RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 TSPAN31Q12999 210 aa8.67□□□□□ -1.02
USP11-208ENST00000480104 ANKRD55Q3KP44 614 aa8.67□□□□□ -1.02
USP11-208ENST00000480104 LINC00596Q86U02 117 aa8.67□□□□□ -1.02
USP11-208ENST00000480104 ZDHHC13Q8IUH4 622 aa8.67□□□□□ -1.02
USP11-208ENST00000480104 TCEANCQ8N8B7 351 aa8.67□□□□□ -1.02
USP11-208ENST00000480104 OR11H2Q8NH07 326 aa8.67□□□□□ -1.02
USP11-208ENST00000480104 CACNG8Q8WXS5 425 aa8.67□□□□□ -1.02
USP11-208ENST00000480104 BORCS8Q96FH0 119 aa8.67□□□□□ -1.02
USP11-208ENST00000480104 GTF2A1LQ9UNN4 478 aa8.67□□□□□ -1.02
USP11-208ENST00000480104 IGKV1-12A0A0C4DH73 117 aa8.66□□□□□ -1.02
USP11-208ENST00000480104 DHRS7CA6NNS2 312 aa8.66□□□□□ -1.02
USP11-208ENST00000480104 H3BUA1 57 aa8.66□□□□□ -1.02
USP11-208ENST00000480104 BMPR1BO00238 502 aa8.66□□□□□ -1.02
USP11-208ENST00000480104 IGKV1D-12P01611 117 aa8.66□□□□□ -1.02
USP11-208ENST00000480104 HLA-DMBP28068 263 aa8.66□□□□□ -1.02
USP11-208ENST00000480104 RPS16P62249 146 aaKnown RBP8.66□□□□□ -1.02
USP11-208ENST00000480104 PLGLAQ15195 96 aa8.66□□□□□ -1.02
USP11-208ENST00000480104 RSBN1Q5VWQ0 802 aaPredicted RBP8.66□□□□□ -1.02
USP11-208ENST00000480104 ZNF57Q68EA5 555 aaPredicted RBP8.66□□□□□ -1.02
USP11-208ENST00000480104 LYPD1Q8N2G4 141 aa8.66□□□□□ -1.02
USP11-208ENST00000480104 OR5T1Q8NG75 326 aa8.66□□□□□ -1.02
USP11-208ENST00000480104 SNAPC3Q92966 411 aa8.66□□□□□ -1.02
USP11-208ENST00000480104 OTULINQ96BN8 352 aa8.66□□□□□ -1.02
USP11-208ENST00000480104 NCOR1P1Q9H4R4 102 aa8.66□□□□□ -1.02
USP11-208ENST00000480104 INTS9Q9NV88 658 aaKnown RBP8.66□□□□□ -1.02
USP11-208ENST00000480104 GFOD1Q9NXC2 390 aa8.66□□□□□ -1.02
USP11-208ENST00000480104 PRR32B1ATL7 298 aa8.65□□□□□ -1.02
USP11-208ENST00000480104 DEGS1O15121 323 aa8.65□□□□□ -1.02
USP11-208ENST00000480104 LANCL1O43813 399 aa8.65□□□□□ -1.02
USP11-208ENST00000480104 ALOX5APP20292 161 aa8.65□□□□□ -1.02
USP11-208ENST00000480104 AADACP22760 399 aa8.65□□□□□ -1.02
USP11-208ENST00000480104 ZNF829Q3KNS6 432 aaPredicted RBP8.65□□□□□ -1.02
USP11-208ENST00000480104 PAN3Q58A45 887 aaKnown RBP8.65□□□□□ -1.02
USP11-208ENST00000480104 RPL13AP3Q6NVV1 102 aa8.65□□□□□ -1.02
USP11-208ENST00000480104 UBE2DNLQ8IWF7 75 aa8.65□□□□□ -1.02
USP11-208ENST00000480104 PLPPR1Q8TBJ4 325 aa8.65□□□□□ -1.02
USP11-208ENST00000480104 GNPDA2Q8TDQ7 276 aa8.65□□□□□ -1.02
USP11-208ENST00000480104 MRPL20Q9BYC9 149 aaKnown RBP8.65□□□□□ -1.02
USP11-208ENST00000480104 HRH4Q9H3N8 390 aa8.65□□□□□ -1.02
USP11-208ENST00000480104 MAP6D1Q9H9H5 199 aa8.65□□□□□ -1.02
USP11-208ENST00000480104 MDFICQ9P1T7 246 aa8.65□□□□□ -1.02
USP11-208ENST00000480104 UBQLN2Q9UHD9 624 aa8.65□□□□□ -1.02
USP11-208ENST00000480104 LRP2P98164 4655 aa8.65□□□□□ -1.03
USP11-208ENST00000480104 LRP1Q07954 4544 aaKnown RBP8.64□□□□□ -1.03
USP11-208ENST00000480104 RIIAD1A6NNX1 92 aa8.64□□□□□ -1.03
USP11-208ENST00000480104 RRHO14718 337 aa8.64□□□□□ -1.03
USP11-208ENST00000480104 RGS16O15492 202 aaPredicted RBP8.64□□□□□ -1.03
USP11-208ENST00000480104 GATBO75879 557 aaKnown RBP8.64□□□□□ -1.03
USP11-208ENST00000480104 IFNGP01579 166 aa8.64□□□□□ -1.03
USP11-208ENST00000480104 CD74P04233 296 aa8.64□□□□□ -1.03
USP11-208ENST00000480104 ZNF3P17036 446 aa8.64□□□□□ -1.03
USP11-208ENST00000480104 HCCSP53701 268 aa8.64□□□□□ -1.03
USP11-208ENST00000480104 CDK5R1Q15078 307 aa8.64□□□□□ -1.03
USP11-208ENST00000480104 BCL2L15Q5TBC7 163 aa8.64□□□□□ -1.03
USP11-208ENST00000480104 Q6ZSR3 168 aa8.64□□□□□ -1.03
USP11-208ENST00000480104 ZNF367Q7RTV3 350 aa8.64□□□□□ -1.03
USP11-208ENST00000480104 ZNF439Q8NDP4 499 aa8.64□□□□□ -1.03
USP11-208ENST00000480104 OR52M1Q8NGK5 317 aa8.64□□□□□ -1.03
USP11-208ENST00000480104 GRPEL2Q8TAA5 225 aa8.64□□□□□ -1.03
USP11-208ENST00000480104 C7orf34Q96L11 122 aa8.64□□□□□ -1.03
USP11-208ENST00000480104 CLCC1Q96S66 551 aa8.64□□□□□ -1.03
USP11-208ENST00000480104 NDUFAF3Q9BU61 184 aa8.64□□□□□ -1.03
USP11-208ENST00000480104 TSSK6Q9BXA6 273 aa8.64□□□□□ -1.03
USP11-208ENST00000480104 TTTY10Q9BZA0 68 aa8.64□□□□□ -1.03
USP11-208ENST00000480104 CHST5Q9GZS9 411 aa8.64□□□□□ -1.03
USP11-208ENST00000480104 OR51V1Q9H2C8 321 aa8.64□□□□□ -1.03
USP11-208ENST00000480104 MLXQ9UH92 298 aa8.64□□□□□ -1.03
USP11-208ENST00000480104 LAMP5Q9UJQ1 280 aa8.64□□□□□ -1.03
USP11-208ENST00000480104 TRAV24A0A0B4J272 114 aa8.63□□□□□ -1.03
USP11-208ENST00000480104 H0YJX3 145 aa8.63□□□□□ -1.03
USP11-208ENST00000480104 RBMXL2O75526 392 aaKnown RBP8.63□□□□□ -1.03
USP11-208ENST00000480104 IFNGR2P38484 337 aa8.63□□□□□ -1.03
USP11-208ENST00000480104 RBP2P50120 134 aa8.63□□□□□ -1.03
USP11-208ENST00000480104 ZNF134P52741 427 aa8.63□□□□□ -1.03
USP11-208ENST00000480104 ATP1B3P54709 279 aa8.63□□□□□ -1.03
USP11-208ENST00000480104 KRTAP10-2P60368 255 aa8.63□□□□□ -1.03
USP11-208ENST00000480104 SF3A3Q12874 501 aaKnown RBP eCLIP8.63□□□□□ -1.03
USP11-208ENST00000480104 PDZK1IP1Q13113 114 aa8.63□□□□□ -1.03
USP11-208ENST00000480104 CT45A1Q5HYN5 189 aa8.63□□□□□ -1.03
USP11-208ENST00000480104 DEGS2Q6QHC5 323 aa8.63□□□□□ -1.03
USP11-208ENST00000480104 KCTD20Q7Z5Y7 419 aa8.63□□□□□ -1.03
USP11-208ENST00000480104 OR1L6Q8NGR2 347 aa8.63□□□□□ -1.03
USP11-208ENST00000480104 OR4A5Q8NH83 315 aa8.63□□□□□ -1.03
USP11-208ENST00000480104 CT45A3Q8NHU0 189 aa8.63□□□□□ -1.03
USP11-208ENST00000480104 RFT1Q96AA3 541 aa8.63□□□□□ -1.03
USP11-208ENST00000480104 MROQ9BYG7 248 aa8.63□□□□□ -1.03
USP11-208ENST00000480104 FAM118AQ9NWS6 357 aa8.63□□□□□ -1.03
USP11-208ENST00000480104 IL20Q9NYY1 176 aa8.63□□□□□ -1.03
USP11-208ENST00000480104 C15orf65H3BRN8 121 aa8.62□□□□□ -1.03
USP11-208ENST00000480104 E2F6O75461 281 aa8.62□□□□□ -1.03
USP11-208ENST00000480104 SRSF10O75494 262 aaKnown RBP8.62□□□□□ -1.03
USP11-208ENST00000480104 KDM4BO94953 1096 aa8.62□□□□□ -1.03
USP11-208ENST00000480104 S1PR2O95136 353 aa8.62□□□□□ -1.03
USP11-208ENST00000480104 GADD45GO95257 159 aa8.62□□□□□ -1.03
USP11-208ENST00000480104 CBLN1P23435 193 aa8.62□□□□□ -1.03
USP11-208ENST00000480104 MTCP1P56278 107 aa8.62□□□□□ -1.03
USP11-208ENST00000480104 SPATS1Q496A3 300 aa8.62□□□□□ -1.03
USP11-208ENST00000480104 SAMD4BQ5PRF9 694 aaKnown RBP8.62□□□□□ -1.03
USP11-208ENST00000480104 ELMOD2Q8IZ81 293 aa8.62□□□□□ -1.03
USP11-208ENST00000480104 ARL11Q969Q4 196 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms