RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 RAB39BQ96DA2 213 aa11.61□□□□□ -0.55
SMAD9-204ENST00000483941 COQ2Q96H96 371 aa11.61□□□□□ -0.55
SMAD9-204ENST00000483941 GINS4Q9BRT9 223 aa11.61□□□□□ -0.55
SMAD9-204ENST00000483941 PIMREGQ9BSJ6 248 aa11.61□□□□□ -0.55
SMAD9-204ENST00000483941 TINAGL1Q9GZM7 467 aaPredicted RBP11.61□□□□□ -0.55
SMAD9-204ENST00000483941 METRNQ9UJH8 293 aa11.61□□□□□ -0.55
SMAD9-204ENST00000483941 UBE2J1Q9Y385 318 aaPredicted RBP11.61□□□□□ -0.55
SMAD9-204ENST00000483941 CEACAM18A8MTB9 384 aa11.6□□□□□ -0.55
SMAD9-204ENST00000483941 NPIPB11E5RHQ5 1161 aa11.6□□□□□ -0.55
SMAD9-204ENST00000483941 M0QYG6 137 aa11.6□□□□□ -0.55
SMAD9-204ENST00000483941 SSX4O60224 188 aa11.6□□□□□ -0.55
SMAD9-204ENST00000483941 IGHV4-39P01824 125 aa11.6□□□□□ -0.55
SMAD9-204ENST00000483941 GSTT2P0CG29 244 aa11.6□□□□□ -0.55
SMAD9-204ENST00000483941 IL2RGP31785 369 aa11.6□□□□□ -0.55
SMAD9-204ENST00000483941 GLIPR1P48060 266 aa11.6□□□□□ -0.55
SMAD9-204ENST00000483941 SEC61A1P61619 476 aaKnown RBP11.6□□□□□ -0.55
SMAD9-204ENST00000483941 SURF2Q15527 256 aaPredicted RBP11.6□□□□□ -0.55
SMAD9-204ENST00000483941 HMGN3Q15651 99 aa11.6□□□□□ -0.55
SMAD9-204ENST00000483941 PLA1AQ53H76 456 aa11.6□□□□□ -0.55
SMAD9-204ENST00000483941 LPCAT3Q6P1A2 487 aa11.6□□□□□ -0.55
SMAD9-204ENST00000483941 DHRS11Q6UWP2 260 aa11.6□□□□□ -0.55
SMAD9-204ENST00000483941 CCBE1Q6UXH8 406 aaPredicted RBP11.6□□□□□ -0.55
SMAD9-204ENST00000483941 BTN2A1Q7KYR7 527 aa11.6□□□□□ -0.55
SMAD9-204ENST00000483941 OR51S1Q8NGJ8 323 aa11.6□□□□□ -0.55
SMAD9-204ENST00000483941 OR56B4Q8NH76 319 aa11.6□□□□□ -0.55
SMAD9-204ENST00000483941 OR10J5Q8NHC4 309 aa11.6□□□□□ -0.55
SMAD9-204ENST00000483941 GIMAP1Q8WWP7 306 aa11.6□□□□□ -0.55
SMAD9-204ENST00000483941 MAFIPQ8WZ33 124 aa11.6□□□□□ -0.55
SMAD9-204ENST00000483941 CORO2AQ92828 525 aa11.6□□□□□ -0.55
SMAD9-204ENST00000483941 GAL3ST2Q9H3Q3 398 aa11.6□□□□□ -0.55
SMAD9-204ENST00000483941 TAF9BQ9HBM6 251 aa11.6□□□□□ -0.55
SMAD9-204ENST00000483941 ING3Q9NXR8 418 aa11.6□□□□□ -0.55
SMAD9-204ENST00000483941 TAS2R3Q9NYW6 316 aa11.6□□□□□ -0.55
SMAD9-204ENST00000483941 TANC2Q9HCD6 1990 aa11.59□□□□□ -0.55
SMAD9-204ENST00000483941 ZNF729A6NN14 1252 aaPredicted RBP11.59□□□□□ -0.55
SMAD9-204ENST00000483941 DVL1O14640 695 aa11.59□□□□□ -0.55
SMAD9-204ENST00000483941 SMAD7O15105 426 aaKnown RBP11.59□□□□□ -0.55
SMAD9-204ENST00000483941 HSPA12AO43301 675 aa11.59□□□□□ -0.55
SMAD9-204ENST00000483941 RGS11O94810 467 aa11.59□□□□□ -0.55
SMAD9-204ENST00000483941 NDUFB6O95139 128 aa11.59□□□□□ -0.55
SMAD9-204ENST00000483941 DHFRP00374 187 aa11.59□□□□□ -0.55
SMAD9-204ENST00000483941 TCRBP04435 133 aa11.59□□□□□ -0.55
SMAD9-204ENST00000483941 RCC1P18754 421 aaPredicted RBP11.59□□□□□ -0.55
SMAD9-204ENST00000483941 ZBTB25P24278 435 aa11.59□□□□□ -0.55
SMAD9-204ENST00000483941 RPL31P62899 125 aaKnown RBP11.59□□□□□ -0.55
SMAD9-204ENST00000483941 HTD2P86397 168 aa11.59□□□□□ -0.55
SMAD9-204ENST00000483941 HOXA4Q00056 320 aaPredicted RBP11.59□□□□□ -0.55
SMAD9-204ENST00000483941 SCGB2B2Q4G0G5 96 aa11.59□□□□□ -0.55
SMAD9-204ENST00000483941 AVPI1Q5T686 147 aa11.59□□□□□ -0.55
SMAD9-204ENST00000483941 C11orf88Q6PI97 169 aa11.59□□□□□ -0.55
SMAD9-204ENST00000483941 LRRC75A-AS1Q8N1F1 130 aa11.59□□□□□ -0.55
SMAD9-204ENST00000483941 ZDHHC22Q8N966 263 aa11.59□□□□□ -0.55
SMAD9-204ENST00000483941 OR10A7Q8NGE5 316 aa11.59□□□□□ -0.55
SMAD9-204ENST00000483941 FAM168AQ92567 244 aa11.59□□□□□ -0.55
SMAD9-204ENST00000483941 DMRTB1Q96MA1 342 aa11.59□□□□□ -0.55
SMAD9-204ENST00000483941 SLC6A7Q99884 636 aa11.59□□□□□ -0.55
SMAD9-204ENST00000483941 CABLES2Q9BTV7 478 aa11.59□□□□□ -0.55
SMAD9-204ENST00000483941 PATZ1Q9HBE1 687 aaKnown RBP11.59□□□□□ -0.55
SMAD9-204ENST00000483941 CLN8Q9UBY8 286 aa11.59□□□□□ -0.55
SMAD9-204ENST00000483941 LINC00312Q9Y6C7 94 aa11.59□□□□□ -0.55
SMAD9-204ENST00000483941 hCG_1809904A0A1W2PP81 198 aa11.58□□□□□ -0.56
SMAD9-204ENST00000483941 A0A1W2PPE2 198 aa11.58□□□□□ -0.56
SMAD9-204ENST00000483941 A0A1W2PR64 198 aa11.58□□□□□ -0.56
SMAD9-204ENST00000483941 A0A1W2PRV1 198 aa11.58□□□□□ -0.56
SMAD9-204ENST00000483941 LY6HO94772 140 aa11.58□□□□□ -0.56
SMAD9-204ENST00000483941 WNT2P09544 360 aa11.58□□□□□ -0.56
SMAD9-204ENST00000483941 HERV-K104P61576 105 aa11.58□□□□□ -0.56
SMAD9-204ENST00000483941 ESCO2Q56NI9 601 aa11.58□□□□□ -0.56
SMAD9-204ENST00000483941 OR4D10Q8NGI6 311 aa11.58□□□□□ -0.56
SMAD9-204ENST00000483941 ZFAND1Q8TCF1 268 aa11.58□□□□□ -0.56
SMAD9-204ENST00000483941 MRGPRDQ8TDS7 321 aa11.58□□□□□ -0.56
SMAD9-204ENST00000483941 ARL11Q969Q4 196 aa11.58□□□□□ -0.56
SMAD9-204ENST00000483941 KIRREL1Q96J84 757 aa11.58□□□□□ -0.56
SMAD9-204ENST00000483941 Q96MF0 132 aa11.58□□□□□ -0.56
SMAD9-204ENST00000483941 MARVELD1Q9BSK0 173 aa11.58□□□□□ -0.56
SMAD9-204ENST00000483941 OCEL1Q9H607 264 aa11.58□□□□□ -0.56
SMAD9-204ENST00000483941 IGKV1D-8A0A087WSZ0 117 aa11.57□□□□□ -0.56
SMAD9-204ENST00000483941 TRBV6-7A0A0A0MS04 114 aa11.57□□□□□ -0.56
SMAD9-204ENST00000483941 KBTBD11-OT1A0A1B0GTJ5 212 aa11.57□□□□□ -0.56
SMAD9-204ENST00000483941 FAM172BPA6NC97 362 aa11.57□□□□□ -0.56
SMAD9-204ENST00000483941 C12orf77C9JDV5 145 aa11.57□□□□□ -0.56
SMAD9-204ENST00000483941 INMT-MINDY4F8WBC2 141 aa11.57□□□□□ -0.56
SMAD9-204ENST00000483941 SDCBPO00560 298 aaPredicted RBP11.57□□□□□ -0.56
SMAD9-204ENST00000483941 BET1O15155 118 aa11.57□□□□□ -0.56
SMAD9-204ENST00000483941 PRAF2O60831 178 aa11.57□□□□□ -0.56
SMAD9-204ENST00000483941 NDUFS7O75251 213 aa11.57□□□□□ -0.56
SMAD9-204ENST00000483941 TFF1P04155 84 aa11.57□□□□□ -0.56
SMAD9-204ENST00000483941 SCTP09683 121 aa11.57□□□□□ -0.56
SMAD9-204ENST00000483941 H2AFB2P0C5Z0 115 aa11.57□□□□□ -0.56
SMAD9-204ENST00000483941 ZNF735P0CB33 412 aa11.57□□□□□ -0.56
SMAD9-204ENST00000483941 S100GP29377 79 aa11.57□□□□□ -0.56
SMAD9-204ENST00000483941 FCGR2CP31995 323 aa11.57□□□□□ -0.56
SMAD9-204ENST00000483941 BTCP35070 178 aa11.57□□□□□ -0.56
SMAD9-204ENST00000483941 CCR6P51684 374 aa11.57□□□□□ -0.56
SMAD9-204ENST00000483941 GNB2P62879 340 aa11.57□□□□□ -0.56
SMAD9-204ENST00000483941 LYPD2Q6UXB3 125 aa11.57□□□□□ -0.56
SMAD9-204ENST00000483941 ZNF525Q8N782 197 aa11.57□□□□□ -0.56
SMAD9-204ENST00000483941 IL1F10Q8WWZ1 152 aa11.57□□□□□ -0.56
SMAD9-204ENST00000483941 H1FXQ92522 213 aaKnown RBP11.57□□□□□ -0.56
SMAD9-204ENST00000483941 ZNF2Q9BSG1 426 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms