RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 CFHR2P36980 270 aa16.17■□□□□ 0.18
CCM2-216ENST00000488727 P2RX3P56373 397 aa16.17■□□□□ 0.18
CCM2-216ENST00000488727 UBA52P62987 128 aaKnown RBP16.17■□□□□ 0.18
CCM2-216ENST00000488727 COMMD7Q86VX2 200 aa16.17■□□□□ 0.18
CCM2-216ENST00000488727 Q8NFD4 153 aa16.17■□□□□ 0.18
CCM2-216ENST00000488727 COQ8AQ8NI60 647 aa16.17■□□□□ 0.18
CCM2-216ENST00000488727 RAB18Q9NP72 206 aa16.17■□□□□ 0.18
CCM2-216ENST00000488727 AK3Q9UIJ7 227 aa16.17■□□□□ 0.18
CCM2-216ENST00000488727 A0A096LNT2 108 aa16.16■□□□□ 0.18
CCM2-216ENST00000488727 SDCBPO00560 298 aaPredicted RBP16.16■□□□□ 0.18
CCM2-216ENST00000488727 PLATP00750 562 aa16.16■□□□□ 0.18
CCM2-216ENST00000488727 IRF2P14316 349 aa16.16■□□□□ 0.18
CCM2-216ENST00000488727 SUPT4H1P63272 117 aaKnown RBP16.16■□□□□ 0.18
CCM2-216ENST00000488727 CYCSP99999 105 aaKnown RBP16.16■□□□□ 0.18
CCM2-216ENST00000488727 TAF9Q16594 264 aa16.16■□□□□ 0.18
CCM2-216ENST00000488727 KCTD9Q7L273 389 aa16.16■□□□□ 0.18
CCM2-216ENST00000488727 MAFIPQ8WZ33 124 aa16.16■□□□□ 0.18
CCM2-216ENST00000488727 ANXA10Q9UJ72 324 aa16.16■□□□□ 0.18
CCM2-216ENST00000488727 CR1P17927 2039 aa16.16■□□□□ 0.18
CCM2-216ENST00000488727 MAST4O15021 2626 aa16.16■□□□□ 0.18
CCM2-216ENST00000488727 CREBBPQ92793 2442 aa16.16■□□□□ 0.18
CCM2-216ENST00000488727 IGKV1D-8A0A087WSZ0 117 aa16.16■□□□□ 0.18
CCM2-216ENST00000488727 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.16■□□□□ 0.18
CCM2-216ENST00000488727 IGHV2-70P01814 119 aa16.16■□□□□ 0.18
CCM2-216ENST00000488727 RPS2P15880 293 aaKnown RBP16.16■□□□□ 0.18
CCM2-216ENST00000488727 ZNF660Q6AZW8 331 aaPredicted RBP16.16■□□□□ 0.18
CCM2-216ENST00000488727 SAXO1Q8IYX7 474 aa16.16■□□□□ 0.18
CCM2-216ENST00000488727 C1orf87Q8N0U7 546 aa16.16■□□□□ 0.18
CCM2-216ENST00000488727 BOLLQ8N9W6 283 aaKnown RBP16.16■□□□□ 0.18
CCM2-216ENST00000488727 OR10Z1Q8NGY1 313 aa16.16■□□□□ 0.18
CCM2-216ENST00000488727 SEC22AQ96IW7 307 aa16.16■□□□□ 0.18
CCM2-216ENST00000488727 CMSS1Q9BQ75 279 aaKnown RBP16.16■□□□□ 0.18
CCM2-216ENST00000488727 PKIBQ9C010 78 aa16.16■□□□□ 0.18
CCM2-216ENST00000488727 FAM90A10PA6NDY2 464 aa16.15■□□□□ 0.18
CCM2-216ENST00000488727 FAM90A18PA6NE21 464 aa16.15■□□□□ 0.18
CCM2-216ENST00000488727 FAM90A16PA6NEW6 464 aa16.15■□□□□ 0.18
CCM2-216ENST00000488727 FAM90A20PA6NIJ5 464 aa16.15■□□□□ 0.18
CCM2-216ENST00000488727 FAM90A8PA6NJQ4 464 aa16.15■□□□□ 0.18
CCM2-216ENST00000488727 FAM90A7PA6NKC0 464 aa16.15■□□□□ 0.18
CCM2-216ENST00000488727 FAM90A22PA8MWA6 464 aa16.15■□□□□ 0.18
CCM2-216ENST00000488727 FAM90A12PA8MX19 464 aa16.15■□□□□ 0.18
CCM2-216ENST00000488727 FAM90A5PA8MXJ8 464 aa16.15■□□□□ 0.18
CCM2-216ENST00000488727 FAM90A23PA8MXZ1 464 aa16.15■□□□□ 0.18
CCM2-216ENST00000488727 SRRM5B3KS81 715 aa16.15■□□□□ 0.18
CCM2-216ENST00000488727 FCGR3AP08637 254 aa16.15■□□□□ 0.18
CCM2-216ENST00000488727 FAM90A15PP0C7V4 464 aa16.15■□□□□ 0.18
CCM2-216ENST00000488727 FAM90A13PP0C7W8 464 aa16.15■□□□□ 0.18
CCM2-216ENST00000488727 FAM90A14PP0C7W9 464 aa16.15■□□□□ 0.18
CCM2-216ENST00000488727 FAM90A24PP0C7X0 464 aa16.15■□□□□ 0.18
CCM2-216ENST00000488727 SLC25A16P16260 332 aa16.15■□□□□ 0.18
CCM2-216ENST00000488727 CD80P33681 288 aa16.15■□□□□ 0.18
CCM2-216ENST00000488727 ARPC4P59998 168 aa16.15■□□□□ 0.18
CCM2-216ENST00000488727 ACOT7LQ6ZUV0 252 aa16.15■□□□□ 0.18
CCM2-216ENST00000488727 RAB1CQ92928 201 aa16.15■□□□□ 0.18
CCM2-216ENST00000488727 TIMD4Q96H15 378 aa16.15■□□□□ 0.18
CCM2-216ENST00000488727 ZNF488Q96MN9 340 aa16.15■□□□□ 0.18
CCM2-216ENST00000488727 SULT4A1Q9BR01 284 aa16.15■□□□□ 0.18
CCM2-216ENST00000488727 HDHD3Q9BSH5 251 aaPredicted RBP16.15■□□□□ 0.18
CCM2-216ENST00000488727 FAAP24Q9BTP7 215 aa16.15■□□□□ 0.18
CCM2-216ENST00000488727 WDR13Q9H1Z4 485 aa16.15■□□□□ 0.18
CCM2-216ENST00000488727 NARFLQ9H6Q4 476 aa16.15■□□□□ 0.18
CCM2-216ENST00000488727 TRBV6-7A0A0A0MS04 114 aa16.14■□□□□ 0.17
CCM2-216ENST00000488727 RNF222A6NCQ9 220 aa16.14■□□□□ 0.17
CCM2-216ENST00000488727 RNF223E7ERA6 249 aa16.14■□□□□ 0.17
CCM2-216ENST00000488727 BCL2L11O43521 198 aa16.14■□□□□ 0.17
CCM2-216ENST00000488727 PDCD6O75340 191 aa16.14■□□□□ 0.17
CCM2-216ENST00000488727 CTSDP07339 412 aaPredicted RBP16.14■□□□□ 0.17
CCM2-216ENST00000488727 RBM11P57052 281 aaKnown RBP16.14■□□□□ 0.17
CCM2-216ENST00000488727 IL24Q13007 206 aa16.14■□□□□ 0.17
CCM2-216ENST00000488727 TOR2AQ5JU69 321 aa16.14■□□□□ 0.17
CCM2-216ENST00000488727 SPNS3Q6ZMD2 512 aa16.14■□□□□ 0.17
CCM2-216ENST00000488727 SLC25A26Q70HW3 274 aa16.14■□□□□ 0.17
CCM2-216ENST00000488727 OR51F2Q8NH61 342 aa16.14■□□□□ 0.17
CCM2-216ENST00000488727 THAP6Q8TBB0 222 aa16.14■□□□□ 0.17
CCM2-216ENST00000488727 MTCH1Q9NZJ7 389 aa16.14■□□□□ 0.17
CCM2-216ENST00000488727 C14orf166Q9Y224 244 aaKnown RBP16.14■□□□□ 0.17
CCM2-216ENST00000488727 FLNAP21333 2647 aaKnown RBP16.14■□□□□ 0.17
CCM2-216ENST00000488727 PPIAL4EA0A075B759 164 aa16.14■□□□□ 0.17
CCM2-216ENST00000488727 IGHV4-61A0A0C4DH41 118 aa16.14■□□□□ 0.17
CCM2-216ENST00000488727 FAM25EA8MYX2 175 aa16.14■□□□□ 0.17
CCM2-216ENST00000488727 PPIAL4DF5H284 164 aa16.14■□□□□ 0.17
CCM2-216ENST00000488727 GEMIN2O14893 280 aaKnown RBP16.14■□□□□ 0.17
CCM2-216ENST00000488727 SFTPBP07988 381 aa16.14■□□□□ 0.17
CCM2-216ENST00000488727 NMBP08949 121 aa16.14■□□□□ 0.17
CCM2-216ENST00000488727 PPIAL4FP0DN26 164 aa16.14■□□□□ 0.17
CCM2-216ENST00000488727 AP2S1P53680 142 aaPredicted RBP16.14■□□□□ 0.17
CCM2-216ENST00000488727 PIGYQ3MUY2 71 aa16.14■□□□□ 0.17
CCM2-216ENST00000488727 BATF2Q8N1L9 274 aa16.14■□□□□ 0.17
CCM2-216ENST00000488727 CIARTQ8N365 385 aaPredicted RBP16.14■□□□□ 0.17
CCM2-216ENST00000488727 SLAMF9Q96A28 289 aa16.14■□□□□ 0.17
CCM2-216ENST00000488727 REG4Q9BYZ8 158 aa16.14■□□□□ 0.17
CCM2-216ENST00000488727 CHMP1AQ9HD42 196 aaPredicted RBP16.14■□□□□ 0.17
CCM2-216ENST00000488727 RDH8Q9NYR8 311 aa16.14■□□□□ 0.17
CCM2-216ENST00000488727 ST3GAL6Q9Y274 331 aa16.14■□□□□ 0.17
CCM2-216ENST00000488727 POLDIP2Q9Y2S7 368 aa16.14■□□□□ 0.17
CCM2-216ENST00000488727 PPIAL4AQ9Y536 164 aa16.14■□□□□ 0.17
CCM2-216ENST00000488727 C5orf51A6NDU8 294 aa16.13■□□□□ 0.17
CCM2-216ENST00000488727 PGA5P0DJD9 388 aa16.13■□□□□ 0.17
CCM2-216ENST00000488727 PSMB6P28072 239 aa16.13■□□□□ 0.17
CCM2-216ENST00000488727 BAMBIQ13145 260 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms