RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 FBN2P35556 2912 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 F8P00451 2351 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 LRBAP50851 2863 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 TRBV6-6A0A0A6YYG2 114 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 ZNF816-ZNF321PA0A0X1KG74 233 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 WRBO00258 174 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 UPK1AO00322 258 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 FADS1O60427 444 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 ICOSLGO75144 302 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 REM1O75628 298 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 TNFAIP8O95379 198 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 EPPINO95925 133 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 SERPINA5P05154 406 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 GUSBP08236 651 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 ANXA8P13928 327 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 ZNF708P17019 499 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 PRPS1L1P21108 318 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 STOMP27105 288 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 OPRM1P35372 400 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 RFC3P40938 356 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 CXCL5P42830 114 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 CDKN1BP46527 198 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 RPL5P46777 297 aaKnown RBP2.58□□□□□ -2
CDC42BPA-212ENST00000478573 MRPL19P49406 292 aaKnown RBP2.58□□□□□ -2
CDC42BPA-212ENST00000478573 CLDN8P56748 225 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 NUTF2P61970 127 aaKnown RBP2.58□□□□□ -2
CDC42BPA-212ENST00000478573 PAX5Q02548 391 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 LIPEQ05469 1076 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 SELENBP1Q13228 472 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 MED21Q13503 144 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 PON3Q15166 354 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 NNATQ16517 81 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 BCL2A1Q16548 175 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 TRMT12Q53H54 448 aaKnown RBP2.58□□□□□ -2
CDC42BPA-212ENST00000478573 ANXA8L1Q5VT79 327 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 DHRS4L2Q6PKH6 230 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 ZCCHC23Q6ZST2 131 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 SSX9Q7RTT3 188 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 PLCZ1Q86YW0 608 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 RIMKLAQ8IXN7 391 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 COX18Q8N8Q8 333 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 OR2M3Q8NG83 312 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 OR4K17Q8NGC6 315 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 OR8J2Q8NGG1 315 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 LILRB4Q8NHJ6 448 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 ZNF502Q8TBZ5 544 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 CA5BP1Q8WTZ4 195 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 SRSF12Q8WXF0 261 aaKnown RBP2.58□□□□□ -2
CDC42BPA-212ENST00000478573 OR5P2Q8WZ92 322 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 RNASE6Q93091 150 aaKnown RBP2.58□□□□□ -2
CDC42BPA-212ENST00000478573 TMBIM1Q969X1 311 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 TESCQ96BS2 214 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 SLC35G5Q96KT7 338 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 WFIKKN1Q96NZ8 548 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 SDHCQ99643 169 aaPredicted RBP2.58□□□□□ -2
CDC42BPA-212ENST00000478573 MRPS26Q9BYN8 205 aaKnown RBP2.58□□□□□ -2
CDC42BPA-212ENST00000478573 KCNJ16Q9NPI9 418 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 PAQR5Q9NXK6 330 aaPredicted RBP2.58□□□□□ -2
CDC42BPA-212ENST00000478573 SLC17A7Q9P2U7 560 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 RABL2AQ9UBK7 228 aaPredicted RBP2.58□□□□□ -2
CDC42BPA-212ENST00000478573 ZNF629Q9UEG4 869 aaPredicted RBP2.58□□□□□ -2
CDC42BPA-212ENST00000478573 AKAP6Q13023 2319 aa2.58□□□□□ -2
CDC42BPA-212ENST00000478573 CADP27708 2225 aa2.57□□□□□ -2
CDC42BPA-212ENST00000478573 TRPC5OSA6NMA1 111 aa2.57□□□□□ -2
CDC42BPA-212ENST00000478573 F6UB75 175 aa2.57□□□□□ -2
CDC42BPA-212ENST00000478573 C19orf84I3L1E1 186 aa2.57□□□□□ -2
CDC42BPA-212ENST00000478573 EIF4E2O60573 245 aaKnown RBP2.57□□□□□ -2
CDC42BPA-212ENST00000478573 SPAG7O75391 227 aa2.57□□□□□ -2
CDC42BPA-212ENST00000478573 CA11O75493 328 aa2.57□□□□□ -2
CDC42BPA-212ENST00000478573 KCNK2O95069 426 aa2.57□□□□□ -2
CDC42BPA-212ENST00000478573 RCBTB2O95199 551 aa2.57□□□□□ -2
CDC42BPA-212ENST00000478573 ZNF250P15622 560 aa2.57□□□□□ -2
CDC42BPA-212ENST00000478573 GPX4P36969 197 aaPredicted RBP2.57□□□□□ -2
CDC42BPA-212ENST00000478573 ZNF136P52737 540 aa2.57□□□□□ -2
CDC42BPA-212ENST00000478573 CLDN18P56856 261 aa2.57□□□□□ -2
CDC42BPA-212ENST00000478573 EMX2Q04743 252 aa2.57□□□□□ -2
CDC42BPA-212ENST00000478573 IL18Q14116 193 aa2.57□□□□□ -2
CDC42BPA-212ENST00000478573 GUSBP1Q15486 140 aa2.57□□□□□ -2
CDC42BPA-212ENST00000478573 RSPO1Q2MKA7 263 aaPredicted RBP2.57□□□□□ -2
CDC42BPA-212ENST00000478573 PLPPR5Q32ZL2 321 aa2.57□□□□□ -2
CDC42BPA-212ENST00000478573 OGFRL1Q5TC84 451 aaPredicted RBP2.57□□□□□ -2
CDC42BPA-212ENST00000478573 TEX43Q6ZNM6 134 aa2.57□□□□□ -2
CDC42BPA-212ENST00000478573 NCCRP1Q6ZVX7 275 aaPredicted RBP2.57□□□□□ -2
CDC42BPA-212ENST00000478573 EIF3MQ7L2H7 374 aaKnown RBP2.57□□□□□ -2
CDC42BPA-212ENST00000478573 GABRG1Q8N1C3 465 aa2.57□□□□□ -2
CDC42BPA-212ENST00000478573 RPRMLQ8N4K4 120 aa2.57□□□□□ -2
CDC42BPA-212ENST00000478573 PACRGLQ8N7B6 248 aa2.57□□□□□ -2
CDC42BPA-212ENST00000478573 ARIH2OSQ8N7S6 290 aa2.57□□□□□ -2
CDC42BPA-212ENST00000478573 OR4S2Q8NH73 311 aa2.57□□□□□ -2
CDC42BPA-212ENST00000478573 ZNF420Q8TAQ5 688 aaPredicted RBP2.57□□□□□ -2
CDC42BPA-212ENST00000478573 TMEM158Q8WZ71 300 aa2.57□□□□□ -2
CDC42BPA-212ENST00000478573 CIDECQ96AQ7 238 aaPredicted RBP2.57□□□□□ -2
CDC42BPA-212ENST00000478573 RMND5BQ96G75 393 aaPredicted RBP2.57□□□□□ -2
CDC42BPA-212ENST00000478573 JSRP1Q96MG2 331 aaPredicted RBP2.57□□□□□ -2
CDC42BPA-212ENST00000478573 BCL7BQ9BQE9 202 aa2.57□□□□□ -2
CDC42BPA-212ENST00000478573 C1orf50Q9BV19 199 aa2.57□□□□□ -2
CDC42BPA-212ENST00000478573 SLC25A39Q9BZJ4 359 aaPredicted RBP2.57□□□□□ -2
CDC42BPA-212ENST00000478573 TBL1XR1Q9BZK7 514 aa2.57□□□□□ -2
CDC42BPA-212ENST00000478573 YIPF3Q9GZM5 350 aa2.57□□□□□ -2
CDC42BPA-212ENST00000478573 PIGUQ9H490 435 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms