RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 IL15RAQ13261 267 aa11.72□□□□□ -0.53
CLK3-204ENST00000483723 C6orf183Q5T699 404 aa11.72□□□□□ -0.53
CLK3-204ENST00000483723 TRAT1Q6PIZ9 186 aa11.72□□□□□ -0.53
CLK3-204ENST00000483723 ZCCHC24Q8N2G6 241 aaKnown RBP11.72□□□□□ -0.53
CLK3-204ENST00000483723 ZNF561Q8N587 486 aa11.72□□□□□ -0.53
CLK3-204ENST00000483723 ZNF565Q8N9K5 539 aa11.72□□□□□ -0.53
CLK3-204ENST00000483723 GRPEL2Q8TAA5 225 aa11.72□□□□□ -0.53
CLK3-204ENST00000483723 GLYATL2Q8WU03 294 aa11.72□□□□□ -0.53
CLK3-204ENST00000483723 SECTM1Q8WVN6 248 aa11.72□□□□□ -0.53
CLK3-204ENST00000483723 ITLN2Q8WWU7 325 aaPredicted RBP11.72□□□□□ -0.53
CLK3-204ENST00000483723 MSI2Q96DH6 328 aaKnown RBP11.72□□□□□ -0.53
CLK3-204ENST00000483723 SEC22AQ96IW7 307 aa11.72□□□□□ -0.53
CLK3-204ENST00000483723 NMES1Q9C002 83 aa11.72□□□□□ -0.53
CLK3-204ENST00000483723 SLA2Q9H6Q3 261 aa11.72□□□□□ -0.53
CLK3-204ENST00000483723 CCL28Q9NRJ3 127 aa11.72□□□□□ -0.53
CLK3-204ENST00000483723 PRR13Q9NZ81 148 aa11.72□□□□□ -0.53
CLK3-204ENST00000483723 OR1A1Q9P1Q5 309 aa11.72□□□□□ -0.53
CLK3-204ENST00000483723 KIAA2026Q5HYC2 2103 aa11.72□□□□□ -0.53
CLK3-204ENST00000483723 ADAP1O75689 374 aa11.72□□□□□ -0.53
CLK3-204ENST00000483723 CLDN14O95500 239 aa11.72□□□□□ -0.53
CLK3-204ENST00000483723 OR5AC1P0C628 307 aa11.72□□□□□ -0.53
CLK3-204ENST00000483723 SLC25A4P12235 298 aa11.72□□□□□ -0.53
CLK3-204ENST00000483723 IRF2P14316 349 aa11.72□□□□□ -0.53
CLK3-204ENST00000483723 UQCRFS1P47985 274 aa11.72□□□□□ -0.53
CLK3-204ENST00000483723 CYCSP99999 105 aaKnown RBP11.72□□□□□ -0.53
CLK3-204ENST00000483723 FGL1Q08830 312 aa11.72□□□□□ -0.53
CLK3-204ENST00000483723 ZNF672Q499Z4 452 aaPredicted RBP11.72□□□□□ -0.53
CLK3-204ENST00000483723 TMEM65Q6PI78 240 aa11.72□□□□□ -0.53
CLK3-204ENST00000483723 ZNF788Q6ZQV5 615 aa11.72□□□□□ -0.53
CLK3-204ENST00000483723 ZNF818PQ6ZRF7 136 aa11.72□□□□□ -0.53
CLK3-204ENST00000483723 TGIF2LYQ8IUE0 185 aa11.72□□□□□ -0.53
CLK3-204ENST00000483723 OR5D13Q8NGL4 314 aa11.72□□□□□ -0.53
CLK3-204ENST00000483723 OR1L1Q8NH94 360 aa11.72□□□□□ -0.53
CLK3-204ENST00000483723 TANC2Q9HCD6 1990 aa11.71□□□□□ -0.53
CLK3-204ENST00000483723 CACNA1DQ01668 2161 aa11.71□□□□□ -0.53
CLK3-204ENST00000483723 C15orf65H3BRN8 121 aa11.71□□□□□ -0.54
CLK3-204ENST00000483723 TNFRSF13BO14836 293 aaPredicted RBP11.71□□□□□ -0.54
CLK3-204ENST00000483723 HBZP02008 142 aa11.71□□□□□ -0.54
CLK3-204ENST00000483723 CGB3P0DN86 165 aa11.71□□□□□ -0.54
CLK3-204ENST00000483723 CGB7P0DN87 165 aa11.71□□□□□ -0.54
CLK3-204ENST00000483723 GZMHP20718 246 aa11.71□□□□□ -0.54
CLK3-204ENST00000483723 SNRPD2P62316 118 aaKnown RBP11.71□□□□□ -0.54
CLK3-204ENST00000483723 LIAT1Q6ZQX7 453 aa11.71□□□□□ -0.54
CLK3-204ENST00000483723 BVESQ8NE79 360 aa11.71□□□□□ -0.54
CLK3-204ENST00000483723 OR10V1Q8NGI7 309 aa11.71□□□□□ -0.54
CLK3-204ENST00000483723 OR13A1Q8NGR1 328 aa11.71□□□□□ -0.54
CLK3-204ENST00000483723 IL1F10Q8WWZ1 152 aa11.71□□□□□ -0.54
CLK3-204ENST00000483723 GALMQ96C23 342 aa11.71□□□□□ -0.54
CLK3-204ENST00000483723 C2orf50Q96LR7 162 aa11.71□□□□□ -0.54
CLK3-204ENST00000483723 VRK1Q99986 396 aaPredicted RBP11.71□□□□□ -0.54
CLK3-204ENST00000483723 PDCD10Q9BUL8 212 aa11.71□□□□□ -0.54
CLK3-204ENST00000483723 FAM234AQ9H0X4 552 aa11.71□□□□□ -0.54
CLK3-204ENST00000483723 SAP30LQ9HAJ7 183 aa11.71□□□□□ -0.54
CLK3-204ENST00000483723 DCAF16Q9NXF7 216 aa11.71□□□□□ -0.54
CLK3-204ENST00000483723 RDH8Q9NYR8 311 aa11.71□□□□□ -0.54
CLK3-204ENST00000483723 COL6A6A6NMZ7 2263 aa11.71□□□□□ -0.54
CLK3-204ENST00000483723 ARFGEF3Q5TH69 2177 aa11.7□□□□□ -0.54
CLK3-204ENST00000483723 ODAMA1E959 279 aa11.7□□□□□ -0.54
CLK3-204ENST00000483723 C5orf51A6NDU8 294 aa11.7□□□□□ -0.54
CLK3-204ENST00000483723 LRRC30A6NM36 301 aa11.7□□□□□ -0.54
CLK3-204ENST00000483723 TMEM178BH3BS89 294 aa11.7□□□□□ -0.54
CLK3-204ENST00000483723 LGALS8O00214 317 aa11.7□□□□□ -0.54
CLK3-204ENST00000483723 CXCL2P19875 107 aa11.7□□□□□ -0.54
CLK3-204ENST00000483723 LUMP51884 338 aaPredicted RBP11.7□□□□□ -0.54
CLK3-204ENST00000483723 ZNRF1Q8ND25 227 aa11.7□□□□□ -0.54
CLK3-204ENST00000483723 MRGPRDQ8TDS7 321 aa11.7□□□□□ -0.54
CLK3-204ENST00000483723 PPP1R1CQ8WVI7 109 aa11.7□□□□□ -0.54
CLK3-204ENST00000483723 AKR1E2Q96JD6 320 aa11.7□□□□□ -0.54
CLK3-204ENST00000483723 C18orf12Q96KH6 178 aa11.7□□□□□ -0.54
CLK3-204ENST00000483723 OR10C1Q96KK4 312 aa11.7□□□□□ -0.54
CLK3-204ENST00000483723 GAFA1Q96PS6 74 aa11.7□□□□□ -0.54
CLK3-204ENST00000483723 ZNF665Q9H7R5 613 aa11.7□□□□□ -0.54
CLK3-204ENST00000483723 NBEAQ8NFP9 2946 aa11.7□□□□□ -0.54
CLK3-204ENST00000483723 C3orf85A0A1B0GTC6 90 aa11.69□□□□□ -0.54
CLK3-204ENST00000483723 C13orf42A0A1B0GVH6 325 aa11.69□□□□□ -0.54
CLK3-204ENST00000483723 ZG16O60844 167 aa11.69□□□□□ -0.54
CLK3-204ENST00000483723 PGLYRP1O75594 196 aaPredicted RBP11.69□□□□□ -0.54
CLK3-204ENST00000483723 IGLV2-14P01704 120 aa11.69□□□□□ -0.54
CLK3-204ENST00000483723 CEACAM6P40199 344 aa11.69□□□□□ -0.54
CLK3-204ENST00000483723 P2RX3P56373 397 aa11.69□□□□□ -0.54
CLK3-204ENST00000483723 HTD2P86397 168 aa11.69□□□□□ -0.54
CLK3-204ENST00000483723 SP6Q3SY56 376 aa11.69□□□□□ -0.54
CLK3-204ENST00000483723 C11orf87Q6NUJ2 197 aa11.69□□□□□ -0.54
CLK3-204ENST00000483723 TBC1D26Q86UD7 250 aa11.69□□□□□ -0.54
CLK3-204ENST00000483723 C1orf87Q8N0U7 546 aa11.69□□□□□ -0.54
CLK3-204ENST00000483723 LGI3Q8N145 548 aa11.69□□□□□ -0.54
CLK3-204ENST00000483723 TPRX1Q8N7U7 411 aa11.69□□□□□ -0.54
CLK3-204ENST00000483723 TP53RKQ96S44 253 aa11.69□□□□□ -0.54
CLK3-204ENST00000483723 DNTTIP1Q9H147 329 aa11.69□□□□□ -0.54
CLK3-204ENST00000483723 METTL8Q9H825 291 aaKnown RBP11.69□□□□□ -0.54
CLK3-204ENST00000483723 HEXA-AS1Q9H8Q6 139 aa11.69□□□□□ -0.54
CLK3-204ENST00000483723 DYNLRB1Q9NP97 96 aa11.69□□□□□ -0.54
CLK3-204ENST00000483723 TMEM106BQ9NUM4 274 aa11.69□□□□□ -0.54
CLK3-204ENST00000483723 COMMD9Q9P000 198 aa11.69□□□□□ -0.54
CLK3-204ENST00000483723 RAI1Q7Z5J4 1906 aaPredicted RBP11.69□□□□□ -0.54
CLK3-204ENST00000483723 TRAV38-1A0A0B4J264 116 aa11.69□□□□□ -0.54
CLK3-204ENST00000483723 MPTX1A8MV57 137 aa11.69□□□□□ -0.54
CLK3-204ENST00000483723 FAM25EA8MYX2 175 aa11.69□□□□□ -0.54
CLK3-204ENST00000483723 HSD17B6O14756 317 aa11.69□□□□□ -0.54
CLK3-204ENST00000483723 SIGLEC5O15389 551 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms