RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 SLC2A8Q9NY64 477 aa14.52□□□□□ -0.09
UPF3A-206ENST00000480362 CALYQ9NYX4 217 aa14.52□□□□□ -0.09
UPF3A-206ENST00000480362 OPN4Q9UHM6 478 aa14.52□□□□□ -0.09
UPF3A-206ENST00000480362 UBE2J1Q9Y385 318 aaPredicted RBP14.52□□□□□ -0.09
UPF3A-206ENST00000480362 GCN1Q92616 2671 aaKnown RBP14.52□□□□□ -0.09
UPF3A-206ENST00000480362 TRBV6-7A0A0A0MS04 114 aa14.51□□□□□ -0.09
UPF3A-206ENST00000480362 TRBV23-1A0A0A0MS06 115 aa14.51□□□□□ -0.09
UPF3A-206ENST00000480362 ZNF729A6NN14 1252 aaPredicted RBP14.51□□□□□ -0.09
UPF3A-206ENST00000480362 PHF1O43189 567 aaPredicted RBP14.51□□□□□ -0.09
UPF3A-206ENST00000480362 NFYAP23511 347 aaPredicted RBP14.51□□□□□ -0.09
UPF3A-206ENST00000480362 FCGR2CP31995 323 aa14.51□□□□□ -0.09
UPF3A-206ENST00000480362 ESCO2Q56NI9 601 aa14.51□□□□□ -0.09
UPF3A-206ENST00000480362 ZNF660Q6AZW8 331 aaPredicted RBP14.51□□□□□ -0.09
UPF3A-206ENST00000480362 OR13C8Q8NGS7 320 aa14.51□□□□□ -0.09
UPF3A-206ENST00000480362 OR10J5Q8NHC4 309 aa14.51□□□□□ -0.09
UPF3A-206ENST00000480362 TERB2Q8NHR7 220 aa14.51□□□□□ -0.09
UPF3A-206ENST00000480362 GIMAP1Q8WWP7 306 aa14.51□□□□□ -0.09
UPF3A-206ENST00000480362 NINJ1Q92982 152 aa14.51□□□□□ -0.09
UPF3A-206ENST00000480362 GINS4Q9BRT9 223 aa14.51□□□□□ -0.09
UPF3A-206ENST00000480362 SSBP3Q9BWW4 388 aaPredicted RBP14.51□□□□□ -0.09
UPF3A-206ENST00000480362 TAS2R3Q9NYW6 316 aa14.51□□□□□ -0.09
UPF3A-206ENST00000480362 OR1A1Q9P1Q5 309 aa14.51□□□□□ -0.09
UPF3A-206ENST00000480362 COPZ2Q9P299 210 aa14.51□□□□□ -0.09
UPF3A-206ENST00000480362 SLC23A1Q9UHI7 598 aa14.51□□□□□ -0.09
UPF3A-206ENST00000480362 KIAA2026Q5HYC2 2103 aa14.5□□□□□ -0.09
UPF3A-206ENST00000480362 KBTBD11-OT1A0A1B0GTJ5 212 aa14.5□□□□□ -0.09
UPF3A-206ENST00000480362 NDUFB6O95139 128 aa14.5□□□□□ -0.09
UPF3A-206ENST00000480362 PLET1Q6UQ28 207 aa14.5□□□□□ -0.09
UPF3A-206ENST00000480362 OR52L2PQ8NGH6 319 aa14.5□□□□□ -0.09
UPF3A-206ENST00000480362 RAB9BQ9NP90 201 aa14.5□□□□□ -0.09
UPF3A-206ENST00000480362 RPUSD1Q9UJJ7 312 aaKnown RBP14.5□□□□□ -0.09
UPF3A-206ENST00000480362 IGHV4-61A0A0C4DH41 118 aa14.49□□□□□ -0.09
UPF3A-206ENST00000480362 NPIPB11E5RHQ5 1161 aa14.49□□□□□ -0.09
UPF3A-206ENST00000480362 HSPA12AO43301 675 aa14.49□□□□□ -0.09
UPF3A-206ENST00000480362 DIRAS3O95661 229 aa14.49□□□□□ -0.09
UPF3A-206ENST00000480362 HEXAP06865 529 aa14.49□□□□□ -0.09
UPF3A-206ENST00000480362 CCL3L1P16619 93 aa14.49□□□□□ -0.09
UPF3A-206ENST00000480362 AADACP22760 399 aa14.49□□□□□ -0.09
UPF3A-206ENST00000480362 OMGP23515 440 aa14.49□□□□□ -0.09
UPF3A-206ENST00000480362 ZBTB25P24278 435 aa14.49□□□□□ -0.09
UPF3A-206ENST00000480362 HTD2P86397 168 aa14.49□□□□□ -0.09
UPF3A-206ENST00000480362 RBMS2Q15434 407 aaKnown RBP14.49□□□□□ -0.09
UPF3A-206ENST00000480362 LTC4SQ16873 150 aa14.49□□□□□ -0.09
UPF3A-206ENST00000480362 AADACL3Q5VUY0 350 aa14.49□□□□□ -0.09
UPF3A-206ENST00000480362 LHFPL1Q86WI0 220 aa14.49□□□□□ -0.09
UPF3A-206ENST00000480362 H1FOOQ8IZA3 346 aaPredicted RBP14.49□□□□□ -0.09
UPF3A-206ENST00000480362 C8orf46Q8TAG6 207 aa14.49□□□□□ -0.09
UPF3A-206ENST00000480362 MRGPRFQ96AM1 343 aa14.49□□□□□ -0.09
UPF3A-206ENST00000480362 RAB39BQ96DA2 213 aa14.49□□□□□ -0.09
UPF3A-206ENST00000480362 ZNF714Q96N38 554 aa14.49□□□□□ -0.09
UPF3A-206ENST00000480362 SLC25A21Q9BQT8 299 aaPredicted RBP14.49□□□□□ -0.09
UPF3A-206ENST00000480362 GAL3ST2Q9H3Q3 398 aa14.49□□□□□ -0.09
UPF3A-206ENST00000480362 ZNF69Q9UC07 566 aa14.49□□□□□ -0.09
UPF3A-206ENST00000480362 NUBP2Q9Y5Y2 271 aa14.49□□□□□ -0.09
UPF3A-206ENST00000480362 DSCAML1Q8TD84 2053 aa14.49□□□□□ -0.09
UPF3A-206ENST00000480362 TRAV6A0A075B6T7 132 aa14.48□□□□□ -0.09
UPF3A-206ENST00000480362 LOC105371242A0A075B767 164 aa14.48□□□□□ -0.09
UPF3A-206ENST00000480362 IGHV3-43A0A0B4J1X8 118 aa14.48□□□□□ -0.09
UPF3A-206ENST00000480362 PPIAL4CA0A0B4J2A2 164 aa14.48□□□□□ -0.09
UPF3A-206ENST00000480362 OR5H14A6NHG9 310 aa14.48□□□□□ -0.09
UPF3A-206ENST00000480362 F2RL2O00254 374 aa14.48□□□□□ -0.09
UPF3A-206ENST00000480362 ZNF728P0DKX0 622 aa14.48□□□□□ -0.09
UPF3A-206ENST00000480362 PPIAL4GP0DN37 164 aa14.48□□□□□ -0.09
UPF3A-206ENST00000480362 IGHV3-43DP0DP04 118 aa14.48□□□□□ -0.09
UPF3A-206ENST00000480362 FPR2P25090 351 aa14.48□□□□□ -0.09
UPF3A-206ENST00000480362 CEACAM6P40199 344 aa14.48□□□□□ -0.09
UPF3A-206ENST00000480362 CD276Q5ZPR3 534 aa14.48□□□□□ -0.09
UPF3A-206ENST00000480362 FAM53AQ6NSI3 398 aaPredicted RBP14.48□□□□□ -0.09
UPF3A-206ENST00000480362 LY6G5BQ8NDX9 201 aa14.48□□□□□ -0.09
UPF3A-206ENST00000480362 LINC00574Q9H8X3 128 aa14.48□□□□□ -0.09
UPF3A-206ENST00000480362 OR2S2Q9NQN1 319 aa14.48□□□□□ -0.09
UPF3A-206ENST00000480362 NUDT15Q9NV35 164 aa14.48□□□□□ -0.09
UPF3A-206ENST00000480362 IDI2-AS1Q9NZ38 188 aa14.48□□□□□ -0.09
UPF3A-206ENST00000480362 FLVCR2Q9UPI3 526 aa14.48□□□□□ -0.09
UPF3A-206ENST00000480362 FBN2P35556 2912 aa14.47□□□□□ -0.09
UPF3A-206ENST00000480362 KIAA1324LA8MWY0 1029 aaPredicted RBP14.47□□□□□ -0.09
UPF3A-206ENST00000480362 C22orf46C9J442 243 aa14.47□□□□□ -0.09
UPF3A-206ENST00000480362 ARPC1BO15143 372 aaKnown RBP14.47□□□□□ -0.09
UPF3A-206ENST00000480362 TUSC2O75896 110 aa14.47□□□□□ -0.09
UPF3A-206ENST00000480362 MMP23AO75900 390 aa14.47□□□□□ -0.09
UPF3A-206ENST00000480362 PPYP01298 95 aa14.47□□□□□ -0.09
UPF3A-206ENST00000480362 H2AFB2P0C5Z0 115 aa14.47□□□□□ -0.09
UPF3A-206ENST00000480362 SLC25A16P16260 332 aa14.47□□□□□ -0.09
UPF3A-206ENST00000480362 ZFP36P26651 326 aaKnown RBP14.47□□□□□ -0.09
UPF3A-206ENST00000480362 DLX6P56179 175 aa14.47□□□□□ -0.09
UPF3A-206ENST00000480362 FXYD4P59646 89 aa14.47□□□□□ -0.09
UPF3A-206ENST00000480362 HERV-K104P61576 105 aa14.47□□□□□ -0.09
UPF3A-206ENST00000480362 GNMTQ14749 295 aa14.47□□□□□ -0.09
UPF3A-206ENST00000480362 C11orf91Q3C1V1 193 aa14.47□□□□□ -0.09
UPF3A-206ENST00000480362 Q6ZNX1 250 aa14.47□□□□□ -0.09
UPF3A-206ENST00000480362 MARCH1Q8TCQ1 289 aa14.47□□□□□ -0.09
UPF3A-206ENST00000480362 UPRTQ96BW1 309 aa14.47□□□□□ -0.09
UPF3A-206ENST00000480362 MARVELD1Q9BSK0 173 aa14.47□□□□□ -0.09
UPF3A-206ENST00000480362 C20orf85Q9H1P6 137 aa14.47□□□□□ -0.09
UPF3A-206ENST00000480362 RDH8Q9NYR8 311 aa14.47□□□□□ -0.09
UPF3A-206ENST00000480362 A0A1W2PPH5 198 aa14.46□□□□□ -0.09
UPF3A-206ENST00000480362 FAM172BPA6NC97 362 aa14.46□□□□□ -0.09
UPF3A-206ENST00000480362 PPP1CCP36873 323 aaKnown RBP14.46□□□□□ -0.09
UPF3A-206ENST00000480362 RAB25P57735 213 aa14.46□□□□□ -0.09
UPF3A-206ENST00000480362 LOXL3P58215 753 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms