RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 BANF2Q9H503 90 aa8.56□□□□□ -1.04
SEC13-214ENST00000476597 ETAA1Q9NY74 926 aa8.56□□□□□ -1.04
SEC13-214ENST00000476597 PEX16Q9Y5Y5 336 aa8.56□□□□□ -1.04
SEC13-214ENST00000476597 IGHV3-43A0A0B4J1X8 118 aa8.55□□□□□ -1.04
SEC13-214ENST00000476597 C12orf77C9JDV5 145 aa8.55□□□□□ -1.04
SEC13-214ENST00000476597 ANKRD65E5RJM6 399 aa8.55□□□□□ -1.04
SEC13-214ENST00000476597 SPINT2O43291 252 aa8.55□□□□□ -1.04
SEC13-214ENST00000476597 CA11O75493 328 aa8.55□□□□□ -1.04
SEC13-214ENST00000476597 SC5DO75845 299 aa8.55□□□□□ -1.04
SEC13-214ENST00000476597 PRB2P02812 416 aaPredicted RBP8.55□□□□□ -1.04
SEC13-214ENST00000476597 CDK1P06493 297 aa8.55□□□□□ -1.04
SEC13-214ENST00000476597 IGHV3-43DP0DP04 118 aa8.55□□□□□ -1.04
SEC13-214ENST00000476597 MGMTP16455 207 aa8.55□□□□□ -1.04
SEC13-214ENST00000476597 FUT3P21217 361 aa8.55□□□□□ -1.04
SEC13-214ENST00000476597 MAPK3P27361 379 aaPredicted RBP8.55□□□□□ -1.04
SEC13-214ENST00000476597 VHLP40337 213 aa8.55□□□□□ -1.04
SEC13-214ENST00000476597 ZNF134P52741 427 aa8.55□□□□□ -1.04
SEC13-214ENST00000476597 ACSM3Q53FZ2 586 aa8.55□□□□□ -1.04
SEC13-214ENST00000476597 C6orf141Q5SZD1 244 aa8.55□□□□□ -1.04
SEC13-214ENST00000476597 STEAP3Q658P3 488 aa8.55□□□□□ -1.04
SEC13-214ENST00000476597 SIGIRRQ6IA17 410 aa8.55□□□□□ -1.04
SEC13-214ENST00000476597 REC114Q7Z4M0 266 aa8.55□□□□□ -1.04
SEC13-214ENST00000476597 MS4A15Q8N5U1 240 aa8.55□□□□□ -1.04
SEC13-214ENST00000476597 NKAIN3Q8N8D7 197 aa8.55□□□□□ -1.04
SEC13-214ENST00000476597 ZNF439Q8NDP4 499 aa8.55□□□□□ -1.04
SEC13-214ENST00000476597 OR4K15Q8NH41 348 aa8.55□□□□□ -1.04
SEC13-214ENST00000476597 EAF1Q96JC9 268 aaPredicted RBP8.55□□□□□ -1.04
SEC13-214ENST00000476597 Q96M66 194 aa8.55□□□□□ -1.04
SEC13-214ENST00000476597 SELENOIQ9C0D9 397 aa8.55□□□□□ -1.04
SEC13-214ENST00000476597 DCLRE1BQ9H816 532 aa8.55□□□□□ -1.04
SEC13-214ENST00000476597 GHRLQ9UBU3 117 aa8.55□□□□□ -1.04
SEC13-214ENST00000476597 TRAPPC2LQ9UL33 140 aa8.55□□□□□ -1.04
SEC13-214ENST00000476597 PSMB11A5LHX3 300 aa8.54□□□□□ -1.04
SEC13-214ENST00000476597 PTGES3LE9PB15 166 aa8.54□□□□□ -1.04
SEC13-214ENST00000476597 H0YHG0 523 aa8.54□□□□□ -1.04
SEC13-214ENST00000476597 CRTAPO75718 401 aaPredicted RBP8.54□□□□□ -1.04
SEC13-214ENST00000476597 IGHG2P01859 326 aa8.54□□□□□ -1.04
SEC13-214ENST00000476597 HBZP02008 142 aa8.54□□□□□ -1.04
SEC13-214ENST00000476597 PF4V1P10720 104 aa8.54□□□□□ -1.04
SEC13-214ENST00000476597 CD37P11049 281 aa8.54□□□□□ -1.04
SEC13-214ENST00000476597 RCC1P18754 421 aaPredicted RBP8.54□□□□□ -1.04
SEC13-214ENST00000476597 CD33P20138 364 aa8.54□□□□□ -1.04
SEC13-214ENST00000476597 CD1BP29016 333 aa8.54□□□□□ -1.04
SEC13-214ENST00000476597 REG1BP48304 166 aa8.54□□□□□ -1.04
SEC13-214ENST00000476597 INSL4Q14641 139 aa8.54□□□□□ -1.04
SEC13-214ENST00000476597 TMEM30BQ3MIR4 351 aa8.54□□□□□ -1.04
SEC13-214ENST00000476597 CT45A1Q5HYN5 189 aa8.54□□□□□ -1.04
SEC13-214ENST00000476597 C6orf183Q5T699 404 aa8.54□□□□□ -1.04
SEC13-214ENST00000476597 SLC25A48Q6ZT89 311 aaKnown RBP8.54□□□□□ -1.04
SEC13-214ENST00000476597 ZNF329Q86UD4 541 aa8.54□□□□□ -1.04
SEC13-214ENST00000476597 IZUMO1Q8IYV9 350 aa8.54□□□□□ -1.04
SEC13-214ENST00000476597 Q8N6K4 173 aa8.54□□□□□ -1.04
SEC13-214ENST00000476597 OR1L1Q8NH94 360 aa8.54□□□□□ -1.04
SEC13-214ENST00000476597 CT45A3Q8NHU0 189 aa8.54□□□□□ -1.04
SEC13-214ENST00000476597 CHPT1Q8WUD6 406 aa8.54□□□□□ -1.04
SEC13-214ENST00000476597 RTN4IP1Q8WWV3 396 aaPredicted RBP8.54□□□□□ -1.04
SEC13-214ENST00000476597 SGCDQ92629 289 aa8.54□□□□□ -1.04
SEC13-214ENST00000476597 PHF21AQ96BD5 680 aa8.54□□□□□ -1.04
SEC13-214ENST00000476597 CYYR1Q96J86 154 aa8.54□□□□□ -1.04
SEC13-214ENST00000476597 MND1Q9BWT6 205 aa8.54□□□□□ -1.04
SEC13-214ENST00000476597 VCXQ9H320 206 aa8.54□□□□□ -1.04
SEC13-214ENST00000476597 RAB9BQ9NP90 201 aa8.54□□□□□ -1.04
SEC13-214ENST00000476597 NECAP2Q9NVZ3 263 aa8.54□□□□□ -1.04
SEC13-214ENST00000476597 NKX1-2Q9UD57 310 aaPredicted RBP8.54□□□□□ -1.04
SEC13-214ENST00000476597 PLXNB1O43157 2135 aa8.53□□□□□ -1.04
SEC13-214ENST00000476597 IGHV3-72A0A0B4J1Y9 119 aa8.53□□□□□ -1.04
SEC13-214ENST00000476597 UBE2QL1A1L167 161 aa8.53□□□□□ -1.04
SEC13-214ENST00000476597 LINC01548A6NM66 108 aa8.53□□□□□ -1.04
SEC13-214ENST00000476597 SERPINE3A8MV23 424 aa8.53□□□□□ -1.04
SEC13-214ENST00000476597 ZNF736B4DX44 427 aaPredicted RBP8.53□□□□□ -1.04
SEC13-214ENST00000476597 SLC31A2O15432 143 aa8.53□□□□□ -1.04
SEC13-214ENST00000476597 PDCD6O75340 191 aa8.53□□□□□ -1.04
SEC13-214ENST00000476597 UBBP0CG47 229 aa8.53□□□□□ -1.04
SEC13-214ENST00000476597 IGLL1P15814 213 aa8.53□□□□□ -1.04
SEC13-214ENST00000476597 IL3RAP26951 378 aa8.53□□□□□ -1.04
SEC13-214ENST00000476597 ZNF137PP52743 207 aa8.53□□□□□ -1.04
SEC13-214ENST00000476597 GABPB1Q06547 395 aaPredicted RBP8.53□□□□□ -1.04
SEC13-214ENST00000476597 GPR50Q13585 617 aa8.53□□□□□ -1.04
SEC13-214ENST00000476597 IRF3Q14653 427 aa8.53□□□□□ -1.04
SEC13-214ENST00000476597 SPHARQ15513 63 aa8.53□□□□□ -1.04
SEC13-214ENST00000476597 C1orf100Q5SVJ3 147 aa8.53□□□□□ -1.04
SEC13-214ENST00000476597 FOXB2Q5VYV0 432 aa8.53□□□□□ -1.04
SEC13-214ENST00000476597 TRAT1Q6PIZ9 186 aa8.53□□□□□ -1.04
SEC13-214ENST00000476597 Q6ZPA2 131 aa8.53□□□□□ -1.04
SEC13-214ENST00000476597 ZNF554Q86TJ5 538 aa8.53□□□□□ -1.04
SEC13-214ENST00000476597 LRRTM1Q86UE6 522 aa8.53□□□□□ -1.04
SEC13-214ENST00000476597 TGIF2LXQ8IUE1 241 aa8.53□□□□□ -1.04
SEC13-214ENST00000476597 OR2T10Q8NGZ9 312 aa8.53□□□□□ -1.04
SEC13-214ENST00000476597 PHYHIPQ92561 330 aa8.53□□□□□ -1.04
SEC13-214ENST00000476597 NOL4LQ96MY1 436 aaPredicted RBP8.53□□□□□ -1.04
SEC13-214ENST00000476597 TAF9BQ9HBM6 251 aa8.53□□□□□ -1.04
SEC13-214ENST00000476597 PLSCR3Q9NRY6 295 aa8.53□□□□□ -1.04
SEC13-214ENST00000476597 MBNL3Q9NUK0 354 aaKnown RBP8.53□□□□□ -1.04
SEC13-214ENST00000476597 SCN3BQ9NY72 215 aa8.53□□□□□ -1.04
SEC13-214ENST00000476597 GNG12Q9UBI6 72 aa8.53□□□□□ -1.04
SEC13-214ENST00000476597 LSM2Q9Y333 95 aaKnown RBP8.53□□□□□ -1.04
SEC13-214ENST00000476597 NCBP2LA6PVI3 153 aaKnown RBP8.52□□□□□ -1.05
SEC13-214ENST00000476597 MPIG6BO95866 241 aa8.52□□□□□ -1.05
SEC13-214ENST00000476597 PF4P02776 101 aa8.52□□□□□ -1.05
SEC13-214ENST00000476597 VSIG8P0DPA2 414 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms