RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP21.77■■□□□ 1.081e-6■■■■□ 24.6
CCM2-211ENST00000478582 SERPINE3A8MV23 424 aa21.76■■□□□ 1.07
CCM2-211ENST00000478582 SPINT2O43291 252 aa21.76■■□□□ 1.07
CCM2-211ENST00000478582 RORCP51449 518 aa21.76■■□□□ 1.07
CCM2-211ENST00000478582 TMEM30BQ3MIR4 351 aa21.76■■□□□ 1.07
CCM2-211ENST00000478582 NDNFQ8TB73 568 aa21.76■■□□□ 1.07
CCM2-211ENST00000478582 AJUBAQ96IF1 538 aa21.76■■□□□ 1.07
CCM2-211ENST00000478582 ESM1Q9NQ30 184 aa21.76■■□□□ 1.07
CCM2-211ENST00000478582 KCNIP1Q9NZI2 227 aa21.76■■□□□ 1.07
CCM2-211ENST00000478582 TBL2Q9Y4P3 447 aaKnown RBP21.76■■□□□ 1.07
CCM2-211ENST00000478582 ARG1P05089 322 aa21.75■■□□□ 1.07
CCM2-211ENST00000478582 LGALS4P56470 323 aa21.75■■□□□ 1.07
CCM2-211ENST00000478582 OLFML2AQ68BL7 652 aa21.75■■□□□ 1.07
CCM2-211ENST00000478582 Q6YL49 198 aa21.75■■□□□ 1.07
CCM2-211ENST00000478582 MOB1BQ7L9L4 216 aa21.75■■□□□ 1.07
CCM2-211ENST00000478582 CMSS1Q9BQ75 279 aaKnown RBP21.75■■□□□ 1.07
CCM2-211ENST00000478582 ABCG5Q9H222 651 aa21.75■■□□□ 1.07
CCM2-211ENST00000478582 TAF9BQ9HBM6 251 aa21.75■■□□□ 1.07
CCM2-211ENST00000478582 ZNF286AQ9HBT8 521 aa21.75■■□□□ 1.07
CCM2-211ENST00000478582 C12orf4Q9NQ89 552 aa21.75■■□□□ 1.07
CCM2-211ENST00000478582 FAM96BQ9Y3D0 163 aa21.75■■□□□ 1.07
CCM2-211ENST00000478582 A0A0A6YYH2 397 aa21.74■■□□□ 1.07
CCM2-211ENST00000478582 MDFIC2A0A1B0GVS7 189 aa21.74■■□□□ 1.07
CCM2-211ENST00000478582 A6NJ64 397 aa21.74■■□□□ 1.07
CCM2-211ENST00000478582 FBP1P09467 338 aa21.74■■□□□ 1.07
CCM2-211ENST00000478582 GNB3P16520 340 aa21.74■■□□□ 1.07
CCM2-211ENST00000478582 NFYBP25208 207 aa21.74■■□□□ 1.07
CCM2-211ENST00000478582 Q6ZPA2 131 aa21.74■■□□□ 1.07
CCM2-211ENST00000478582 LDLRAD3Q86YD5 345 aa21.74■■□□□ 1.07
CCM2-211ENST00000478582 ACOT12Q8WYK0 555 aa21.74■■□□□ 1.07
CCM2-211ENST00000478582 CHMP1AQ9HD42 196 aaPredicted RBP21.74■■□□□ 1.07
CCM2-211ENST00000478582 MGAT4AQ9UM21 535 aa21.74■■□□□ 1.07
CCM2-211ENST00000478582 IGLV1-47P01700 117 aa21.73■■□□□ 1.07
CCM2-211ENST00000478582 HBZP02008 142 aa21.73■■□□□ 1.07
CCM2-211ENST00000478582 LOXL3P58215 753 aa21.73■■□□□ 1.07
CCM2-211ENST00000478582 SPCS2Q15005 226 aa21.73■■□□□ 1.07
CCM2-211ENST00000478582 HMGN3Q15651 99 aa21.73■■□□□ 1.07
CCM2-211ENST00000478582 MINOS1Q5TGZ0 78 aa21.73■■□□□ 1.07
CCM2-211ENST00000478582 BEND2Q8NDZ0 799 aa21.73■■□□□ 1.07
CCM2-211ENST00000478582 OR9G1Q8NH87 305 aa21.73■■□□□ 1.07
CCM2-211ENST00000478582 ZNF596Q8TC21 504 aa21.73■■□□□ 1.07
CCM2-211ENST00000478582 ZDHHC16Q969W1 377 aa21.73■■□□□ 1.07
CCM2-211ENST00000478582 HDHD3Q9BSH5 251 aaPredicted RBP21.73■■□□□ 1.07
CCM2-211ENST00000478582 MINOS1-NBL1R4GNA1 71 aa21.73■■□□□ 1.07
CCM2-211ENST00000478582 CD3GP09693 182 aa21.72■■□□□ 1.07
CCM2-211ENST00000478582 PRRX1P54821 245 aa21.72■■□□□ 1.07
CCM2-211ENST00000478582 UBA52P62987 128 aaKnown RBP21.72■■□□□ 1.07
CCM2-211ENST00000478582 Q3ZCU0 254 aa21.72■■□□□ 1.07
CCM2-211ENST00000478582 CDNFQ49AH0 187 aa21.72■■□□□ 1.07
CCM2-211ENST00000478582 UTF1Q5T230 341 aa21.72■■□□□ 1.07
CCM2-211ENST00000478582 OR4P4Q8NGL7 312 aa21.72■■□□□ 1.07
CCM2-211ENST00000478582 OR1L1Q8NH94 360 aa21.72■■□□□ 1.07
CCM2-211ENST00000478582 CMTM3Q96MX0 182 aa21.72■■□□□ 1.07
CCM2-211ENST00000478582 MEGF9Q9H1U4 602 aa21.72■■□□□ 1.07
CCM2-211ENST00000478582 GFOD1Q9NXC2 390 aa21.72■■□□□ 1.07
CCM2-211ENST00000478582 CEPT1Q9Y6K0 416 aa21.72■■□□□ 1.07
CCM2-211ENST00000478582 SDCBPO00560 298 aaPredicted RBP21.71■■□□□ 1.07
CCM2-211ENST00000478582 GSTP1P09211 210 aaKnown RBP21.71■■□□□ 1.07
CCM2-211ENST00000478582 ZNF182P17025 639 aaPredicted RBP21.71■■□□□ 1.07
CCM2-211ENST00000478582 ACTG1P63261 375 aa21.71■■□□□ 1.07
CCM2-211ENST00000478582 MRPS15P82914 257 aaKnown RBP21.71■■□□□ 1.07
CCM2-211ENST00000478582 BAMBIQ13145 260 aa21.71■■□□□ 1.07
CCM2-211ENST00000478582 LTC4SQ16873 150 aa21.71■■□□□ 1.07
CCM2-211ENST00000478582 ZNF260Q3ZCT1 412 aa21.71■■□□□ 1.07
CCM2-211ENST00000478582 UBE2NLQ5JXB2 153 aa21.71■■□□□ 1.07
CCM2-211ENST00000478582 LHFPL4Q7Z7J7 247 aa21.71■■□□□ 1.07
CCM2-211ENST00000478582 UBALD1Q8TB05 177 aa21.71■■□□□ 1.07
CCM2-211ENST00000478582 C17orf50Q8WW18 174 aa21.71■■□□□ 1.07
CCM2-211ENST00000478582 PHF21AQ96BD5 680 aa21.71■■□□□ 1.07
CCM2-211ENST00000478582 ISOC1Q96CN7 298 aa21.71■■□□□ 1.07
CCM2-211ENST00000478582 MALSU1Q96EH3 234 aa21.71■■□□□ 1.07
CCM2-211ENST00000478582 ZMAT3Q9HA38 289 aaKnown RBP21.71■■□□□ 1.07
CCM2-211ENST00000478582 Q9N2K0 584 aa21.71■■□□□ 1.07
CCM2-211ENST00000478582 DIABLOQ9NR28 239 aa21.71■■□□□ 1.07
CCM2-211ENST00000478582 ZNRD1Q9P1U0 126 aa21.71■■□□□ 1.07
CCM2-211ENST00000478582 A0A075B6Q4 140 aa21.7■■□□□ 1.06
CCM2-211ENST00000478582 TMEM89A2RUT3 159 aa21.7■■□□□ 1.06
CCM2-211ENST00000478582 FAM172BPA6NC97 362 aa21.7■■□□□ 1.06
CCM2-211ENST00000478582 CLDN34H7C241 214 aa21.7■■□□□ 1.06
CCM2-211ENST00000478582 TOR1AO14656 332 aa21.7■■□□□ 1.06
CCM2-211ENST00000478582 NOL3O60936 208 aaKnown RBP21.7■■□□□ 1.06
CCM2-211ENST00000478582 MELTFP08582 738 aa21.7■■□□□ 1.06
CCM2-211ENST00000478582 HTD2P86397 168 aa21.7■■□□□ 1.06
CCM2-211ENST00000478582 HLA-DRB5Q30154 266 aa21.7■■□□□ 1.06
CCM2-211ENST00000478582 LDLRAD2Q5SZI1 272 aa21.7■■□□□ 1.06
CCM2-211ENST00000478582 C12orf54Q6X4T0 127 aa21.7■■□□□ 1.06
CCM2-211ENST00000478582 SAMD12Q8N8I0 201 aa21.7■■□□□ 1.06
CCM2-211ENST00000478582 C8orf31Q8N9H6 132 aa21.7■■□□□ 1.06
CCM2-211ENST00000478582 AP3S1Q92572 193 aa21.7■■□□□ 1.06
CCM2-211ENST00000478582 PSG11Q9UQ72 335 aa21.7■■□□□ 1.06
CCM2-211ENST00000478582 J3QR06 171 aa21.69■■□□□ 1.06
CCM2-211ENST00000478582 HTR1DP28221 377 aa21.69■■□□□ 1.06
CCM2-211ENST00000478582 HACD4Q5VWC8 232 aa21.69■■□□□ 1.06
CCM2-211ENST00000478582 PRR18Q8N4B5 295 aa21.69■■□□□ 1.06
CCM2-211ENST00000478582 TMEM86BQ8N661 226 aa21.69■■□□□ 1.06
CCM2-211ENST00000478582 SETD6Q8TBK2 473 aa21.69■■□□□ 1.06
CCM2-211ENST00000478582 GCDHQ92947 438 aaPredicted RBP21.69■■□□□ 1.06
CCM2-211ENST00000478582 CREB3L1Q96BA8 519 aa21.69■■□□□ 1.06
CCM2-211ENST00000478582 GALMQ96C23 342 aa21.69■■□□□ 1.06
CCM2-211ENST00000478582 S100A16Q96FQ6 103 aaKnown RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms