RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 GFOD1Q9NXC2 390 aa11.15□□□□□ -0.62
VTI1A-206ENST00000489142 SCN3BQ9NY72 215 aa11.15□□□□□ -0.62
VTI1A-206ENST00000489142 MOB4Q9Y3A3 225 aa11.15□□□□□ -0.62
VTI1A-206ENST00000489142 FAM90A18PA6NE21 464 aa11.14□□□□□ -0.63
VTI1A-206ENST00000489142 FAM90A16PA6NEW6 464 aa11.14□□□□□ -0.63
VTI1A-206ENST00000489142 FAM90A20PA6NIJ5 464 aa11.14□□□□□ -0.63
VTI1A-206ENST00000489142 FAM90A9PA6NNJ1 464 aa11.14□□□□□ -0.63
VTI1A-206ENST00000489142 FAM90A12PA8MX19 464 aa11.14□□□□□ -0.63
VTI1A-206ENST00000489142 FAM90A5PA8MXJ8 464 aa11.14□□□□□ -0.63
VTI1A-206ENST00000489142 MPIG6BO95866 241 aa11.14□□□□□ -0.63
VTI1A-206ENST00000489142 FAM90A15PP0C7V4 464 aa11.14□□□□□ -0.63
VTI1A-206ENST00000489142 FAM90A13PP0C7W8 464 aa11.14□□□□□ -0.63
VTI1A-206ENST00000489142 FAM90A14PP0C7W9 464 aa11.14□□□□□ -0.63
VTI1A-206ENST00000489142 FAM90A24PP0C7X0 464 aa11.14□□□□□ -0.63
VTI1A-206ENST00000489142 HSMCR30P0CW71 290 aa11.14□□□□□ -0.63
VTI1A-206ENST00000489142 RCC1P18754 421 aaPredicted RBP11.14□□□□□ -0.63
VTI1A-206ENST00000489142 RAB7AP51149 207 aa11.14□□□□□ -0.63
VTI1A-206ENST00000489142 SLC35A2P78381 396 aa11.14□□□□□ -0.63
VTI1A-206ENST00000489142 IRF3Q14653 427 aa11.14□□□□□ -0.63
VTI1A-206ENST00000489142 KHDC1LQ5JSQ8 128 aa11.14□□□□□ -0.63
VTI1A-206ENST00000489142 RNLSQ5VYX0 342 aa11.14□□□□□ -0.63
VTI1A-206ENST00000489142 UNQ9370/PRO34162Q6UXP9 181 aa11.14□□□□□ -0.63
VTI1A-206ENST00000489142 CEACAM19Q7Z692 300 aa11.14□□□□□ -0.63
VTI1A-206ENST00000489142 CDH26Q8IXH8 852 aa11.14□□□□□ -0.63
VTI1A-206ENST00000489142 MRPS24Q96EL2 167 aaKnown RBP11.14□□□□□ -0.63
VTI1A-206ENST00000489142 UQCC2Q9BRT2 126 aa11.14□□□□□ -0.63
VTI1A-206ENST00000489142 SPACA1Q9HBV2 294 aa11.14□□□□□ -0.63
VTI1A-206ENST00000489142 PRKDCP78527 4128 aaKnown RBP11.13□□□□□ -0.63
VTI1A-206ENST00000489142 IGHV1-3A0A0C4DH29 117 aa11.13□□□□□ -0.63
VTI1A-206ENST00000489142 H0YHG0 523 aa11.13□□□□□ -0.63
VTI1A-206ENST00000489142 CCRL2O00421 344 aa11.13□□□□□ -0.63
VTI1A-206ENST00000489142 ORC5O43913 435 aa11.13□□□□□ -0.63
VTI1A-206ENST00000489142 HBZP02008 142 aa11.13□□□□□ -0.63
VTI1A-206ENST00000489142 FUT3P21217 361 aa11.13□□□□□ -0.63
VTI1A-206ENST00000489142 MYF6P23409 242 aa11.13□□□□□ -0.63
VTI1A-206ENST00000489142 MAP2K4P45985 399 aa11.13□□□□□ -0.63
VTI1A-206ENST00000489142 RPS25P62851 125 aaKnown RBP11.13□□□□□ -0.63
VTI1A-206ENST00000489142 CD83Q01151 205 aa11.13□□□□□ -0.63
VTI1A-206ENST00000489142 GNMTQ14749 295 aa11.13□□□□□ -0.63
VTI1A-206ENST00000489142 SLC16A12Q6ZSM3 486 aa11.13□□□□□ -0.63
VTI1A-206ENST00000489142 OR8H3Q8N146 312 aa11.13□□□□□ -0.63
VTI1A-206ENST00000489142 C5orf56Q8N8D9 126 aa11.13□□□□□ -0.63
VTI1A-206ENST00000489142 NOL4LQ96MY1 436 aaPredicted RBP11.13□□□□□ -0.63
VTI1A-206ENST00000489142 CCDC90BQ9GZT6 254 aa11.13□□□□□ -0.63
VTI1A-206ENST00000489142 GNG12Q9UBI6 72 aa11.13□□□□□ -0.63
VTI1A-206ENST00000489142 LINC00527Q9UJ94 153 aa11.13□□□□□ -0.63
VTI1A-206ENST00000489142 TCRBV4S1A1TA0A5B7 111 aa11.12□□□□□ -0.63
VTI1A-206ENST00000489142 ZNF736B4DX44 427 aaPredicted RBP11.12□□□□□ -0.63
VTI1A-206ENST00000489142 SPINT2O43291 252 aa11.12□□□□□ -0.63
VTI1A-206ENST00000489142 PDCD6O75340 191 aa11.12□□□□□ -0.63
VTI1A-206ENST00000489142 VSIG8P0DPA2 414 aa11.12□□□□□ -0.63
VTI1A-206ENST00000489142 ZNF134P52741 427 aa11.12□□□□□ -0.63
VTI1A-206ENST00000489142 EMX1Q04741 257 aaPredicted RBP11.12□□□□□ -0.63
VTI1A-206ENST00000489142 ZNF816Q0VGE8 651 aaPredicted RBP11.12□□□□□ -0.63
VTI1A-206ENST00000489142 BEAN1Q3B7T3 259 aa11.12□□□□□ -0.63
VTI1A-206ENST00000489142 HSD17B12Q53GQ0 312 aa11.12□□□□□ -0.63
VTI1A-206ENST00000489142 OXLD1Q5BKU9 147 aa11.12□□□□□ -0.63
VTI1A-206ENST00000489142 C6orf183Q5T699 404 aa11.12□□□□□ -0.63
VTI1A-206ENST00000489142 SAMD5Q5TGI4 173 aa11.12□□□□□ -0.63
VTI1A-206ENST00000489142 IZUMO2Q6UXV1 221 aa11.12□□□□□ -0.63
VTI1A-206ENST00000489142 ZNF329Q86UD4 541 aa11.12□□□□□ -0.63
VTI1A-206ENST00000489142 THNSL2Q86YJ6 484 aa11.12□□□□□ -0.63
VTI1A-206ENST00000489142 MS4A15Q8N5U1 240 aa11.12□□□□□ -0.63
VTI1A-206ENST00000489142 ZNF439Q8NDP4 499 aa11.12□□□□□ -0.63
VTI1A-206ENST00000489142 OR4F17Q8NGA8 305 aa11.12□□□□□ -0.63
VTI1A-206ENST00000489142 OR52M1Q8NGK5 317 aa11.12□□□□□ -0.63
VTI1A-206ENST00000489142 MRPL30Q8TCC3 161 aaKnown RBP11.12□□□□□ -0.63
VTI1A-206ENST00000489142 THRSPQ92748 146 aa11.12□□□□□ -0.63
VTI1A-206ENST00000489142 UFD1Q92890 307 aa11.12□□□□□ -0.63
VTI1A-206ENST00000489142 OR4F4Q96R69 305 aa11.12□□□□□ -0.63
VTI1A-206ENST00000489142 SULT4A1Q9BR01 284 aa11.12□□□□□ -0.63
VTI1A-206ENST00000489142 NICN1Q9BSH3 213 aa11.12□□□□□ -0.63
VTI1A-206ENST00000489142 CST11Q9H112 138 aa11.12□□□□□ -0.63
VTI1A-206ENST00000489142 TAF9BQ9HBM6 251 aa11.12□□□□□ -0.63
VTI1A-206ENST00000489142 FAM90A10PA6NDY2 464 aa11.11□□□□□ -0.63
VTI1A-206ENST00000489142 FAM90A7PA6NKC0 464 aa11.11□□□□□ -0.63
VTI1A-206ENST00000489142 FAM90A23PA8MXZ1 464 aa11.11□□□□□ -0.63
VTI1A-206ENST00000489142 M0QZK8 103 aa11.11□□□□□ -0.63
VTI1A-206ENST00000489142 RGS10O43665 173 aa11.11□□□□□ -0.63
VTI1A-206ENST00000489142 SC5DO75845 299 aa11.11□□□□□ -0.63
VTI1A-206ENST00000489142 GAPDHP04406 335 aaKnown RBP11.11□□□□□ -0.63
VTI1A-206ENST00000489142 UCHL1P09936 223 aa11.11□□□□□ -0.63
VTI1A-206ENST00000489142 SRMP19623 302 aa11.11□□□□□ -0.63
VTI1A-206ENST00000489142 UNC119Q13432 240 aa11.11□□□□□ -0.63
VTI1A-206ENST00000489142 P2RY14Q15391 338 aa11.11□□□□□ -0.63
VTI1A-206ENST00000489142 CT45A1Q5HYN5 189 aa11.11□□□□□ -0.63
VTI1A-206ENST00000489142 GLT8D1Q68CQ7 371 aa11.11□□□□□ -0.63
VTI1A-206ENST00000489142 TMEM91Q6ZNR0 172 aa11.11□□□□□ -0.63
VTI1A-206ENST00000489142 C6orf201Q7Z4U5 140 aa11.11□□□□□ -0.63
VTI1A-206ENST00000489142 GAPTQ8N292 157 aa11.11□□□□□ -0.63
VTI1A-206ENST00000489142 LINC00311Q8N616 119 aa11.11□□□□□ -0.63
VTI1A-206ENST00000489142 OR4X2Q8NGF9 303 aa11.11□□□□□ -0.63
VTI1A-206ENST00000489142 OR52L2PQ8NGH6 319 aa11.11□□□□□ -0.63
VTI1A-206ENST00000489142 CT45A3Q8NHU0 189 aa11.11□□□□□ -0.63
VTI1A-206ENST00000489142 RTN4IP1Q8WWV3 396 aaPredicted RBP11.11□□□□□ -0.63
VTI1A-206ENST00000489142 PHYHIPQ92561 330 aa11.11□□□□□ -0.63
VTI1A-206ENST00000489142 EAF1Q96JC9 268 aaPredicted RBP11.11□□□□□ -0.63
VTI1A-206ENST00000489142 CNBD2Q96M20 576 aa11.11□□□□□ -0.63
VTI1A-206ENST00000489142 GFI1Q99684 422 aa11.11□□□□□ -0.63
VTI1A-206ENST00000489142 FAAP24Q9BTP7 215 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms