RNA–Protein interactions for RNA: ENST00000481502.5

SYNE1-225, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 3

Gene SYNE1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-225ENST00000481502 GUCA2AQ02747 115 aa6.81□□□□□ -1.32
SYNE1-225ENST00000481502 EDDM3AQ14507 147 aa6.81□□□□□ -1.32
SYNE1-225ENST00000481502 PLA1AQ53H76 456 aa6.81□□□□□ -1.32
SYNE1-225ENST00000481502 MZT2BQ6NZ67 158 aa6.81□□□□□ -1.32
SYNE1-225ENST00000481502 LPCAT3Q6P1A2 487 aa6.81□□□□□ -1.32
SYNE1-225ENST00000481502 C16orf87Q6PH81 154 aa6.81□□□□□ -1.32
SYNE1-225ENST00000481502 KRTAP1-3Q8IUG1 177 aa6.81□□□□□ -1.32
SYNE1-225ENST00000481502 LINC01356Q8N9X3 169 aa6.81□□□□□ -1.32
SYNE1-225ENST00000481502 OR13A1Q8NGR1 328 aa6.81□□□□□ -1.32
SYNE1-225ENST00000481502 OR5H2Q8NGV7 314 aa6.81□□□□□ -1.32
SYNE1-225ENST00000481502 OR6F1Q8NGZ6 308 aa6.81□□□□□ -1.32
SYNE1-225ENST00000481502 OR10J5Q8NHC4 309 aa6.81□□□□□ -1.32
SYNE1-225ENST00000481502 SNAPC3Q92966 411 aa6.81□□□□□ -1.32
SYNE1-225ENST00000481502 ARL11Q969Q4 196 aa6.81□□□□□ -1.32
SYNE1-225ENST00000481502 CREB3L1Q96BA8 519 aa6.81□□□□□ -1.32
SYNE1-225ENST00000481502 SLC25A21Q9BQT8 299 aaPredicted RBP6.81□□□□□ -1.32
SYNE1-225ENST00000481502 METTL8Q9H825 291 aaKnown RBP6.81□□□□□ -1.32
SYNE1-225ENST00000481502 CALYQ9NYX4 217 aa6.81□□□□□ -1.32
SYNE1-225ENST00000481502 ELF5Q9UKW6 265 aaPredicted RBP6.81□□□□□ -1.32
SYNE1-225ENST00000481502 GAB2Q9UQC2 676 aa6.81□□□□□ -1.32
SYNE1-225ENST00000481502 FLNBO75369 2602 aaKnown RBP6.81□□□□□ -1.32
SYNE1-225ENST00000481502 CCDC168Q8NDH2 2452 aa6.81□□□□□ -1.32
SYNE1-225ENST00000481502 FBN2P35556 2912 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 ITPR2Q14571 2701 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 CRYBG3Q68DQ2 2970 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 IGHV2-70DA0A0C4DH43 119 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 A0A1B0GW55 424 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 A0A1W2PQ09 198 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 C12orf77C9JDV5 145 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 FCN3O75636 299 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 TUSC2O75896 110 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 HBZP02008 142 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 CD3DP04234 171 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 MSMBP08118 114 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 GSTT2P0CG29 244 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 DUX4L2P0CJ85 424 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 DUX4L3P0CJ86 424 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 DUX4L4P0CJ87 422 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 DUX4L5P0CJ88 424 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 DUX4L6P0CJ89 424 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 DUX4L7P0CJ90 424 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 OR5H8P0DN80 308 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 PTHLHP12272 177 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 SELLP14151 372 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 PRTN3P24158 256 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 RAB7AP51149 207 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 DVL1P1P54792 670 aaPredicted RBP6.8□□□□□ -1.32
SYNE1-225ENST00000481502 UCP3P55916 312 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 DLX6P56179 175 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 PAX8Q06710 450 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 C17orf58Q2M2W7 97 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 ZNF57Q68EA5 555 aaPredicted RBP6.8□□□□□ -1.32
SYNE1-225ENST00000481502 DUX4L9Q6RFH8 374 aaPredicted RBP6.8□□□□□ -1.32
SYNE1-225ENST00000481502 SPNS3Q6ZMD2 512 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 C11orf42Q8N5U0 333 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 LINC00311Q8N616 119 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 GVQW1Q8N7I0 195 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 DTX3Q8N9I9 347 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 MINDY2Q8NBR6 621 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 ZBTB34Q8NCN2 500 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 TERB2Q8NHR7 220 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 ZNF596Q8TC21 504 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 MRGPRDQ8TDS7 321 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 H1FXQ92522 213 aaKnown RBP6.8□□□□□ -1.32
SYNE1-225ENST00000481502 ZNF486Q96H40 463 aaPredicted RBP6.8□□□□□ -1.32
SYNE1-225ENST00000481502 HDHD3Q9BSH5 251 aaPredicted RBP6.8□□□□□ -1.32
SYNE1-225ENST00000481502 HEXA-AS1Q9H8Q6 139 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 C19orf12Q9NSK7 152 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 GFOD1Q9NXC2 390 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 IDI2-AS1Q9NZ38 188 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 DUX4Q9UBX2 424 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 ZNF230Q9UIE0 474 aaPredicted RBP6.8□□□□□ -1.32
SYNE1-225ENST00000481502 INSIG2Q9Y5U4 225 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 LRBAP50851 2863 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 NBPF19A0A087WUL8 3843 aa6.8□□□□□ -1.32
SYNE1-225ENST00000481502 BAHCC1Q9P281 2608 aa6.79□□□□□ -1.32
SYNE1-225ENST00000481502 C22orf46C9J442 243 aa6.79□□□□□ -1.32
SYNE1-225ENST00000481502 J3QRK9 145 aa6.79□□□□□ -1.32
SYNE1-225ENST00000481502 HSPA12AO43301 675 aa6.79□□□□□ -1.32
SYNE1-225ENST00000481502 LYRM1O43325 122 aa6.79□□□□□ -1.32
SYNE1-225ENST00000481502 LANCL1O43813 399 aa6.79□□□□□ -1.32
SYNE1-225ENST00000481502 PTTG1O95997 202 aa6.79□□□□□ -1.32
SYNE1-225ENST00000481502 SCTP09683 121 aa6.79□□□□□ -1.32
SYNE1-225ENST00000481502 IGHV1-8P0DP01 117 aa6.79□□□□□ -1.32
SYNE1-225ENST00000481502 FOSL1P15407 271 aa6.79□□□□□ -1.32
SYNE1-225ENST00000481502 ZFP36P26651 326 aaKnown RBP6.79□□□□□ -1.32
SYNE1-225ENST00000481502 HLA-DMAP28067 261 aa6.79□□□□□ -1.32
SYNE1-225ENST00000481502 SLC6A1P30531 599 aa6.79□□□□□ -1.32
SYNE1-225ENST00000481502 HRH1P35367 487 aa6.79□□□□□ -1.32
SYNE1-225ENST00000481502 RFX2P48378 723 aa6.79□□□□□ -1.32
SYNE1-225ENST00000481502 RAG2P55895 527 aa6.79□□□□□ -1.32
SYNE1-225ENST00000481502 LOXL3P58215 753 aa6.79□□□□□ -1.32
SYNE1-225ENST00000481502 ERVFRD-1P60508 538 aa6.79□□□□□ -1.32
SYNE1-225ENST00000481502 TSPAN5P62079 268 aa6.79□□□□□ -1.32
SYNE1-225ENST00000481502 MORN2Q502X0 79 aa6.79□□□□□ -1.32
SYNE1-225ENST00000481502 NCR3LG1Q68D85 454 aa6.79□□□□□ -1.32
SYNE1-225ENST00000481502 ZNF660Q6AZW8 331 aaPredicted RBP6.79□□□□□ -1.32
SYNE1-225ENST00000481502 Q6ZPA2 131 aa6.79□□□□□ -1.32
SYNE1-225ENST00000481502 TCF23Q7RTU1 214 aa6.79□□□□□ -1.32
SYNE1-225ENST00000481502 LHFPL1Q86WI0 220 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms