RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 A0A1W2PR64 198 aa10.83□□□□□ -0.68
HDAC1-208ENST00000482310 A0A1W2PRV1 198 aa10.83□□□□□ -0.68
HDAC1-208ENST00000482310 C17orf98A8MV24 154 aa10.83□□□□□ -0.68
HDAC1-208ENST00000482310 SDCBPO00560 298 aaPredicted RBP10.83□□□□□ -0.68
HDAC1-208ENST00000482310 SPINT2O43291 252 aa10.83□□□□□ -0.68
HDAC1-208ENST00000482310 HLA-DRB3P79483 266 aa10.83□□□□□ -0.68
HDAC1-208ENST00000482310 ARL6IP1Q15041 203 aa10.83□□□□□ -0.68
HDAC1-208ENST00000482310 PNLIPRP3Q17RR3 467 aa10.83□□□□□ -0.68
HDAC1-208ENST00000482310 UTF1Q5T230 341 aa10.83□□□□□ -0.68
HDAC1-208ENST00000482310 BRD3OSQ6XYD6 125 aa10.83□□□□□ -0.68
HDAC1-208ENST00000482310 C11orf42Q8N5U0 333 aa10.83□□□□□ -0.68
HDAC1-208ENST00000482310 C22orf15Q8WYQ4 148 aa10.83□□□□□ -0.68
HDAC1-208ENST00000482310 KIRREL1Q96J84 757 aa10.83□□□□□ -0.68
HDAC1-208ENST00000482310 METTL8Q9H825 291 aaKnown RBP10.83□□□□□ -0.68
HDAC1-208ENST00000482310 Q9N2K0 584 aa10.83□□□□□ -0.68
HDAC1-208ENST00000482310 IFT46Q9NQC8 304 aa10.83□□□□□ -0.68
HDAC1-208ENST00000482310 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.83□□□□□ -0.68
HDAC1-208ENST00000482310 SESN1Q9Y6P5 492 aa10.83□□□□□ -0.68
HDAC1-208ENST00000482310 HIVEP2P31629 2446 aa10.83□□□□□ -0.68
HDAC1-208ENST00000482310 IGKV1D-8A0A087WSZ0 117 aa10.82□□□□□ -0.68
HDAC1-208ENST00000482310 A0A1W2PPE3 182 aa10.82□□□□□ -0.68
HDAC1-208ENST00000482310 RNASEK-C17orf49H0YIS7 233 aa10.82□□□□□ -0.68
HDAC1-208ENST00000482310 C15orf65H3BRN8 121 aa10.82□□□□□ -0.68
HDAC1-208ENST00000482310 HLA-DQB1P01920 261 aa10.82□□□□□ -0.68
HDAC1-208ENST00000482310 SCTP09683 121 aa10.82□□□□□ -0.68
HDAC1-208ENST00000482310 HNF1AP20823 631 aa10.82□□□□□ -0.68
HDAC1-208ENST00000482310 GNMTQ14749 295 aa10.82□□□□□ -0.68
HDAC1-208ENST00000482310 ZNF880Q6PDB4 577 aa10.82□□□□□ -0.68
HDAC1-208ENST00000482310 FAM131AQ6UXB0 335 aa10.82□□□□□ -0.68
HDAC1-208ENST00000482310 MOB1BQ7L9L4 216 aa10.82□□□□□ -0.68
HDAC1-208ENST00000482310 GAPTQ8N292 157 aa10.82□□□□□ -0.68
HDAC1-208ENST00000482310 OR52L2PQ8NGH6 319 aa10.82□□□□□ -0.68
HDAC1-208ENST00000482310 RIMS4Q9H426 269 aaPredicted RBP10.82□□□□□ -0.68
HDAC1-208ENST00000482310 ZNF286AQ9HBT8 521 aa10.82□□□□□ -0.68
HDAC1-208ENST00000482310 MBNL3Q9NUK0 354 aaKnown RBP10.82□□□□□ -0.68
HDAC1-208ENST00000482310 ZNRD1Q9P1U0 126 aa10.82□□□□□ -0.68
HDAC1-208ENST00000482310 GNG12Q9UBI6 72 aa10.82□□□□□ -0.68
HDAC1-208ENST00000482310 SOX21Q9Y651 276 aaPredicted RBP10.82□□□□□ -0.68
HDAC1-208ENST00000482310 NSD1Q96L73 2696 aaPredicted RBP10.81□□□□□ -0.68
HDAC1-208ENST00000482310 FABP12A6NFH5 140 aa10.81□□□□□ -0.68
HDAC1-208ENST00000482310 BET1O15155 118 aa10.81□□□□□ -0.68
HDAC1-208ENST00000482310 ORC5O43913 435 aa10.81□□□□□ -0.68
HDAC1-208ENST00000482310 ARG1P05089 322 aa10.81□□□□□ -0.68
HDAC1-208ENST00000482310 GSTT2P0CG29 244 aa10.81□□□□□ -0.68
HDAC1-208ENST00000482310 GSTT2BP0CG30 244 aa10.81□□□□□ -0.68
HDAC1-208ENST00000482310 CGB3P0DN86 165 aa10.81□□□□□ -0.68
HDAC1-208ENST00000482310 CGB7P0DN87 165 aa10.81□□□□□ -0.68
HDAC1-208ENST00000482310 GZMHP20718 246 aa10.81□□□□□ -0.68
HDAC1-208ENST00000482310 PRTN3P24158 256 aa10.81□□□□□ -0.68
HDAC1-208ENST00000482310 PRSS3P35030 304 aa10.81□□□□□ -0.68
HDAC1-208ENST00000482310 PITPNAQ00169 270 aa10.81□□□□□ -0.68
HDAC1-208ENST00000482310 HMGN3Q15651 99 aa10.81□□□□□ -0.68
HDAC1-208ENST00000482310 KLF17Q5JT82 389 aaPredicted RBP10.81□□□□□ -0.68
HDAC1-208ENST00000482310 GPR157Q5UAW9 335 aa10.81□□□□□ -0.68
HDAC1-208ENST00000482310 OR52W1Q6IF63 320 aa10.81□□□□□ -0.68
HDAC1-208ENST00000482310 TRAT1Q6PIZ9 186 aa10.81□□□□□ -0.68
HDAC1-208ENST00000482310 HEPN1Q6WQI6 88 aa10.81□□□□□ -0.68
HDAC1-208ENST00000482310 OR6Q1Q8NGQ2 317 aa10.81□□□□□ -0.68
HDAC1-208ENST00000482310 NANPQ8TBE9 248 aa10.81□□□□□ -0.68
HDAC1-208ENST00000482310 UPRTQ96BW1 309 aa10.81□□□□□ -0.68
HDAC1-208ENST00000482310 BEX2Q9BXY8 128 aa10.81□□□□□ -0.68
HDAC1-208ENST00000482310 TMEM133Q9H2Q1 129 aa10.81□□□□□ -0.68
HDAC1-208ENST00000482310 NCOR1P1Q9H4R4 102 aa10.81□□□□□ -0.68
HDAC1-208ENST00000482310 OR1A1Q9P1Q5 309 aa10.81□□□□□ -0.68
HDAC1-208ENST00000482310 SLC23A1Q9UHI7 598 aa10.81□□□□□ -0.68
HDAC1-208ENST00000482310 FN1P02751 2386 aaKnown RBP10.81□□□□□ -0.68
HDAC1-208ENST00000482310 MXRA5Q9NR99 2828 aa10.8□□□□□ -0.68
HDAC1-208ENST00000482310 TRBV6-6A0A0A6YYG2 114 aa10.8□□□□□ -0.68
HDAC1-208ENST00000482310 IGHV2-26A0A0B4J1V2 119 aa10.8□□□□□ -0.68
HDAC1-208ENST00000482310 CENPVL3A0A0U1RRI6 287 aa10.8□□□□□ -0.68
HDAC1-208ENST00000482310 TRDCB7Z8K6 153 aa10.8□□□□□ -0.68
HDAC1-208ENST00000482310 FABP7O15540 132 aa10.8□□□□□ -0.68
HDAC1-208ENST00000482310 HSPA12AO43301 675 aa10.8□□□□□ -0.68
HDAC1-208ENST00000482310 MELTFP08582 738 aa10.8□□□□□ -0.68
HDAC1-208ENST00000482310 DTYMKP23919 212 aa10.8□□□□□ -0.68
HDAC1-208ENST00000482310 FPR2P25090 351 aa10.8□□□□□ -0.68
HDAC1-208ENST00000482310 PAX6P26367 422 aa10.8□□□□□ -0.68
HDAC1-208ENST00000482310 PPP1CCP36873 323 aaKnown RBP10.8□□□□□ -0.68
HDAC1-208ENST00000482310 DGCR2P98153 550 aa10.8□□□□□ -0.68
HDAC1-208ENST00000482310 PYDC2Q56P42 97 aa10.8□□□□□ -0.68
HDAC1-208ENST00000482310 IGSF11Q5DX21 431 aa10.8□□□□□ -0.68
HDAC1-208ENST00000482310 NCR3LG1Q68D85 454 aa10.8□□□□□ -0.68
HDAC1-208ENST00000482310 HCP5Q6MZN7 132 aa10.8□□□□□ -0.68
HDAC1-208ENST00000482310 OR13D1Q8NGV5 346 aa10.8□□□□□ -0.68
HDAC1-208ENST00000482310 OR52I2Q8NH67 350 aa10.8□□□□□ -0.68
HDAC1-208ENST00000482310 TNFRSF14Q92956 283 aa10.8□□□□□ -0.68
HDAC1-208ENST00000482310 GALMQ96C23 342 aa10.8□□□□□ -0.68
HDAC1-208ENST00000482310 ABHD1Q96SE0 405 aa10.8□□□□□ -0.68
HDAC1-208ENST00000482310 OR2S2Q9NQN1 319 aa10.8□□□□□ -0.68
HDAC1-208ENST00000482310 PTTG2Q9NZH5 202 aa10.8□□□□□ -0.68
HDAC1-208ENST00000482310 A3GALT2U3KPV4 340 aa10.8□□□□□ -0.68
HDAC1-208ENST00000482310 IGHV1-69DA0A0B4J2H0 117 aa10.79□□□□□ -0.68
HDAC1-208ENST00000482310 NPIPB11E5RHQ5 1161 aa10.79□□□□□ -0.68
HDAC1-208ENST00000482310 IGHV1-69P01742 117 aa10.79□□□□□ -0.68
HDAC1-208ENST00000482310 RBP4P02753 201 aa10.79□□□□□ -0.68
HDAC1-208ENST00000482310 LPLP06858 475 aa10.79□□□□□ -0.68
HDAC1-208ENST00000482310 ARPC4P59998 168 aa10.79□□□□□ -0.68
HDAC1-208ENST00000482310 HERPUD1Q15011 391 aa10.79□□□□□ -0.68
HDAC1-208ENST00000482310 PLA1AQ53H76 456 aa10.79□□□□□ -0.68
HDAC1-208ENST00000482310 ABHD12Q8N2K0 398 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms