RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 ZNF25P17030 456 aaPredicted RBP9.79□□□□□ -0.84
SMPD4-218ENST00000482171 FSTP19883 344 aa9.79□□□□□ -0.84
SMPD4-218ENST00000482171 ZNF441Q8N8Z8 693 aa9.79□□□□□ -0.84
SMPD4-218ENST00000482171 BORCS7Q96B45 105 aa9.79□□□□□ -0.84
SMPD4-218ENST00000482171 UHRF2Q96PU4 802 aa9.79□□□□□ -0.84
SMPD4-218ENST00000482171 LPAR5Q9H1C0 372 aa9.79□□□□□ -0.84
SMPD4-218ENST00000482171 ZDHHC11Q9H8X9 412 aa9.79□□□□□ -0.84
SMPD4-218ENST00000482171 C17orf112F2Z3M2 114 aa9.79□□□□□ -0.84
SMPD4-218ENST00000482171 DVL1O14640 695 aa9.79□□□□□ -0.84
SMPD4-218ENST00000482171 NPIPB7O75200 414 aa9.79□□□□□ -0.84
SMPD4-218ENST00000482171 PKIAP61925 76 aa9.79□□□□□ -0.84
SMPD4-218ENST00000482171 TEX30Q5JUR7 227 aa9.79□□□□□ -0.84
SMPD4-218ENST00000482171 ZNF880Q6PDB4 577 aa9.79□□□□□ -0.84
SMPD4-218ENST00000482171 MRGPRDQ8TDS7 321 aa9.79□□□□□ -0.84
SMPD4-218ENST00000482171 FGF11Q92914 225 aa9.79□□□□□ -0.84
SMPD4-218ENST00000482171 GALMQ96C23 342 aa9.79□□□□□ -0.84
SMPD4-218ENST00000482171 GGACTQ9BVM4 153 aa9.79□□□□□ -0.84
SMPD4-218ENST00000482171 CLDN16Q9Y5I7 305 aa9.79□□□□□ -0.84
SMPD4-218ENST00000482171 SPG11Q96JI7 2443 aa9.79□□□□□ -0.84
SMPD4-218ENST00000482171 CD8AP01732 235 aa9.79□□□□□ -0.84
SMPD4-218ENST00000482171 MGST1P10620 155 aaKnown RBP9.79□□□□□ -0.84
SMPD4-218ENST00000482171 CEACAM6P40199 344 aa9.79□□□□□ -0.84
SMPD4-218ENST00000482171 OR3A1P47881 315 aa9.79□□□□□ -0.84
SMPD4-218ENST00000482171 KRTDAPP60985 99 aa9.79□□□□□ -0.84
SMPD4-218ENST00000482171 IL13RA2Q14627 380 aa9.79□□□□□ -0.84
SMPD4-218ENST00000482171 IL22RA2Q969J5 263 aa9.79□□□□□ -0.84
SMPD4-218ENST00000482171 NTNG2Q96CW9 530 aa9.79□□□□□ -0.84
SMPD4-218ENST00000482171 PLXNA2O75051 1894 aa9.79□□□□□ -0.84
SMPD4-218ENST00000482171 C2orf16Q68DN1 1984 aa9.79□□□□□ -0.84
SMPD4-218ENST00000482171 CACNA1AO00555 2505 aa9.79□□□□□ -0.84
SMPD4-218ENST00000482171 CXorf65A6NEN9 183 aa9.79□□□□□ -0.84
SMPD4-218ENST00000482171 NTN3O00634 580 aaPredicted RBP9.79□□□□□ -0.84
SMPD4-218ENST00000482171 SOX15O60248 233 aa9.79□□□□□ -0.84
SMPD4-218ENST00000482171 CLPSP04118 112 aa9.79□□□□□ -0.84
SMPD4-218ENST00000482171 SEC11BP0C7V7 166 aa9.79□□□□□ -0.84
SMPD4-218ENST00000482171 ZNF883P0CG24 379 aa9.79□□□□□ -0.84
SMPD4-218ENST00000482171 CHRNA7P36544 502 aa9.79□□□□□ -0.84
SMPD4-218ENST00000482171 ZNF260Q3ZCT1 412 aa9.79□□□□□ -0.84
SMPD4-218ENST00000482171 CCL17Q92583 94 aa9.79□□□□□ -0.84
SMPD4-218ENST00000482171 OPN3Q9H1Y3 402 aaPredicted RBP9.79□□□□□ -0.84
SMPD4-218ENST00000482171 RIMS4Q9H426 269 aaPredicted RBP9.79□□□□□ -0.84
SMPD4-218ENST00000482171 PARD6AQ9NPB6 346 aa9.79□□□□□ -0.84
SMPD4-218ENST00000482171 DEPPQ9NTK1 212 aa9.79□□□□□ -0.84
SMPD4-218ENST00000482171 ELOA3CA0A087WX78 387 aaPredicted RBP9.78□□□□□ -0.84
SMPD4-218ENST00000482171 OR5B21A6NL26 309 aa9.78□□□□□ -0.84
SMPD4-218ENST00000482171 PTBP3O95758 552 aaKnown RBP9.78□□□□□ -0.84
SMPD4-218ENST00000482171 CD82P27701 267 aa9.78□□□□□ -0.84
SMPD4-218ENST00000482171 GALR1P47211 349 aa9.78□□□□□ -0.84
SMPD4-218ENST00000482171 MS4A10Q96PG2 267 aa9.78□□□□□ -0.84
SMPD4-218ENST00000482171 MPC1Q9Y5U8 109 aa9.78□□□□□ -0.84
SMPD4-218ENST00000482171 UBE2L5PA0A1B0GUS4 154 aa9.78□□□□□ -0.84
SMPD4-218ENST00000482171 CTSDP07339 412 aaPredicted RBP9.78□□□□□ -0.84
SMPD4-218ENST00000482171 PLAURQ03405 335 aa9.78□□□□□ -0.84
SMPD4-218ENST00000482171 ANKRD55Q3KP44 614 aa9.78□□□□□ -0.84
SMPD4-218ENST00000482171 FDX2Q6P4F2 183 aa9.78□□□□□ -0.84
SMPD4-218ENST00000482171 FAM214BQ7L5A3 538 aa9.78□□□□□ -0.84
SMPD4-218ENST00000482171 CYB561D1Q8N8Q1 229 aa9.78□□□□□ -0.84
SMPD4-218ENST00000482171 A0A0U1RQV5 110 aa9.78□□□□□ -0.84
SMPD4-218ENST00000482171 CLN5O75503 358 aa9.78□□□□□ -0.84
SMPD4-218ENST00000482171 CD74P04233 296 aa9.78□□□□□ -0.84
SMPD4-218ENST00000482171 CD59P13987 128 aa9.78□□□□□ -0.84
SMPD4-218ENST00000482171 TPRX1Q8N7U7 411 aa9.78□□□□□ -0.84
SMPD4-218ENST00000482171 GMPPAQ96IJ6 420 aaPredicted RBP9.78□□□□□ -0.84
SMPD4-218ENST00000482171 TAAR3PQ9P1P4 343 aa9.78□□□□□ -0.84
SMPD4-218ENST00000482171 GPR132Q9UNW8 380 aa9.78□□□□□ -0.84
SMPD4-218ENST00000482171 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.77□□□□□ -0.849e-7■■■□□ 17.4
SMPD4-218ENST00000482171 M0R143 59 aa9.77□□□□□ -0.84
SMPD4-218ENST00000482171 ISG15P05161 165 aa9.77□□□□□ -0.84
SMPD4-218ENST00000482171 RAB4AP20338 218 aa9.77□□□□□ -0.84
SMPD4-218ENST00000482171 ATP6V0CP27449 155 aa9.77□□□□□ -0.84
SMPD4-218ENST00000482171 DYNLT3P51808 116 aa9.77□□□□□ -0.84
SMPD4-218ENST00000482171 TMEM241Q24JQ0 296 aa9.77□□□□□ -0.84
SMPD4-218ENST00000482171 PHYHD1Q5SRE7 291 aa9.77□□□□□ -0.84
SMPD4-218ENST00000482171 ZNF385CQ66K41 422 aaPredicted RBP9.77□□□□□ -0.84
SMPD4-218ENST00000482171 BHLHA15Q7RTS1 189 aaPredicted RBP9.77□□□□□ -0.84
SMPD4-218ENST00000482171 HOGA1Q86XE5 327 aa9.77□□□□□ -0.84
SMPD4-218ENST00000482171 TIMP4Q99727 224 aa9.77□□□□□ -0.84
SMPD4-218ENST00000482171 VPS25Q9BRG1 176 aa9.77□□□□□ -0.84
SMPD4-218ENST00000482171 CARHSP1Q9Y2V2 147 aaKnown RBP9.77□□□□□ -0.84
SMPD4-218ENST00000482171 C3orf85A0A1B0GTC6 90 aa9.77□□□□□ -0.85
SMPD4-218ENST00000482171 TMEM30CPA0ZSE6 113 aa9.77□□□□□ -0.85
SMPD4-218ENST00000482171 LRP5LA4QPB2 252 aa9.77□□□□□ -0.85
SMPD4-218ENST00000482171 MAP1LC3B2A6NCE7 125 aa9.77□□□□□ -0.85
SMPD4-218ENST00000482171 H0YL77 283 aa9.77□□□□□ -0.85
SMPD4-218ENST00000482171 GALR2O43603 387 aaPredicted RBP9.77□□□□□ -0.85
SMPD4-218ENST00000482171 RNF224P0DH78 156 aa9.77□□□□□ -0.85
SMPD4-218ENST00000482171 PPP1CCP36873 323 aaKnown RBP9.77□□□□□ -0.85
SMPD4-218ENST00000482171 P2RY4P51582 365 aa9.77□□□□□ -0.85
SMPD4-218ENST00000482171 KLF3P57682 345 aaPredicted RBP9.77□□□□□ -0.85
SMPD4-218ENST00000482171 SURF2Q15527 256 aaPredicted RBP9.77□□□□□ -0.85
SMPD4-218ENST00000482171 SLC35G3Q8N808 338 aa9.77□□□□□ -0.85
SMPD4-218ENST00000482171 ADAMTS17Q8TE56 1095 aa9.77□□□□□ -0.85
SMPD4-218ENST00000482171 TMEM68Q96MH6 324 aa9.77□□□□□ -0.85
SMPD4-218ENST00000482171 MAP1LC3BQ9GZQ8 125 aa9.77□□□□□ -0.85
SMPD4-218ENST00000482171 COL4A4P53420 1690 aaPredicted RBP9.77□□□□□ -0.85
SMPD4-218ENST00000482171 LOC102723996A0A087X1L8 192 aa9.77□□□□□ -0.85
SMPD4-218ENST00000482171 TRAV34A0A0B4J273 112 aa9.77□□□□□ -0.85
SMPD4-218ENST00000482171 CLEC18AA5D8T8 446 aa9.77□□□□□ -0.85
SMPD4-218ENST00000482171 H0Y8G0 127 aa9.77□□□□□ -0.85
SMPD4-218ENST00000482171 MMP9P14780 707 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms