RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 CDCP2Q5VXM1 449 aa16.78■□□□□ 0.28
LIMS2-215ENST00000484252 SP5Q6BEB4 398 aaPredicted RBP16.78■□□□□ 0.28
LIMS2-215ENST00000484252 STX12Q86Y82 276 aa16.78■□□□□ 0.28
LIMS2-215ENST00000484252 C1QL4Q86Z23 238 aa16.78■□□□□ 0.28
LIMS2-215ENST00000484252 TMEM251Q8N6I4 163 aa16.78■□□□□ 0.28
LIMS2-215ENST00000484252 RBMXL1Q96E39 390 aaKnown RBP16.78■□□□□ 0.28
LIMS2-215ENST00000484252 GPHA2Q96T91 129 aa16.78■□□□□ 0.28
LIMS2-215ENST00000484252 HES7Q9BYE0 225 aa16.78■□□□□ 0.28
LIMS2-215ENST00000484252 UFSP2Q9NUQ7 469 aa16.78■□□□□ 0.28
LIMS2-215ENST00000484252 CDRT15L2A8MXV6 281 aa16.77■□□□□ 0.28
LIMS2-215ENST00000484252 IFNA17P01571 189 aa16.77■□□□□ 0.28
LIMS2-215ENST00000484252 DAOP14920 347 aa16.77■□□□□ 0.28
LIMS2-215ENST00000484252 NQO2P16083 231 aa16.77■□□□□ 0.28
LIMS2-215ENST00000484252 RPL23AP62750 156 aaKnown RBP16.77■□□□□ 0.28
LIMS2-215ENST00000484252 CCL20P78556 96 aa16.77■□□□□ 0.28
LIMS2-215ENST00000484252 ZXDAP98168 799 aa16.77■□□□□ 0.28
LIMS2-215ENST00000484252 PLGLB1Q02325 96 aa16.77■□□□□ 0.28
LIMS2-215ENST00000484252 RAB40CQ96S21 281 aa16.77■□□□□ 0.28
LIMS2-215ENST00000484252 ABHD14AQ9BUJ0 271 aa16.77■□□□□ 0.28
LIMS2-215ENST00000484252 GGACTQ9BVM4 153 aa16.77■□□□□ 0.28
LIMS2-215ENST00000484252 HS3ST1O14792 307 aa16.77■□□□□ 0.27
LIMS2-215ENST00000484252 ZNHIT1O43257 154 aa16.77■□□□□ 0.27
LIMS2-215ENST00000484252 TNFSF12O43508 249 aa16.77■□□□□ 0.27
LIMS2-215ENST00000484252 SERPINE2P07093 398 aa16.77■□□□□ 0.27
LIMS2-215ENST00000484252 MDH2P40926 338 aaKnown RBP16.77■□□□□ 0.27
LIMS2-215ENST00000484252 PAX9P55771 341 aa16.77■□□□□ 0.27
LIMS2-215ENST00000484252 TAS2R30P59541 319 aa16.77■□□□□ 0.27
LIMS2-215ENST00000484252 C20orf204Q6ZNR8 217 aa16.77■□□□□ 0.27
LIMS2-215ENST00000484252 MOB1BQ7L9L4 216 aa16.77■□□□□ 0.27
LIMS2-215ENST00000484252 DLL3Q9NYJ7 618 aa16.77■□□□□ 0.27
LIMS2-215ENST00000484252 ST8SIA5O15466 376 aa16.76■□□□□ 0.27
LIMS2-215ENST00000484252 PPIHO43447 177 aaKnown RBP16.76■□□□□ 0.27
LIMS2-215ENST00000484252 HSPB1P04792 205 aaKnown RBP16.76■□□□□ 0.27
LIMS2-215ENST00000484252 FAM24BQ8N5W8 94 aa16.76■□□□□ 0.27
LIMS2-215ENST00000484252 TMEM217Q8N7C4 229 aa16.76■□□□□ 0.27
LIMS2-215ENST00000484252 TMEM105Q8N8V8 129 aa16.76■□□□□ 0.27
LIMS2-215ENST00000484252 NANOS1Q8WY41 292 aaKnown RBP16.76■□□□□ 0.27
LIMS2-215ENST00000484252 RDH5Q92781 318 aa16.76■□□□□ 0.27
LIMS2-215ENST00000484252 GPR146Q96CH1 333 aa16.76■□□□□ 0.27
LIMS2-215ENST00000484252 OR51I2Q9H344 312 aa16.76■□□□□ 0.27
LIMS2-215ENST00000484252 SMOC1Q9H4F8 434 aa16.76■□□□□ 0.27
LIMS2-215ENST00000484252 PUS1Q9Y606 427 aaKnown RBP eCLIP16.76■□□□□ 0.27
LIMS2-215ENST00000484252 RFNGQ9Y644 331 aa16.76■□□□□ 0.27
LIMS2-215ENST00000484252 J3QT63 122 aa16.76■□□□□ 0.27
LIMS2-215ENST00000484252 ITGA3P26006 1051 aa16.76■□□□□ 0.27
LIMS2-215ENST00000484252 WNT5AP41221 380 aa16.76■□□□□ 0.27
LIMS2-215ENST00000484252 ZNF154Q13106 437 aa16.76■□□□□ 0.27
LIMS2-215ENST00000484252 CLN3Q13286 438 aa16.76■□□□□ 0.27
LIMS2-215ENST00000484252 ZNF506Q5JVG8 444 aa16.76■□□□□ 0.27
LIMS2-215ENST00000484252 NUFIP2Q7Z417 695 aaKnown RBP16.76■□□□□ 0.27
LIMS2-215ENST00000484252 LILRB2Q8N423 598 aa16.76■□□□□ 0.27
LIMS2-215ENST00000484252 OR10V1Q8NGI7 309 aa16.76■□□□□ 0.27
LIMS2-215ENST00000484252 ZNF488Q96MN9 340 aa16.76■□□□□ 0.27
LIMS2-215ENST00000484252 ERRFI1Q9UJM3 462 aaPredicted RBP16.76■□□□□ 0.27
LIMS2-215ENST00000484252 A0A1W2PPE2 198 aa16.75■□□□□ 0.27
LIMS2-215ENST00000484252 IFNA5P01569 189 aa16.75■□□□□ 0.27
LIMS2-215ENST00000484252 ARG1P05089 322 aa16.75■□□□□ 0.27
LIMS2-215ENST00000484252 SRP19P09132 144 aaKnown RBP16.75■□□□□ 0.27
LIMS2-215ENST00000484252 DCAF10Q5QP82 559 aa16.75■□□□□ 0.27
LIMS2-215ENST00000484252 LSM10Q969L4 123 aaKnown RBP16.75■□□□□ 0.27
LIMS2-215ENST00000484252 DMDP11532 3685 aa16.75■□□□□ 0.27
LIMS2-215ENST00000484252 hCG_1809904A0A1W2PP81 198 aa16.74■□□□□ 0.27
LIMS2-215ENST00000484252 A0A1W2PR64 198 aa16.74■□□□□ 0.27
LIMS2-215ENST00000484252 A0A1W2PRV1 198 aa16.74■□□□□ 0.27
LIMS2-215ENST00000484252 OR2C1O95371 312 aa16.74■□□□□ 0.27
LIMS2-215ENST00000484252 CNOT4O95628 575 aaKnown RBP16.74■□□□□ 0.27
LIMS2-215ENST00000484252 EPHA1P21709 976 aa16.74■□□□□ 0.27
LIMS2-215ENST00000484252 GPX4P36969 197 aaPredicted RBP16.74■□□□□ 0.27
LIMS2-215ENST00000484252 RPS23P62266 143 aaKnown RBP16.74■□□□□ 0.27
LIMS2-215ENST00000484252 TMEM164Q5U3C3 297 aa16.74■□□□□ 0.27
LIMS2-215ENST00000484252 OR1K1Q8NGR3 316 aa16.74■□□□□ 0.27
LIMS2-215ENST00000484252 FOXJ2Q9P0K8 574 aa16.74■□□□□ 0.27
LIMS2-215ENST00000484252 KLF13Q9Y2Y9 288 aaPredicted RBP16.74■□□□□ 0.27
LIMS2-215ENST00000484252 WSB1Q9Y6I7 421 aa16.74■□□□□ 0.27
LIMS2-215ENST00000484252 TRAV1-1A0A0B4J248 108 aa16.74■□□□□ 0.27
LIMS2-215ENST00000484252 SCAF4O95104 1147 aaKnown RBP16.74■□□□□ 0.27
LIMS2-215ENST00000484252 TGIF1Q15583 401 aa16.74■□□□□ 0.27
LIMS2-215ENST00000484252 YPEL4Q96NS1 127 aa16.74■□□□□ 0.27
LIMS2-215ENST00000484252 PLA2G3Q9NZ20 509 aa16.74■□□□□ 0.27
LIMS2-215ENST00000484252 A0A087WWC5 75 aa16.73■□□□□ 0.27
LIMS2-215ENST00000484252 KIAA1324LA8MWY0 1029 aaPredicted RBP16.73■□□□□ 0.27
LIMS2-215ENST00000484252 H3BQ15 152 aa16.73■□□□□ 0.27
LIMS2-215ENST00000484252 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.73■□□□□ 0.27
LIMS2-215ENST00000484252 J3QW42 95 aa16.73■□□□□ 0.27
LIMS2-215ENST00000484252 LILRA1O75019 489 aa16.73■□□□□ 0.27
LIMS2-215ENST00000484252 PSG2P11465 335 aa16.73■□□□□ 0.27
LIMS2-215ENST00000484252 RUNX1Q01196 453 aa16.73■□□□□ 0.27
LIMS2-215ENST00000484252 ICAM4Q14773 271 aa16.73■□□□□ 0.27
LIMS2-215ENST00000484252 Q6P435 159 aa16.73■□□□□ 0.27
LIMS2-215ENST00000484252 Q8IYB0 196 aa16.73■□□□□ 0.27
LIMS2-215ENST00000484252 OR51H1Q8NH63 302 aa16.73■□□□□ 0.27
LIMS2-215ENST00000484252 RNASE11Q8TAA1 199 aaKnown RBP16.73■□□□□ 0.27
LIMS2-215ENST00000484252 LIPGQ9Y5X9 500 aa16.73■□□□□ 0.27
LIMS2-215ENST00000484252 DOCK10Q96BY6 2186 aa16.73■□□□□ 0.27
LIMS2-215ENST00000484252 A0A0G2JRQ6 117 aa16.73■□□□□ 0.27
LIMS2-215ENST00000484252 NXPH3O95157 252 aa16.73■□□□□ 0.27
LIMS2-215ENST00000484252 HAGHQ16775 308 aa16.73■□□□□ 0.27
LIMS2-215ENST00000484252 KHDC3LQ587J8 217 aa16.73■□□□□ 0.27
LIMS2-215ENST00000484252 ADAM5Q6NVV9 412 aa16.73■□□□□ 0.27
LIMS2-215ENST00000484252 LINC00696Q6ZRV3 163 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms