RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 OR51I2Q9H344 312 aa12.6□□□□□ -0.39
HDAC6-220ENST00000477528 ZNF106Q9H2Y7 1883 aaKnown RBP12.6□□□□□ -0.39
HDAC6-220ENST00000477528 TAS2R45P59539 299 aa12.6□□□□□ -0.39
HDAC6-220ENST00000477528 RPS16P62249 146 aaKnown RBP12.6□□□□□ -0.39
HDAC6-220ENST00000477528 TMEM187Q14656 261 aa12.6□□□□□ -0.39
HDAC6-220ENST00000477528 ABLIM2Q6H8Q1 611 aa12.6□□□□□ -0.39
HDAC6-220ENST00000477528 TMEM108Q6UXF1 575 aa12.6□□□□□ -0.39
HDAC6-220ENST00000477528 CACNA1EQ15878 2313 aa12.6□□□□□ -0.39
HDAC6-220ENST00000477528 LDLRAD4O15165 306 aa12.6□□□□□ -0.39
HDAC6-220ENST00000477528 RAB13P51153 203 aa12.6□□□□□ -0.39
HDAC6-220ENST00000477528 BTNL3Q6UXE8 466 aa12.6□□□□□ -0.39
HDAC6-220ENST00000477528 C1orf174Q8IYL3 243 aa12.6□□□□□ -0.39
HDAC6-220ENST00000477528 OR13D1Q8NGV5 346 aa12.6□□□□□ -0.39
HDAC6-220ENST00000477528 ZNF705GA8MUZ8 300 aaPredicted RBP12.6□□□□□ -0.39
HDAC6-220ENST00000477528 RTBDNQ9BSG5 229 aaPredicted RBP12.6□□□□□ -0.39
HDAC6-220ENST00000477528 NIT2Q9NQR4 276 aa12.6□□□□□ -0.39
HDAC6-220ENST00000477528 IL36GQ9NZH8 169 aa12.6□□□□□ -0.39
HDAC6-220ENST00000477528 LIPGQ9Y5X9 500 aa12.6□□□□□ -0.39
HDAC6-220ENST00000477528 ZNF705FA8MVS1 300 aaPredicted RBP12.59□□□□□ -0.39
HDAC6-220ENST00000477528 ZNF705DP0CH99 300 aaPredicted RBP12.59□□□□□ -0.39
HDAC6-220ENST00000477528 ZNF705BP0CI00 300 aaPredicted RBP12.59□□□□□ -0.39
HDAC6-220ENST00000477528 HOXB1P14653 301 aaPredicted RBP12.59□□□□□ -0.39
HDAC6-220ENST00000477528 MUC1P15941 1255 aaPredicted RBP12.59□□□□□ -0.39
HDAC6-220ENST00000477528 LY6G6FQ5SQ64 297 aa12.59□□□□□ -0.39
HDAC6-220ENST00000477528 LYG1Q8N1E2 194 aa12.59□□□□□ -0.39
HDAC6-220ENST00000477528 TMEM252Q8N6L7 170 aa12.59□□□□□ -0.39
HDAC6-220ENST00000477528 POM121L2Q96KW2 1035 aa12.59□□□□□ -0.39
HDAC6-220ENST00000477528 LYZL4Q96KX0 146 aa12.59□□□□□ -0.39
HDAC6-220ENST00000477528 C3orf80F5H4A9 247 aa12.59□□□□□ -0.39
HDAC6-220ENST00000477528 NKX2-8O15522 239 aa12.59□□□□□ -0.39
HDAC6-220ENST00000477528 CELA3AP09093 270 aa12.59□□□□□ -0.39
HDAC6-220ENST00000477528 FAM89BQ8N5H3 189 aa12.59□□□□□ -0.39
HDAC6-220ENST00000477528 FAM24BQ8N5W8 94 aa12.59□□□□□ -0.39
HDAC6-220ENST00000477528 C1QTNF5Q9BXJ0 243 aa12.59□□□□□ -0.39
HDAC6-220ENST00000477528 MSL2Q9HCI7 577 aa12.59□□□□□ -0.39
HDAC6-220ENST00000477528 DLL3Q9NYJ7 618 aa12.59□□□□□ -0.39
HDAC6-220ENST00000477528 GOLGB1Q14789 3259 aaKnown RBP12.59□□□□□ -0.39
HDAC6-220ENST00000477528 OR2H2O95918 312 aa12.59□□□□□ -0.39
HDAC6-220ENST00000477528 ZNF273Q14593 569 aa12.59□□□□□ -0.39
HDAC6-220ENST00000477528 C12orf57Q99622 126 aa12.59□□□□□ -0.39
HDAC6-220ENST00000477528 FANCMQ8IYD8 2048 aa12.59□□□□□ -0.39
HDAC6-220ENST00000477528 FTH1P19P0C7X4 201 aa12.59□□□□□ -0.39
HDAC6-220ENST00000477528 RCC2Q9P258 522 aaKnown RBP12.59□□□□□ -0.39
HDAC6-220ENST00000477528 ST8SIA5O15466 376 aa12.58□□□□□ -0.4
HDAC6-220ENST00000477528 ADH4P08319 380 aa12.58□□□□□ -0.4
HDAC6-220ENST00000477528 ZNF708P17019 499 aa12.58□□□□□ -0.4
HDAC6-220ENST00000477528 HLA-GP17693 338 aa12.58□□□□□ -0.4
HDAC6-220ENST00000477528 H3F3AP84243 136 aa12.58□□□□□ -0.4
HDAC6-220ENST00000477528 AESQ08117 197 aa12.58□□□□□ -0.4
HDAC6-220ENST00000477528 TGIF1Q15583 401 aa12.58□□□□□ -0.4
HDAC6-220ENST00000477528 NECAP1Q8NC96 275 aa12.58□□□□□ -0.4
HDAC6-220ENST00000477528 R3HDM4Q96D70 268 aa12.58□□□□□ -0.4
HDAC6-220ENST00000477528 SAMD10Q9BYL1 202 aa12.58□□□□□ -0.4
HDAC6-220ENST00000477528 RNF222A6NCQ9 220 aa12.58□□□□□ -0.4
HDAC6-220ENST00000477528 ETV3LQ6ZN32 361 aa12.58□□□□□ -0.4
HDAC6-220ENST00000477528 DTD1Q8TEA8 209 aa12.58□□□□□ -0.4
HDAC6-220ENST00000477528 DAZAP1Q96EP5 407 aaKnown RBP12.58□□□□□ -0.4
HDAC6-220ENST00000477528 HSD17B10Q99714 261 aaKnown RBP12.58□□□□□ -0.4
HDAC6-220ENST00000477528 TUBG2Q9NRH3 451 aa12.58□□□□□ -0.4
HDAC6-220ENST00000477528 C7orf77A4D0Y5 90 aa12.58□□□□□ -0.4
HDAC6-220ENST00000477528 PRR33A8MZF0 331 aa12.58□□□□□ -0.4
HDAC6-220ENST00000477528 J3QW42 95 aa12.58□□□□□ -0.4
HDAC6-220ENST00000477528 NDUFB3O43676 98 aa12.58□□□□□ -0.4
HDAC6-220ENST00000477528 P2RY6Q15077 328 aa12.58□□□□□ -0.4
HDAC6-220ENST00000477528 ZNF737O75373 536 aa12.58□□□□□ -0.4
HDAC6-220ENST00000477528 PGLYRP1O75594 196 aaPredicted RBP12.58□□□□□ -0.4
HDAC6-220ENST00000477528 NAT1P18440 290 aa12.58□□□□□ -0.4
HDAC6-220ENST00000477528 GUCA2BQ16661 112 aa12.58□□□□□ -0.4
HDAC6-220ENST00000477528 OR10G4Q8NGN3 311 aa12.58□□□□□ -0.4
HDAC6-220ENST00000477528 OR10G9Q8NGN4 311 aa12.58□□□□□ -0.4
HDAC6-220ENST00000477528 OR10G7Q8NGN6 311 aa12.58□□□□□ -0.4
HDAC6-220ENST00000477528 GP6Q9HCN6 339 aa12.58□□□□□ -0.4
HDAC6-220ENST00000477528 TRGV8A0A0C4DH27 118 aa12.57□□□□□ -0.4
HDAC6-220ENST00000477528 CLDN34H7C241 214 aa12.57□□□□□ -0.4
HDAC6-220ENST00000477528 LRRC10Q5BKY1 277 aa12.57□□□□□ -0.4
HDAC6-220ENST00000477528 TIPARPQ7Z3E1 657 aaKnown RBP12.57□□□□□ -0.4
HDAC6-220ENST00000477528 SMDT1Q9H4I9 107 aa12.57□□□□□ -0.4
HDAC6-220ENST00000477528 OBSL1O75147 1896 aa12.57□□□□□ -0.4
HDAC6-220ENST00000477528 OR5H1A6NKK0 313 aa12.57□□□□□ -0.4
HDAC6-220ENST00000477528 STPG1Q5TH74 334 aa12.57□□□□□ -0.4
HDAC6-220ENST00000477528 MOGAT3Q86VF5 341 aa12.57□□□□□ -0.4
HDAC6-220ENST00000477528 SELENOHQ8IZQ5 122 aaKnown RBP12.57□□□□□ -0.4
HDAC6-220ENST00000477528 PUSL1Q8N0Z8 303 aaKnown RBP12.57□□□□□ -0.4
HDAC6-220ENST00000477528 OR52M1Q8NGK5 317 aa12.57□□□□□ -0.4
HDAC6-220ENST00000477528 OR4S2Q8NH73 311 aa12.57□□□□□ -0.4
HDAC6-220ENST00000477528 OR5P3Q8WZ94 311 aa12.57□□□□□ -0.4
HDAC6-220ENST00000477528 TIMD4Q96H15 378 aa12.57□□□□□ -0.4
HDAC6-220ENST00000477528 ADTRPQ96IZ2 230 aa12.57□□□□□ -0.4
HDAC6-220ENST00000477528 SNRNP200O75643 2136 aaKnown RBP12.57□□□□□ -0.4
HDAC6-220ENST00000477528 hADV38S2A0JD32 116 aa12.57□□□□□ -0.4
HDAC6-220ENST00000477528 ZNF716A6NP11 495 aa12.57□□□□□ -0.4
HDAC6-220ENST00000477528 CT45A6P0DMU7 189 aa12.57□□□□□ -0.4
HDAC6-220ENST00000477528 CT45A5P0DMU8 189 aa12.57□□□□□ -0.4
HDAC6-220ENST00000477528 CT45A7P0DMV0 189 aa12.57□□□□□ -0.4
HDAC6-220ENST00000477528 UBE2G2P60604 165 aa12.57□□□□□ -0.4
HDAC6-220ENST00000477528 CT45A1Q5HYN5 189 aa12.57□□□□□ -0.4
HDAC6-220ENST00000477528 DPPA3Q6W0C5 159 aa12.57□□□□□ -0.4
HDAC6-220ENST00000477528 CT45A3Q8NHU0 189 aa12.57□□□□□ -0.4
HDAC6-220ENST00000477528 GALNT14Q96FL9 552 aa12.57□□□□□ -0.4
HDAC6-220ENST00000477528 FOXD3Q9UJU5 478 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms