RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 MZT2BQ6NZ67 158 aa9.98□□□□□ -0.81
PTPRF-213ENST00000481019 ZNF782Q6ZMW2 699 aaPredicted RBP9.98□□□□□ -0.81
PTPRF-213ENST00000481019 C1orf122Q6ZSJ8 110 aa9.98□□□□□ -0.81
PTPRF-213ENST00000481019 SNX29P2Q8IUI4 249 aa9.98□□□□□ -0.81
PTPRF-213ENST00000481019 TMEM158Q8WZ71 300 aa9.98□□□□□ -0.81
PTPRF-213ENST00000481019 DMRTB1Q96MA1 342 aa9.98□□□□□ -0.81
PTPRF-213ENST00000481019 RIMS4Q9H426 269 aaPredicted RBP9.98□□□□□ -0.81
PTPRF-213ENST00000481019 PRDM13Q9H4Q3 707 aa9.98□□□□□ -0.81
PTPRF-213ENST00000481019 UNKLQ9H9P5 680 aaKnown RBP9.98□□□□□ -0.81
PTPRF-213ENST00000481019 ING3Q9NXR8 418 aa9.98□□□□□ -0.81
PTPRF-213ENST00000481019 C17orf98A8MV24 154 aa9.97□□□□□ -0.81
PTPRF-213ENST00000481019 HSPB6O14558 160 aa9.97□□□□□ -0.81
PTPRF-213ENST00000481019 DEGS1O15121 323 aa9.97□□□□□ -0.81
PTPRF-213ENST00000481019 HOXA3O43365 443 aaPredicted RBP9.97□□□□□ -0.81
PTPRF-213ENST00000481019 CSF1P09603 554 aa9.97□□□□□ -0.81
PTPRF-213ENST00000481019 ZNF44P15621 663 aa9.97□□□□□ -0.81
PTPRF-213ENST00000481019 HIST1H1DP16402 221 aaKnown RBP9.97□□□□□ -0.81
PTPRF-213ENST00000481019 GDNFP39905 211 aa9.97□□□□□ -0.81
PTPRF-213ENST00000481019 P2RX3P56373 397 aa9.97□□□□□ -0.81
PTPRF-213ENST00000481019 GNG2P59768 71 aa9.97□□□□□ -0.81
PTPRF-213ENST00000481019 DYRK1AQ13627 763 aa9.97□□□□□ -0.81
PTPRF-213ENST00000481019 ARFRP1Q13795 201 aa9.97□□□□□ -0.81
PTPRF-213ENST00000481019 ATXN7L3Q14CW9 347 aaPredicted RBP9.97□□□□□ -0.81
PTPRF-213ENST00000481019 ZNF260Q3ZCT1 412 aa9.97□□□□□ -0.81
PTPRF-213ENST00000481019 UTF1Q5T230 341 aa9.97□□□□□ -0.81
PTPRF-213ENST00000481019 ZNF57Q68EA5 555 aaPredicted RBP9.97□□□□□ -0.81
PTPRF-213ENST00000481019 BRICD5Q6PL45 260 aa9.97□□□□□ -0.81
PTPRF-213ENST00000481019 GDPD3Q7L5L3 318 aa9.97□□□□□ -0.81
PTPRF-213ENST00000481019 TOMM5Q8N4H5 51 aa9.97□□□□□ -0.81
PTPRF-213ENST00000481019 PLPPR1Q8TBJ4 325 aa9.97□□□□□ -0.81
PTPRF-213ENST00000481019 KCNK15Q9H427 330 aa9.97□□□□□ -0.81
PTPRF-213ENST00000481019 IFT22Q9H7X7 185 aa9.97□□□□□ -0.81
PTPRF-213ENST00000481019 METTL8Q9H825 291 aaKnown RBP9.97□□□□□ -0.81
PTPRF-213ENST00000481019 TNFRSF19Q9NS68 423 aa9.97□□□□□ -0.81
PTPRF-213ENST00000481019 NAP1L6A6NFF2 107 aa9.96□□□□□ -0.82
PTPRF-213ENST00000481019 MCRIP1C9JLW8 97 aa9.96□□□□□ -0.82
PTPRF-213ENST00000481019 MGST3O14880 152 aa9.96□□□□□ -0.82
PTPRF-213ENST00000481019 GEMIN2O14893 280 aaKnown RBP9.96□□□□□ -0.82
PTPRF-213ENST00000481019 NPFFO15130 113 aa9.96□□□□□ -0.82
PTPRF-213ENST00000481019 PDCD6O75340 191 aa9.96□□□□□ -0.82
PTPRF-213ENST00000481019 OR7C1O76099 320 aaPredicted RBP9.96□□□□□ -0.82
PTPRF-213ENST00000481019 CD3GP09693 182 aa9.96□□□□□ -0.82
PTPRF-213ENST00000481019 ZNF728P0DKX0 622 aa9.96□□□□□ -0.82
PTPRF-213ENST00000481019 COX7A1P24310 79 aa9.96□□□□□ -0.82
PTPRF-213ENST00000481019 RCVRNP35243 200 aa9.96□□□□□ -0.82
PTPRF-213ENST00000481019 SAA4P35542 130 aa9.96□□□□□ -0.82
PTPRF-213ENST00000481019 UBE2E1P51965 193 aa9.96□□□□□ -0.82
PTPRF-213ENST00000481019 TAF9Q16594 264 aa9.96□□□□□ -0.82
PTPRF-213ENST00000481019 LDLRAD2Q5SZI1 272 aa9.96□□□□□ -0.82
PTPRF-213ENST00000481019 Q6YL49 198 aa9.96□□□□□ -0.82
PTPRF-213ENST00000481019 LYSMD2Q8IV50 215 aa9.96□□□□□ -0.82
PTPRF-213ENST00000481019 OR5D13Q8NGL4 314 aa9.96□□□□□ -0.82
PTPRF-213ENST00000481019 PPP1R35Q8TAP8 253 aa9.96□□□□□ -0.82
PTPRF-213ENST00000481019 MTFP1Q9UDX5 166 aa9.96□□□□□ -0.82
PTPRF-213ENST00000481019 CMYA5Q8N3K9 4069 aa9.96□□□□□ -0.82
PTPRF-213ENST00000481019 KIAA2026Q5HYC2 2103 aa9.95□□□□□ -0.82
PTPRF-213ENST00000481019 TRAV39A0A0B4J263 110 aa9.95□□□□□ -0.82
PTPRF-213ENST00000481019 SOCS1O15524 211 aa9.95□□□□□ -0.82
PTPRF-213ENST00000481019 PTTG1O95997 202 aa9.95□□□□□ -0.82
PTPRF-213ENST00000481019 TBPP20226 339 aa9.95□□□□□ -0.82
PTPRF-213ENST00000481019 ERP29P30040 261 aaKnown RBP9.95□□□□□ -0.82
PTPRF-213ENST00000481019 KCNJ3P48549 501 aa9.95□□□□□ -0.82
PTPRF-213ENST00000481019 TMEM50BP56557 158 aa9.95□□□□□ -0.82
PTPRF-213ENST00000481019 MEF2CQ06413 473 aaPredicted RBP9.95□□□□□ -0.82
PTPRF-213ENST00000481019 PLA2G7Q13093 441 aa9.95□□□□□ -0.82
PTPRF-213ENST00000481019 BAK1Q16611 211 aa9.95□□□□□ -0.82
PTPRF-213ENST00000481019 ATAD3CQ5T2N8 411 aa9.95□□□□□ -0.82
PTPRF-213ENST00000481019 STEAP3Q658P3 488 aa9.95□□□□□ -0.82
PTPRF-213ENST00000481019 IZUMO1Q8IYV9 350 aa9.95□□□□□ -0.82
PTPRF-213ENST00000481019 POC5Q8NA72 575 aa9.95□□□□□ -0.82
PTPRF-213ENST00000481019 SUMF2Q8NBJ7 301 aa9.95□□□□□ -0.82
PTPRF-213ENST00000481019 GPX8Q8TED1 209 aa9.95□□□□□ -0.82
PTPRF-213ENST00000481019 FAM216AQ8WUB2 273 aa9.95□□□□□ -0.82
PTPRF-213ENST00000481019 SDHCQ99643 169 aaPredicted RBP9.95□□□□□ -0.82
PTPRF-213ENST00000481019 PECRQ9BY49 303 aa9.95□□□□□ -0.82
PTPRF-213ENST00000481019 IFT46Q9NQC8 304 aa9.95□□□□□ -0.82
PTPRF-213ENST00000481019 MGAT4AQ9UM21 535 aa9.95□□□□□ -0.82
PTPRF-213ENST00000481019 RBMX2Q9Y388 322 aaKnown RBP9.95□□□□□ -0.82
PTPRF-213ENST00000481019 ODAMA1E959 279 aa9.94□□□□□ -0.82
PTPRF-213ENST00000481019 MEIOCA2RUB1 952 aa9.94□□□□□ -0.82
PTPRF-213ENST00000481019 TRIM77I1YAP6 450 aa9.94□□□□□ -0.82
PTPRF-213ENST00000481019 MFNGO00587 321 aa9.94□□□□□ -0.82
PTPRF-213ENST00000481019 ORC5O43913 435 aa9.94□□□□□ -0.82
PTPRF-213ENST00000481019 IGHV4-59P01825 116 aa9.94□□□□□ -0.82
PTPRF-213ENST00000481019 IGHV1-8P0DP01 117 aa9.94□□□□□ -0.82
PTPRF-213ENST00000481019 GNB3P16520 340 aa9.94□□□□□ -0.82
PTPRF-213ENST00000481019 DTYMKP23919 212 aa9.94□□□□□ -0.82
PTPRF-213ENST00000481019 CHATP28329 748 aa9.94□□□□□ -0.82
PTPRF-213ENST00000481019 TAS2R19P59542 299 aa9.94□□□□□ -0.82
PTPRF-213ENST00000481019 BPIFB3P59826 476 aa9.94□□□□□ -0.82
PTPRF-213ENST00000481019 ASAH1Q13510 395 aa9.94□□□□□ -0.82
PTPRF-213ENST00000481019 ACTBL2Q562R1 376 aa9.94□□□□□ -0.82
PTPRF-213ENST00000481019 PAN3Q58A45 887 aaKnown RBP9.94□□□□□ -0.82
PTPRF-213ENST00000481019 KRBOX4Q5JUW0 171 aa9.94□□□□□ -0.82
PTPRF-213ENST00000481019 NKAPLQ5M9Q1 402 aa9.94□□□□□ -0.82
PTPRF-213ENST00000481019 PRAMEF5Q5TYX0 476 aa9.94□□□□□ -0.82
PTPRF-213ENST00000481019 RSBN1Q5VWQ0 802 aaPredicted RBP9.94□□□□□ -0.82
PTPRF-213ENST00000481019 NCR3LG1Q68D85 454 aa9.94□□□□□ -0.82
PTPRF-213ENST00000481019 RBMS3Q6XE24 437 aaKnown RBP9.94□□□□□ -0.82
PTPRF-213ENST00000481019 LHFPL4Q7Z7J7 247 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms