RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 YIF1BQ5BJH7 314 aa13.72□□□□□ -0.21
ECHDC1-216ENST00000479525 OR10K2Q6IF99 312 aa13.72□□□□□ -0.21
ECHDC1-216ENST00000479525 RAB12Q6IQ22 244 aa13.72□□□□□ -0.21
ECHDC1-216ENST00000479525 SLC35E3Q7Z769 313 aa13.72□□□□□ -0.21
ECHDC1-216ENST00000479525 STX19Q8N4C7 294 aa13.72□□□□□ -0.21
ECHDC1-216ENST00000479525 WFDC9Q8NEX5 89 aa13.72□□□□□ -0.21
ECHDC1-216ENST00000479525 PCDHB16Q9NRJ7 776 aa13.72□□□□□ -0.21
ECHDC1-216ENST00000479525 CKLFQ9UBR5 152 aa13.72□□□□□ -0.21
ECHDC1-216ENST00000479525 NUDT19A8MXV4 375 aa13.71□□□□□ -0.21
ECHDC1-216ENST00000479525 MCRIP1C9JLW8 97 aa13.71□□□□□ -0.21
ECHDC1-216ENST00000479525 M0QZK8 103 aa13.71□□□□□ -0.21
ECHDC1-216ENST00000479525 MYL12BO14950 172 aa13.71□□□□□ -0.21
ECHDC1-216ENST00000479525 GAPDHP04406 335 aaKnown RBP13.71□□□□□ -0.21
ECHDC1-216ENST00000479525 MGMTP16455 207 aa13.71□□□□□ -0.21
ECHDC1-216ENST00000479525 FSTP19883 344 aa13.71□□□□□ -0.21
ECHDC1-216ENST00000479525 CAPGP40121 348 aa13.71□□□□□ -0.21
ECHDC1-216ENST00000479525 RPL23AP62750 156 aaKnown RBP13.71□□□□□ -0.21
ECHDC1-216ENST00000479525 SLC35A2P78381 396 aa13.71□□□□□ -0.21
ECHDC1-216ENST00000479525 SIGIRRQ6IA17 410 aa13.71□□□□□ -0.21
ECHDC1-216ENST00000479525 REC114Q7Z4M0 266 aa13.71□□□□□ -0.21
ECHDC1-216ENST00000479525 C8orf59Q8N0T1 100 aaPredicted RBP13.71□□□□□ -0.21
ECHDC1-216ENST00000479525 LINC00482Q8N8I6 264 aa13.71□□□□□ -0.21
ECHDC1-216ENST00000479525 KLHL30-AS1Q8NEE0 82 aa13.71□□□□□ -0.21
ECHDC1-216ENST00000479525 TFAP2CQ92754 450 aa13.71□□□□□ -0.21
ECHDC1-216ENST00000479525 PAK1IP1Q9NWT1 392 aaPredicted RBP13.71□□□□□ -0.21
ECHDC1-216ENST00000479525 PSORS1C1Q9UIG5 152 aa13.71□□□□□ -0.21
ECHDC1-216ENST00000479525 GPX5O75715 221 aa13.71□□□□□ -0.22
ECHDC1-216ENST00000479525 HBZP02008 142 aa13.71□□□□□ -0.22
ECHDC1-216ENST00000479525 GZMHP20718 246 aa13.71□□□□□ -0.22
ECHDC1-216ENST00000479525 MED21Q13503 144 aa13.71□□□□□ -0.22
ECHDC1-216ENST00000479525 DEFB136Q30KP8 78 aa13.71□□□□□ -0.22
ECHDC1-216ENST00000479525 NKAPLQ5M9Q1 402 aa13.71□□□□□ -0.22
ECHDC1-216ENST00000479525 OR2W3Q7Z3T1 314 aa13.71□□□□□ -0.22
ECHDC1-216ENST00000479525 LINC00596Q86U02 117 aa13.71□□□□□ -0.22
ECHDC1-216ENST00000479525 MRPL41Q8IXM3 137 aaKnown RBP13.71□□□□□ -0.22
ECHDC1-216ENST00000479525 STPG2Q8N412 459 aa13.71□□□□□ -0.22
ECHDC1-216ENST00000479525 Q8N9W7 124 aa13.71□□□□□ -0.22
ECHDC1-216ENST00000479525 OR10A7Q8NGE5 316 aa13.71□□□□□ -0.22
ECHDC1-216ENST00000479525 RTN4IP1Q8WWV3 396 aaPredicted RBP13.71□□□□□ -0.22
ECHDC1-216ENST00000479525 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.71□□□□□ -0.22
ECHDC1-216ENST00000479525 RCC2Q9P258 522 aaKnown RBP13.71□□□□□ -0.22
ECHDC1-216ENST00000479525 GNG12Q9UBI6 72 aa13.71□□□□□ -0.22
ECHDC1-216ENST00000479525 EFCAB10A6NFE3 127 aa13.7□□□□□ -0.22
ECHDC1-216ENST00000479525 ZNF780AO75290 641 aaPredicted RBP13.7□□□□□ -0.22
ECHDC1-216ENST00000479525 F2RL1P55085 397 aa13.7□□□□□ -0.22
ECHDC1-216ENST00000479525 WNT4P56705 351 aa13.7□□□□□ -0.22
ECHDC1-216ENST00000479525 RAB25P57735 213 aa13.7□□□□□ -0.22
ECHDC1-216ENST00000479525 CT45A1Q5HYN5 189 aa13.7□□□□□ -0.22
ECHDC1-216ENST00000479525 ZNF439Q8NDP4 499 aa13.7□□□□□ -0.22
ECHDC1-216ENST00000479525 OR52L2PQ8NGH6 319 aa13.7□□□□□ -0.22
ECHDC1-216ENST00000479525 CT45A3Q8NHU0 189 aa13.7□□□□□ -0.22
ECHDC1-216ENST00000479525 ST6GALNAC6Q969X2 333 aa13.7□□□□□ -0.22
ECHDC1-216ENST00000479525 HSPB9Q9BQS6 159 aa13.7□□□□□ -0.22
ECHDC1-216ENST00000479525 DNAH9Q9NYC9 4486 aa13.69□□□□□ -0.22
ECHDC1-216ENST00000479525 FGF16O43320 207 aa13.69□□□□□ -0.22
ECHDC1-216ENST00000479525 IGHG2P01859 326 aa13.69□□□□□ -0.22
ECHDC1-216ENST00000479525 RPLP1P05386 114 aaKnown RBP13.69□□□□□ -0.22
ECHDC1-216ENST00000479525 SLC2A2P11168 524 aaPredicted RBP13.69□□□□□ -0.22
ECHDC1-216ENST00000479525 MYF6P23409 242 aa13.69□□□□□ -0.22
ECHDC1-216ENST00000479525 GP2P55259 537 aaKnown RBP13.69□□□□□ -0.22
ECHDC1-216ENST00000479525 DEFB121Q5J5C9 76 aa13.69□□□□□ -0.22
ECHDC1-216ENST00000479525 OGFRL1Q5TC84 451 aaPredicted RBP13.69□□□□□ -0.22
ECHDC1-216ENST00000479525 LYPD6Q86Y78 171 aa13.69□□□□□ -0.22
ECHDC1-216ENST00000479525 LINC00311Q8N616 119 aa13.69□□□□□ -0.22
ECHDC1-216ENST00000479525 Q8N6K4 173 aa13.69□□□□□ -0.22
ECHDC1-216ENST00000479525 PACRGLQ8N7B6 248 aa13.69□□□□□ -0.22
ECHDC1-216ENST00000479525 CHPT1Q8WUD6 406 aa13.69□□□□□ -0.22
ECHDC1-216ENST00000479525 Q96M66 194 aa13.69□□□□□ -0.22
ECHDC1-216ENST00000479525 TMED9Q9BVK6 235 aa13.69□□□□□ -0.22
ECHDC1-216ENST00000479525 COL7A1Q02388 2944 aa13.68□□□□□ -0.22
ECHDC1-216ENST00000479525 ORC5O43913 435 aa13.68□□□□□ -0.22
ECHDC1-216ENST00000479525 CNTFRP26992 372 aa13.68□□□□□ -0.22
ECHDC1-216ENST00000479525 PPP1CCP36873 323 aaKnown RBP13.68□□□□□ -0.22
ECHDC1-216ENST00000479525 GPR12P47775 334 aa13.68□□□□□ -0.22
ECHDC1-216ENST00000479525 THBS3P49746 956 aa13.68□□□□□ -0.22
ECHDC1-216ENST00000479525 GABPB1Q06547 395 aaPredicted RBP13.68□□□□□ -0.22
ECHDC1-216ENST00000479525 EBI3Q14213 229 aa13.68□□□□□ -0.22
ECHDC1-216ENST00000479525 C11orf87Q6NUJ2 197 aa13.68□□□□□ -0.22
ECHDC1-216ENST00000479525 SLC16A12Q6ZSM3 486 aa13.68□□□□□ -0.22
ECHDC1-216ENST00000479525 TGIF2LXQ8IUE1 241 aa13.68□□□□□ -0.22
ECHDC1-216ENST00000479525 IZUMO1Q8IYV9 350 aa13.68□□□□□ -0.22
ECHDC1-216ENST00000479525 NANOGP1Q8N7R0 232 aa13.68□□□□□ -0.22
ECHDC1-216ENST00000479525 OR52M1Q8NGK5 317 aa13.68□□□□□ -0.22
ECHDC1-216ENST00000479525 OR2T10Q8NGZ9 312 aa13.68□□□□□ -0.22
ECHDC1-216ENST00000479525 MRPL30Q8TCC3 161 aaKnown RBP13.68□□□□□ -0.22
ECHDC1-216ENST00000479525 TAF9BQ9HBM6 251 aa13.68□□□□□ -0.22
ECHDC1-216ENST00000479525 PLSCR3Q9NRY6 295 aa13.68□□□□□ -0.22
ECHDC1-216ENST00000479525 CNOT2Q9NZN8 540 aaKnown RBP13.68□□□□□ -0.22
ECHDC1-216ENST00000479525 PTGES3LE9PB15 166 aa13.67□□□□□ -0.22
ECHDC1-216ENST00000479525 SPINT2O43291 252 aa13.67□□□□□ -0.22
ECHDC1-216ENST00000479525 IL3RAP26951 378 aa13.67□□□□□ -0.22
ECHDC1-216ENST00000479525 TAS2R43P59537 309 aa13.67□□□□□ -0.22
ECHDC1-216ENST00000479525 GPR176Q14439 515 aa13.67□□□□□ -0.22
ECHDC1-216ENST00000479525 RBM48Q5RL73 367 aaKnown RBP13.67□□□□□ -0.22
ECHDC1-216ENST00000479525 SLC25A48Q6ZT89 311 aaKnown RBP13.67□□□□□ -0.22
ECHDC1-216ENST00000479525 RCC1LQ96I51 464 aaKnown RBP13.67□□□□□ -0.22
ECHDC1-216ENST00000479525 RITA1Q96K30 269 aa13.67□□□□□ -0.22
ECHDC1-216ENST00000479525 S1PR3Q99500 378 aa13.67□□□□□ -0.22
ECHDC1-216ENST00000479525 SULT4A1Q9BR01 284 aa13.67□□□□□ -0.22
ECHDC1-216ENST00000479525 NICN1Q9BSH3 213 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms