RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 NMSQ5H8A3 153 aa9.18□□□□□ -0.94
VPS52-217ENST00000478934 NCMAPQ5T1S8 102 aa9.18□□□□□ -0.94
VPS52-217ENST00000478934 CXorf67Q86X51 503 aaPredicted RBP9.18□□□□□ -0.94
VPS52-217ENST00000478934 MDS2Q8NDY4 140 aa9.18□□□□□ -0.94
VPS52-217ENST00000478934 OR1K1Q8NGR3 316 aa9.18□□□□□ -0.94
VPS52-217ENST00000478934 WDYHV1Q96HA8 205 aa9.18□□□□□ -0.94
VPS52-217ENST00000478934 BCL2L14Q9BZR8 327 aa9.18□□□□□ -0.94
VPS52-217ENST00000478934 OR2J1Q9GZK6 312 aa9.18□□□□□ -0.94
VPS52-217ENST00000478934 RNF122Q9H9V4 155 aa9.18□□□□□ -0.94
VPS52-217ENST00000478934 TAAR3PQ9P1P4 343 aa9.18□□□□□ -0.94
VPS52-217ENST00000478934 ABI3Q9P2A4 366 aa9.18□□□□□ -0.94
VPS52-217ENST00000478934 PPP1R3CQ9UQK1 317 aa9.18□□□□□ -0.94
VPS52-217ENST00000478934 USF3Q68DE3 2245 aa9.18□□□□□ -0.94
VPS52-217ENST00000478934 KMT2EQ8IZD2 1858 aa9.18□□□□□ -0.94
VPS52-217ENST00000478934 RD3LP0DJH9 198 aa9.18□□□□□ -0.94
VPS52-217ENST00000478934 ZNF16P17020 682 aaPredicted RBP9.18□□□□□ -0.94
VPS52-217ENST00000478934 RAB5AP20339 215 aa9.18□□□□□ -0.94
VPS52-217ENST00000478934 IDH3GP51553 393 aaPredicted RBP9.18□□□□□ -0.94
VPS52-217ENST00000478934 RND3P61587 244 aa9.18□□□□□ -0.94
VPS52-217ENST00000478934 SOHLH1Q5JUK2 328 aa9.18□□□□□ -0.94
VPS52-217ENST00000478934 ZNF324BQ6AW86 544 aaPredicted RBP9.18□□□□□ -0.94
VPS52-217ENST00000478934 SPSB3Q6PJ21 355 aa9.18□□□□□ -0.94
VPS52-217ENST00000478934 BCL2L2Q92843 193 aaPredicted RBP9.18□□□□□ -0.94
VPS52-217ENST00000478934 C5orf52A6NGY3 159 aa9.17□□□□□ -0.94
VPS52-217ENST00000478934 C21orf140B9A014 251 aa9.17□□□□□ -0.94
VPS52-217ENST00000478934 CDIPTO14735 213 aa9.17□□□□□ -0.94
VPS52-217ENST00000478934 IAPPP10997 89 aa9.17□□□□□ -0.94
VPS52-217ENST00000478934 PAX9P55771 341 aa9.17□□□□□ -0.94
VPS52-217ENST00000478934 RPS23P62266 143 aaKnown RBP9.17□□□□□ -0.94
VPS52-217ENST00000478934 ZNF295-AS1Q8N0V1 137 aa9.17□□□□□ -0.94
VPS52-217ENST00000478934 OR51I2Q9H344 312 aa9.17□□□□□ -0.94
VPS52-217ENST00000478934 RBFOX3A6NFN3 312 aa9.17□□□□□ -0.94
VPS52-217ENST00000478934 M0R296 226 aa9.17□□□□□ -0.94
VPS52-217ENST00000478934 DEGS1O15121 323 aa9.17□□□□□ -0.94
VPS52-217ENST00000478934 IGLV2-14P01704 120 aa9.17□□□□□ -0.94
VPS52-217ENST00000478934 MT-ND4LP03901 98 aa9.17□□□□□ -0.94
VPS52-217ENST00000478934 GRPP07492 148 aa9.17□□□□□ -0.94
VPS52-217ENST00000478934 ZNF883P0CG24 379 aa9.17□□□□□ -0.94
VPS52-217ENST00000478934 COX5BP10606 129 aa9.17□□□□□ -0.94
VPS52-217ENST00000478934 UCP1P25874 307 aa9.17□□□□□ -0.94
VPS52-217ENST00000478934 PMELP40967 661 aa9.17□□□□□ -0.94
VPS52-217ENST00000478934 FBXW9Q5XUX1 488 aa9.17□□□□□ -0.94
VPS52-217ENST00000478934 SAXO1Q8IYX7 474 aa9.17□□□□□ -0.94
VPS52-217ENST00000478934 CYB561D1Q8N8Q1 229 aa9.17□□□□□ -0.94
VPS52-217ENST00000478934 GPR146Q96CH1 333 aa9.17□□□□□ -0.94
VPS52-217ENST00000478934 RSG1Q9BU20 258 aa9.17□□□□□ -0.94
VPS52-217ENST00000478934 PLEKHF2Q9H8W4 249 aa9.17□□□□□ -0.94
VPS52-217ENST00000478934 LYRM2Q9NU23 88 aaPredicted RBP9.17□□□□□ -0.94
VPS52-217ENST00000478934 ATPIF1Q9UII2 106 aa9.17□□□□□ -0.94
VPS52-217ENST00000478934 MAP1BP46821 2468 aaKnown RBP9.16□□□□□ -0.94
VPS52-217ENST00000478934 FAM90A10PA6NDY2 464 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 FAM90A18PA6NE21 464 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 FAM90A16PA6NEW6 464 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 FAM90A20PA6NIJ5 464 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 FAM90A8PA6NJQ4 464 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 FAM90A7PA6NKC0 464 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 FAM90A22PA8MWA6 464 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 FAM90A12PA8MX19 464 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 FAM90A5PA8MXJ8 464 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 FAM90A23PA8MXZ1 464 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 AGFG2O95081 481 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 IGKV1-39P01597 117 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 IGKV1D-39P04432 117 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 FAM90A15PP0C7V4 464 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 FAM90A13PP0C7W8 464 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 FAM90A14PP0C7W9 464 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 FAM90A24PP0C7X0 464 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 UCP2P55851 309 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 GNG3P63215 75 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 ARG2P78540 354 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 RNPS1Q15287 305 aaKnown RBP9.16□□□□□ -0.94
VPS52-217ENST00000478934 MPV17LQ2QL34 196 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 Q6P435 159 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 Q6ZS49 121 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 ZNF826PQ6ZT77 177 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 SCCPDHQ8NBX0 429 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 OR10J5Q8NHC4 309 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 RNASE11Q8TAA1 199 aaKnown RBP9.16□□□□□ -0.94
VPS52-217ENST00000478934 EGLN1Q9GZT9 426 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 VSIRQ9H7M9 311 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 FZR1Q9UM11 496 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 TRGV5A0A0B4J1U4 118 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 KIR2DS1A0A191URI9 304 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 LINC00587B1AMM8 73 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 KLRC4-KLRK1H3BQV0 150 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 NKX2-8O15522 239 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 OR2C1O95371 312 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 CNOT4O95628 575 aaKnown RBP9.16□□□□□ -0.94
VPS52-217ENST00000478934 F2RP25116 425 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 LMO1P25800 156 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 KIR2DS4P43632 304 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 FGF8P55075 233 aaPredicted RBP9.16□□□□□ -0.94
VPS52-217ENST00000478934 ID3Q02535 119 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 KIR2DS1Q14954 304 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 ZNF766Q5HY98 468 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 PLA2G2CQ5R387 149 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 ZNF573Q86YE8 665 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 THNSL2Q86YJ6 484 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 PBDC1Q9BVG4 233 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 GP6Q9HCN6 339 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms