RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 GFOD1Q9NXC2 390 aa10.4□□□□□ -0.74
ABCF1-206ENST00000479542 ING3Q9NXR8 418 aa10.4□□□□□ -0.74
ABCF1-206ENST00000479542 DIMT1Q9UNQ2 313 aaKnown RBP10.4□□□□□ -0.74
ABCF1-206ENST00000479542 DHDHQ9UQ10 334 aa10.4□□□□□ -0.74
ABCF1-206ENST00000479542 ZNF256Q9Y2P7 627 aaPredicted RBP10.4□□□□□ -0.74
ABCF1-206ENST00000479542 TMEM30CPA0ZSE6 113 aa10.39□□□□□ -0.75
ABCF1-206ENST00000479542 SEC14L6B5MCN3 397 aa10.39□□□□□ -0.75
ABCF1-206ENST00000479542 GABRPO00591 440 aa10.39□□□□□ -0.75
ABCF1-206ENST00000479542 ZNF780AO75290 641 aaPredicted RBP10.39□□□□□ -0.75
ABCF1-206ENST00000479542 PPIFP30405 207 aaKnown RBP10.39□□□□□ -0.75
ABCF1-206ENST00000479542 RSU1Q15404 277 aa10.39□□□□□ -0.75
ABCF1-206ENST00000479542 MPV17LQ2QL34 196 aa10.39□□□□□ -0.75
ABCF1-206ENST00000479542 CCDC58Q4VC31 144 aa10.39□□□□□ -0.75
ABCF1-206ENST00000479542 LAIR2Q6ISS4 152 aa10.39□□□□□ -0.75
ABCF1-206ENST00000479542 RPL22L1Q6P5R6 122 aaKnown RBP10.39□□□□□ -0.75
ABCF1-206ENST00000479542 TMPRSS11AQ6ZMR5 421 aa10.39□□□□□ -0.75
ABCF1-206ENST00000479542 SLC25A48Q6ZT89 311 aaKnown RBP10.39□□□□□ -0.75
ABCF1-206ENST00000479542 SUMF2Q8NBJ7 301 aa10.39□□□□□ -0.75
ABCF1-206ENST00000479542 TSEN15Q8WW01 171 aaKnown RBP10.39□□□□□ -0.75
ABCF1-206ENST00000479542 GGHQ92820 318 aa10.39□□□□□ -0.75
ABCF1-206ENST00000479542 NR1H4Q96RI1 486 aaPredicted RBP10.39□□□□□ -0.75
ABCF1-206ENST00000479542 CLEC2DQ9UHP7 191 aa10.39□□□□□ -0.75
ABCF1-206ENST00000479542 ST3GAL6Q9Y274 331 aa10.39□□□□□ -0.75
ABCF1-206ENST00000479542 EXOSC1Q9Y3B2 195 aaKnown RBP10.39□□□□□ -0.75
ABCF1-206ENST00000479542 SMAD5-AS1Q9Y6J3 95 aa10.39□□□□□ -0.75
ABCF1-206ENST00000479542 SORL1Q92673 2214 aa10.39□□□□□ -0.75
ABCF1-206ENST00000479542 I3L521 148 aa10.38□□□□□ -0.75
ABCF1-206ENST00000479542 HSPB6O14558 160 aa10.38□□□□□ -0.75
ABCF1-206ENST00000479542 OGG1O15527 345 aa10.38□□□□□ -0.75
ABCF1-206ENST00000479542 LALBAP00709 142 aa10.38□□□□□ -0.75
ABCF1-206ENST00000479542 IGHV3-7P01780 117 aa10.38□□□□□ -0.75
ABCF1-206ENST00000479542 OR8U8P0C7N1 319 aa10.38□□□□□ -0.75
ABCF1-206ENST00000479542 MYL12AP19105 171 aa10.38□□□□□ -0.75
ABCF1-206ENST00000479542 VDAC1P21796 283 aa10.38□□□□□ -0.75
ABCF1-206ENST00000479542 SOX6P35712 828 aa10.38□□□□□ -0.75
ABCF1-206ENST00000479542 VHLP40337 213 aa10.38□□□□□ -0.75
ABCF1-206ENST00000479542 ECI1P42126 302 aa10.38□□□□□ -0.75
ABCF1-206ENST00000479542 SOX2P48431 317 aa10.38□□□□□ -0.75
ABCF1-206ENST00000479542 GNG10P50151 68 aa10.38□□□□□ -0.75
ABCF1-206ENST00000479542 LUMP51884 338 aaPredicted RBP10.38□□□□□ -0.75
ABCF1-206ENST00000479542 RBM11P57052 281 aaKnown RBP10.38□□□□□ -0.75
ABCF1-206ENST00000479542 KIAA0141Q14154 515 aaPredicted RBP10.38□□□□□ -0.75
ABCF1-206ENST00000479542 ZNF429Q86V71 674 aa10.38□□□□□ -0.75
ABCF1-206ENST00000479542 C8orf59Q8N0T1 100 aaPredicted RBP10.38□□□□□ -0.75
ABCF1-206ENST00000479542 GAPTQ8N292 157 aa10.38□□□□□ -0.75
ABCF1-206ENST00000479542 OR52N1Q8NH53 320 aa10.38□□□□□ -0.75
ABCF1-206ENST00000479542 TNFAIP8L1Q8WVP5 186 aa10.38□□□□□ -0.75
ABCF1-206ENST00000479542 ARL11Q969Q4 196 aa10.38□□□□□ -0.75
ABCF1-206ENST00000479542 MRPS24Q96EL2 167 aaKnown RBP10.38□□□□□ -0.75
ABCF1-206ENST00000479542 TMEM80Q96HE8 168 aa10.38□□□□□ -0.75
ABCF1-206ENST00000479542 DUX3Q96PT4 197 aa10.38□□□□□ -0.75
ABCF1-206ENST00000479542 GPER1Q99527 375 aa10.38□□□□□ -0.75
ABCF1-206ENST00000479542 METTL9Q9H1A3 318 aa10.38□□□□□ -0.75
ABCF1-206ENST00000479542 BABAM2Q9NXR7 383 aa10.38□□□□□ -0.75
ABCF1-206ENST00000479542 NKX1-2Q9UD57 310 aaPredicted RBP10.38□□□□□ -0.75
ABCF1-206ENST00000479542 DNAH7Q8WXX0 4024 aa10.38□□□□□ -0.75
ABCF1-206ENST00000479542 FAM90A10PA6NDY2 464 aa10.37□□□□□ -0.75
ABCF1-206ENST00000479542 SDCBPO00560 298 aaPredicted RBP10.37□□□□□ -0.75
ABCF1-206ENST00000479542 CA11O75493 328 aa10.37□□□□□ -0.75
ABCF1-206ENST00000479542 MT-ND4P03905 459 aa10.37□□□□□ -0.75
ABCF1-206ENST00000479542 CD2P06729 351 aa10.37□□□□□ -0.75
ABCF1-206ENST00000479542 ST3GAL4Q11206 333 aa10.37□□□□□ -0.75
ABCF1-206ENST00000479542 GPR176Q14439 515 aa10.37□□□□□ -0.75
ABCF1-206ENST00000479542 PIGYQ3MUY2 71 aa10.37□□□□□ -0.75
ABCF1-206ENST00000479542 CASC10Q5T4H9 136 aa10.37□□□□□ -0.75
ABCF1-206ENST00000479542 ZNF497Q6ZNH5 498 aa10.37□□□□□ -0.75
ABCF1-206ENST00000479542 ZNF554Q86TJ5 538 aa10.37□□□□□ -0.75
ABCF1-206ENST00000479542 ZNF485Q8NCK3 441 aa10.37□□□□□ -0.75
ABCF1-206ENST00000479542 ZNF439Q8NDP4 499 aa10.37□□□□□ -0.75
ABCF1-206ENST00000479542 OR11H1Q8NG94 326 aa10.37□□□□□ -0.75
ABCF1-206ENST00000479542 MUC7Q8TAX7 377 aa10.37□□□□□ -0.75
ABCF1-206ENST00000479542 GPR148Q8TDV2 347 aa10.37□□□□□ -0.75
ABCF1-206ENST00000479542 FBLIM1Q8WUP2 373 aa10.37□□□□□ -0.75
ABCF1-206ENST00000479542 PRR25Q96S07 402 aa10.37□□□□□ -0.75
ABCF1-206ENST00000479542 SPACA1Q9HBV2 294 aa10.37□□□□□ -0.75
ABCF1-206ENST00000479542 TMEM138Q9NPI0 162 aa10.37□□□□□ -0.75
ABCF1-206ENST00000479542 EFCAB10A6NFE3 127 aa10.36□□□□□ -0.75
ABCF1-206ENST00000479542 LANCL1O43813 399 aa10.36□□□□□ -0.75
ABCF1-206ENST00000479542 GPX5O75715 221 aa10.36□□□□□ -0.75
ABCF1-206ENST00000479542 OR7C1O76099 320 aaPredicted RBP10.36□□□□□ -0.75
ABCF1-206ENST00000479542 HTR3BO95264 441 aa10.36□□□□□ -0.75
ABCF1-206ENST00000479542 IGLV1-40P01703 118 aa10.36□□□□□ -0.75
ABCF1-206ENST00000479542 CSTBP04080 98 aaKnown RBP10.36□□□□□ -0.75
ABCF1-206ENST00000479542 GLAP06280 429 aa10.36□□□□□ -0.75
ABCF1-206ENST00000479542 RAB25P57735 213 aa10.36□□□□□ -0.75
ABCF1-206ENST00000479542 MED21Q13503 144 aa10.36□□□□□ -0.75
ABCF1-206ENST00000479542 LTC4SQ16873 150 aa10.36□□□□□ -0.75
ABCF1-206ENST00000479542 DEFB136Q30KP8 78 aa10.36□□□□□ -0.75
ABCF1-206ENST00000479542 ZNF260Q3ZCT1 412 aa10.36□□□□□ -0.75
ABCF1-206ENST00000479542 LY6G6FQ5SQ64 297 aa10.36□□□□□ -0.75
ABCF1-206ENST00000479542 TRAT1Q6PIZ9 186 aa10.36□□□□□ -0.75
ABCF1-206ENST00000479542 ZNF491Q8N8L2 437 aa10.36□□□□□ -0.75
ABCF1-206ENST00000479542 OR51A2Q8NGJ7 313 aa10.36□□□□□ -0.75
ABCF1-206ENST00000479542 SMIM19Q96E16 107 aa10.36□□□□□ -0.75
ABCF1-206ENST00000479542 KCTD7Q96MP8 289 aa10.36□□□□□ -0.75
ABCF1-206ENST00000479542 PLCXD1Q9NUJ7 323 aa10.36□□□□□ -0.75
ABCF1-206ENST00000479542 TAS2R4Q9NYW5 299 aa10.36□□□□□ -0.75
ABCF1-206ENST00000479542 CNOT2Q9NZN8 540 aaKnown RBP10.36□□□□□ -0.75
ABCF1-206ENST00000479542 RCC2Q9P258 522 aaKnown RBP10.36□□□□□ -0.75
ABCF1-206ENST00000479542 PSORS1C1Q9UIG5 152 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms