENST00000489758 CABLES2Q9BTV7 478 aa13.12□□□□□ -0.31
CLIC4-203ENST00000489758 ZNF286AQ9HBT8 521 aa13.12□□□□□ -0.31
CLIC4-203ENST00000489758 RAB9BQ9NP90 201 aa13.12□□□□□ -0.31
CLIC4-203ENST00000489758 ANXA10Q9UJ72 324 aa13.12□□□□□ -0.31
CLIC4-203ENST00000489758 JPT1Q9UK76 154 aa13.12□□□□□ -0.31
CLIC4-203ENST00000489758 NF1P21359 2839 aa13.12□□□□□ -0.31
CLIC4-203ENST00000489758 ARHGAP32A7KAX9 2087 aa13.11□□□□□ -0.31
CLIC4-203ENST00000489758 IGHV3OR16-10A0A075B7F0 116 aa13.11□□□□□ -0.31
CLIC4-203ENST00000489758 IGHV2-26A0A0B4J1V2 119 aa13.11□□□□□ -0.31
CLIC4-203ENST00000489758 IGHV3-43A0A0B4J1X8 118 aa13.11□□□□□ -0.31
CLIC4-203ENST00000489758 IGHV1-69DA0A0B4J2H0 117 aa13.11□□□□□ -0.31
CLIC4-203ENST00000489758 FAM172BPA6NC97 362 aa13.11□□□□□ -0.31
CLIC4-203ENST00000489758 ODF3BA8MYP8 253 aa13.11□□□□□ -0.31
CLIC4-203ENST00000489758 GABARAPH6UMI1 98 aa13.11□□□□□ -0.31
CLIC4-203ENST00000489758 GSTZ1O43708 216 aaPredicted RBP13.11□□□□□ -0.31
CLIC4-203ENST00000489758 DIRAS3O95661 229 aa13.11□□□□□ -0.31
CLIC4-203ENST00000489758 IGHV1-69P01742 117 aa13.11□□□□□ -0.31
CLIC4-203ENST00000489758 FCER2P06734 321 aa13.11□□□□□ -0.31
CLIC4-203ENST00000489758 IGHV3-43DP0DP04 118 aa13.11□□□□□ -0.31
CLIC4-203ENST00000489758 UBE2E1P51965 193 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms