RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 DEFA5Q01523 94 aa11.11□□□□□ -0.63
UFD1-209ENST00000489406 PDZK1IP1Q13113 114 aa11.11□□□□□ -0.63
UFD1-209ENST00000489406 PAN3Q58A45 887 aaKnown RBP11.11□□□□□ -0.63
UFD1-209ENST00000489406 COQ5Q5HYK3 327 aa11.11□□□□□ -0.63
UFD1-209ENST00000489406 TCEANCQ8N8B7 351 aa11.11□□□□□ -0.63
UFD1-209ENST00000489406 NPBQ8NG41 125 aa11.11□□□□□ -0.63
UFD1-209ENST00000489406 OR9Q2Q8NGE9 314 aa11.11□□□□□ -0.63
UFD1-209ENST00000489406 PLPPR1Q8TBJ4 325 aa11.11□□□□□ -0.63
UFD1-209ENST00000489406 RFT1Q96AA3 541 aa11.11□□□□□ -0.63
UFD1-209ENST00000489406 FBXL15Q9H469 300 aa11.11□□□□□ -0.63
UFD1-209ENST00000489406 FAM118AQ9NWS6 357 aa11.11□□□□□ -0.63
UFD1-209ENST00000489406 GID8Q9NWU2 228 aa11.11□□□□□ -0.63
UFD1-209ENST00000489406 GFOD1Q9NXC2 390 aa11.11□□□□□ -0.63
UFD1-209ENST00000489406 OR52A1Q9UKL2 312 aa11.11□□□□□ -0.63
UFD1-209ENST00000489406 IKZF2Q9UKS7 526 aa11.11□□□□□ -0.63
UFD1-209ENST00000489406 DHDHQ9UQ10 334 aa11.11□□□□□ -0.63
UFD1-209ENST00000489406 H0YJX3 145 aa11.1□□□□□ -0.63
UFD1-209ENST00000489406 ZNF254O75437 659 aa11.1□□□□□ -0.63
UFD1-209ENST00000489406 SRSF10O75494 262 aaKnown RBP11.1□□□□□ -0.63
UFD1-209ENST00000489406 NDUFA3O95167 84 aa11.1□□□□□ -0.63
UFD1-209ENST00000489406 RRM2P31350 389 aa11.1□□□□□ -0.63
UFD1-209ENST00000489406 ZNF137PP52743 207 aa11.1□□□□□ -0.63
UFD1-209ENST00000489406 CDK5R1Q15078 307 aa11.1□□□□□ -0.63
UFD1-209ENST00000489406 ODF4Q2M2E3 257 aa11.1□□□□□ -0.63
UFD1-209ENST00000489406 SOHLH1Q5JUK2 328 aa11.1□□□□□ -0.63
UFD1-209ENST00000489406 RSBN1Q5VWQ0 802 aaPredicted RBP11.1□□□□□ -0.63
UFD1-209ENST00000489406 ZNF679Q8IYX0 411 aa11.1□□□□□ -0.63
UFD1-209ENST00000489406 STPG3Q8N7X2 389 aa11.1□□□□□ -0.63
UFD1-209ENST00000489406 OR52M1Q8NGK5 317 aa11.1□□□□□ -0.63
UFD1-209ENST00000489406 C18orf15Q96N68 181 aa11.1□□□□□ -0.63
UFD1-209ENST00000489406 BTBD10Q9BSF8 475 aa11.1□□□□□ -0.63
UFD1-209ENST00000489406 CHST5Q9GZS9 411 aa11.1□□□□□ -0.63
UFD1-209ENST00000489406 PARP12Q9H0J9 701 aaKnown RBP11.1□□□□□ -0.63
UFD1-209ENST00000489406 V9GYQ6 96 aa11.1□□□□□ -0.63
UFD1-209ENST00000489406 SERPINA3P01011 423 aa11.09□□□□□ -0.63
UFD1-209ENST00000489406 GASTP01350 101 aa11.09□□□□□ -0.63
UFD1-209ENST00000489406 ROM1Q03395 351 aa11.09□□□□□ -0.63
UFD1-209ENST00000489406 PLGLAQ15195 96 aa11.09□□□□□ -0.63
UFD1-209ENST00000489406 TM4SF20Q53R12 229 aa11.09□□□□□ -0.63
UFD1-209ENST00000489406 PLEKHG7Q6ZR37 379 aa11.09□□□□□ -0.63
UFD1-209ENST00000489406 POC5Q8NA72 575 aa11.09□□□□□ -0.63
UFD1-209ENST00000489406 OR5T1Q8NG75 326 aa11.09□□□□□ -0.63
UFD1-209ENST00000489406 ARL11Q969Q4 196 aa11.09□□□□□ -0.63
UFD1-209ENST00000489406 MOB1AQ9H8S9 216 aa11.09□□□□□ -0.63
UFD1-209ENST00000489406 IGLV2-18A0A075B6J9 118 aa11.08□□□□□ -0.64
UFD1-209ENST00000489406 IGHV4-4A0A075B6R2 117 aa11.08□□□□□ -0.64
UFD1-209ENST00000489406 KDM4BO94953 1096 aa11.08□□□□□ -0.64
UFD1-209ENST00000489406 FOLR2P14207 255 aa11.08□□□□□ -0.64
UFD1-209ENST00000489406 ZNF134P52741 427 aa11.08□□□□□ -0.64
UFD1-209ENST00000489406 ZNF343Q6P1L6 599 aa11.08□□□□□ -0.64
UFD1-209ENST00000489406 IQCF1Q8N6M8 205 aa11.08□□□□□ -0.64
UFD1-209ENST00000489406 CLCC1Q96S66 551 aa11.08□□□□□ -0.64
UFD1-209ENST00000489406 SPAG4Q9NPE6 437 aa11.08□□□□□ -0.64
UFD1-209ENST00000489406 TRAV24A0A0B4J272 114 aa11.07□□□□□ -0.64
UFD1-209ENST00000489406 BBIP1A8MTZ0 92 aa11.07□□□□□ -0.64
UFD1-209ENST00000489406 MAGEB4O15481 346 aaPredicted RBP11.07□□□□□ -0.64
UFD1-209ENST00000489406 LANCL1O43813 399 aa11.07□□□□□ -0.64
UFD1-209ENST00000489406 GZMHP20718 246 aa11.07□□□□□ -0.64
UFD1-209ENST00000489406 CCL1P22362 96 aa11.07□□□□□ -0.64
UFD1-209ENST00000489406 FCGR2BP31994 310 aaPredicted RBP11.07□□□□□ -0.64
UFD1-209ENST00000489406 LINC00205P59089 165 aa11.07□□□□□ -0.64
UFD1-209ENST00000489406 RPS7P62081 194 aaKnown RBP11.07□□□□□ -0.64
UFD1-209ENST00000489406 MRGPRG-AS1Q2M3A8 158 aa11.07□□□□□ -0.64
UFD1-209ENST00000489406 CT45A1Q5HYN5 189 aa11.07□□□□□ -0.64
UFD1-209ENST00000489406 TMEM61Q8N0U2 210 aa11.07□□□□□ -0.64
UFD1-209ENST00000489406 ZNF439Q8NDP4 499 aa11.07□□□□□ -0.64
UFD1-209ENST00000489406 BVESQ8NE79 360 aa11.07□□□□□ -0.64
UFD1-209ENST00000489406 OR5D18Q8NGL1 313 aa11.07□□□□□ -0.64
UFD1-209ENST00000489406 CT45A3Q8NHU0 189 aa11.07□□□□□ -0.64
UFD1-209ENST00000489406 SNAPC3Q92966 411 aa11.07□□□□□ -0.64
UFD1-209ENST00000489406 APOL4Q9BPW4 351 aa11.07□□□□□ -0.64
UFD1-209ENST00000489406 IL1RAPQ9NPH3 570 aa11.07□□□□□ -0.64
UFD1-209ENST00000489406 TECRQ9NZ01 308 aaKnown RBP11.07□□□□□ -0.64
UFD1-209ENST00000489406 AP3M1Q9Y2T2 418 aa11.07□□□□□ -0.64
UFD1-209ENST00000489406 R4GMQ9 66 aa11.07□□□□□ -0.64
UFD1-209ENST00000489406 A0A0B4J203 849 aa11.06□□□□□ -0.64
UFD1-209ENST00000489406 IGKV1-9A0A0C4DH69 117 aa11.06□□□□□ -0.64
UFD1-209ENST00000489406 C11orf94C9JXX5 98 aa11.06□□□□□ -0.64
UFD1-209ENST00000489406 C15orf65H3BRN8 121 aa11.06□□□□□ -0.64
UFD1-209ENST00000489406 RRHO14718 337 aa11.06□□□□□ -0.64
UFD1-209ENST00000489406 DEFB4AO15263 64 aa11.06□□□□□ -0.64
UFD1-209ENST00000489406 SYT7O43581 403 aa11.06□□□□□ -0.64
UFD1-209ENST00000489406 SCAF4O95104 1147 aaKnown RBP11.06□□□□□ -0.64
UFD1-209ENST00000489406 MRPL3P09001 348 aaKnown RBP11.06□□□□□ -0.64
UFD1-209ENST00000489406 RBMY1CP0DJD4 496 aa11.06□□□□□ -0.64
UFD1-209ENST00000489406 Q6ZR54 194 aa11.06□□□□□ -0.64
UFD1-209ENST00000489406 NR1H4Q96RI1 486 aaPredicted RBP11.06□□□□□ -0.64
UFD1-209ENST00000489406 MRPL20Q9BYC9 149 aaKnown RBP11.06□□□□□ -0.64
UFD1-209ENST00000489406 YIPF3Q9GZM5 350 aa11.06□□□□□ -0.64
UFD1-209ENST00000489406 FLG2Q5D862 2391 aaPredicted RBP11.06□□□□□ -0.64
UFD1-209ENST00000489406 KIR2DL5BA0A0G2JN68 375 aa11.05□□□□□ -0.64
UFD1-209ENST00000489406 KIR2DL5BA0A0G2JPC4 375 aa11.05□□□□□ -0.64
UFD1-209ENST00000489406 C2orf70A6NJV1 201 aa11.05□□□□□ -0.64
UFD1-209ENST00000489406 NME4O00746 187 aa11.05□□□□□ -0.64
UFD1-209ENST00000489406 PRODHO43272 600 aa11.05□□□□□ -0.64
UFD1-209ENST00000489406 APOL3O95236 402 aa11.05□□□□□ -0.64
UFD1-209ENST00000489406 P0DMU3 169 aa11.05□□□□□ -0.64
UFD1-209ENST00000489406 FAM231AP0DMU4 169 aa11.05□□□□□ -0.64
UFD1-209ENST00000489406 FAM231CP0DMU5 169 aa11.05□□□□□ -0.64
UFD1-209ENST00000489406 RPL35AP18077 110 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms