RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 DNTTIP1Q9H147 329 aa5.52□□□□□ -1.53
USP48-208ENST00000479177 LIME1Q9H400 295 aa5.52□□□□□ -1.53
USP48-208ENST00000479177 RIMS4Q9H426 269 aaPredicted RBP5.52□□□□□ -1.53
USP48-208ENST00000479177 ZNF665Q9H7R5 613 aa5.52□□□□□ -1.53
USP48-208ENST00000479177 CHODLQ9H9P2 273 aa5.52□□□□□ -1.53
USP48-208ENST00000479177 TMEM165Q9HC07 324 aa5.52□□□□□ -1.53
USP48-208ENST00000479177 CHMP1AQ9HD42 196 aaPredicted RBP5.52□□□□□ -1.53
USP48-208ENST00000479177 MYOZ1Q9NP98 299 aaPredicted RBP5.52□□□□□ -1.53
USP48-208ENST00000479177 ZNF701Q9NV72 531 aaPredicted RBP5.52□□□□□ -1.53
USP48-208ENST00000479177 TAS2R8Q9NYW2 309 aa5.52□□□□□ -1.53
USP48-208ENST00000479177 ZNF230Q9UIE0 474 aaPredicted RBP5.52□□□□□ -1.53
USP48-208ENST00000479177 MAB21L2Q9Y586 359 aa5.52□□□□□ -1.53
USP48-208ENST00000479177 DOCK11Q5JSL3 2073 aa5.52□□□□□ -1.53
USP48-208ENST00000479177 FLNAP21333 2647 aaKnown RBP5.51□□□□□ -1.53
USP48-208ENST00000479177 ZANQ9Y493 2812 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 IGKV1D-8A0A087WSZ0 117 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 TMEM30CPA0ZSE6 113 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 ZNF736B4DX44 427 aaPredicted RBP5.51□□□□□ -1.53
USP48-208ENST00000479177 H7C1Q1 480 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 M0QYG6 137 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 MGST3O14880 152 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 ADAM20O43506 726 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 FCN3O75636 299 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 FSHBP01225 129 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 TK1P04183 234 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 CD3DP04234 171 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 AKAIN1P0CW23 69 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 PAX1P15863 534 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 HLA-DMAP28067 261 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 HRH1P35367 487 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 RFX2P48378 723 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 P2RX3P56373 397 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 TAS2R46P59540 309 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 KRTAP10-9P60411 292 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 HLA-DRB3P79483 266 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 GRK1Q15835 563 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 KCNJ8Q15842 424 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 SRSF7Q16629 238 aaKnown RBP eCLIP5.51□□□□□ -1.53
USP48-208ENST00000479177 TMEM155Q4W5P6 130 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 ACTBL2Q562R1 376 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 AVPI1Q5T686 147 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 HIST2H2BCQ6DN03 193 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 FAAP20Q6NZ36 180 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 STEAP1BQ6NZ63 245 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 MUC20Q8N307 709 aaPredicted RBP5.51□□□□□ -1.53
USP48-208ENST00000479177 ZNRF1Q8ND25 227 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 TMEM185AQ8NFB2 350 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 BEST4Q8NFU0 473 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 OR4D10Q8NGI6 311 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 PPP1R35Q8TAP8 253 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 NRGNQ92686 78 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 TIMD4Q96H15 378 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 TMEM246Q9BRR3 403 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 ST6GALNAC5Q9BVH7 336 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 TINAGL1Q9GZM7 467 aaPredicted RBP5.51□□□□□ -1.53
USP48-208ENST00000479177 FAM234AQ9H0X4 552 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 ZNF286AQ9HBT8 521 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 HRASLSQ9HDD0 168 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 Q9N2K0 584 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 KAAG1Q9UBP8 84 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 CTSZQ9UBR2 303 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 KIF25Q9UIL4 384 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 ANXA10Q9UJ72 324 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 EDARQ9UNE0 448 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 WNK2Q9Y3S1 2297 aa5.51□□□□□ -1.53
USP48-208ENST00000479177 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.51□□□□□ -1.532e-11■■■■■ 43
USP48-208ENST00000479177 MYO9AB2RTY4 2548 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 TLN2Q9Y4G6 2542 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 TRAV39A0A0B4J263 110 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 ODAMA1E959 279 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 NAP1L6A6NFF2 107 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 CEACAM18A8MTB9 384 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 F5H0A9 414 aaPredicted RBP5.5□□□□□ -1.53
USP48-208ENST00000479177 PPIHO43447 177 aaKnown RBP5.5□□□□□ -1.53
USP48-208ENST00000479177 NDUFA2O43678 99 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 RAB3DO95716 219 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 ZNF735P0CB33 412 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 SPNP16150 400 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 RCC1P18754 421 aaPredicted RBP5.5□□□□□ -1.53
USP48-208ENST00000479177 GIFP27352 417 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 ERP29P30040 261 aaKnown RBP5.5□□□□□ -1.53
USP48-208ENST00000479177 SLC6A1P30531 599 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 FAUP35544 74 aaKnown RBP5.5□□□□□ -1.53
USP48-208ENST00000479177 GPR6P46095 362 aaPredicted RBP5.5□□□□□ -1.53
USP48-208ENST00000479177 GLIPR1P48060 266 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 TMEM33P57088 247 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 AESQ08117 197 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 EDDM3AQ14507 147 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 MEF2DQ14814 521 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 OXA1LQ15070 435 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 HMGN3Q15651 99 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 CARTPTQ16568 116 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 PLA1AQ53H76 456 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 RNASE10Q5GAN6 216 aaKnown RBP5.5□□□□□ -1.53
USP48-208ENST00000479177 KRBOX4Q5JUW0 171 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 VAX1Q5SQQ9 334 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 MZT2BQ6NZ67 158 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 LYPD2Q6UXB3 125 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 GDPD3Q7L5L3 318 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 TCF23Q7RTU1 214 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms