RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 CLDND2Q8NHS1 167 aa7.22□□□□□ -1.25
VAPB-205ENST00000476395 RNASEH2CQ8TDP1 164 aaKnown RBP7.22□□□□□ -1.25
VAPB-205ENST00000476395 TMEM59Q9BXS4 323 aa7.22□□□□□ -1.25
VAPB-205ENST00000476395 NGBQ9NPG2 151 aa7.22□□□□□ -1.25
VAPB-205ENST00000476395 MYOTQ9UBF9 498 aa7.22□□□□□ -1.25
VAPB-205ENST00000476395 COPS7AQ9UBW8 275 aa7.22□□□□□ -1.25
VAPB-205ENST00000476395 A0A1B0GU03 582 aa7.21□□□□□ -1.25
VAPB-205ENST00000476395 E5RGE8 158 aa7.21□□□□□ -1.25
VAPB-205ENST00000476395 GDF9O60383 454 aa7.21□□□□□ -1.25
VAPB-205ENST00000476395 BRS3P32247 399 aa7.21□□□□□ -1.25
VAPB-205ENST00000476395 KISS1Q15726 138 aa7.21□□□□□ -1.25
VAPB-205ENST00000476395 HLA-DQA1Q5Y7H0 255 aa7.21□□□□□ -1.25
VAPB-205ENST00000476395 C20orf196Q8IYI0 205 aa7.21□□□□□ -1.25
VAPB-205ENST00000476395 PCGF1Q9BSM1 259 aa7.21□□□□□ -1.25
VAPB-205ENST00000476395 PCED1AQ9H1Q7 454 aa7.21□□□□□ -1.25
VAPB-205ENST00000476395 VSIRQ9H7M9 311 aa7.21□□□□□ -1.25
VAPB-205ENST00000476395 DNAJC4Q9NNZ3 241 aa7.21□□□□□ -1.25
VAPB-205ENST00000476395 C14orf166Q9Y224 244 aaKnown RBP7.21□□□□□ -1.25
VAPB-205ENST00000476395 NSG2Q9Y328 171 aa7.21□□□□□ -1.25
VAPB-205ENST00000476395 NBEAQ8NFP9 2946 aa7.21□□□□□ -1.25
VAPB-205ENST00000476395 TP53I11O14683 189 aa7.21□□□□□ -1.26
VAPB-205ENST00000476395 TRAPPC6AO75865 159 aa7.21□□□□□ -1.26
VAPB-205ENST00000476395 TK1P04183 234 aa7.21□□□□□ -1.26
VAPB-205ENST00000476395 CTXN2P0C2S0 81 aa7.21□□□□□ -1.26
VAPB-205ENST00000476395 COMPP49747 757 aaPredicted RBP7.21□□□□□ -1.26
VAPB-205ENST00000476395 SOX8P57073 446 aa7.21□□□□□ -1.26
VAPB-205ENST00000476395 CHRFAM7AQ494W8 412 aa7.21□□□□□ -1.26
VAPB-205ENST00000476395 CARD17Q5XLA6 110 aa7.21□□□□□ -1.26
VAPB-205ENST00000476395 DNM1P34Q6PK57 102 aa7.21□□□□□ -1.26
VAPB-205ENST00000476395 FAM57BQ71RH2 274 aa7.21□□□□□ -1.26
VAPB-205ENST00000476395 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.21□□□□□ -1.26
VAPB-205ENST00000476395 KCNG3Q8TAE7 436 aa7.21□□□□□ -1.26
VAPB-205ENST00000476395 DDIT4LQ96D03 193 aa7.21□□□□□ -1.26
VAPB-205ENST00000476395 CDX2Q99626 313 aaPredicted RBP7.21□□□□□ -1.26
VAPB-205ENST00000476395 FGF21Q9NSA1 209 aa7.21□□□□□ -1.26
VAPB-205ENST00000476395 HIF1ANQ9NWT6 349 aa7.21□□□□□ -1.26
VAPB-205ENST00000476395 CHCHD2Q9Y6H1 151 aaPredicted RBP7.21□□□□□ -1.26
VAPB-205ENST00000476395 VSTM2BA6NLU5 285 aa7.21□□□□□ -1.26
VAPB-205ENST00000476395 H3BP45 60 aa7.21□□□□□ -1.26
VAPB-205ENST00000476395 HLA-HP01893 362 aa7.21□□□□□ -1.26
VAPB-205ENST00000476395 CST2P09228 141 aa7.21□□□□□ -1.26
VAPB-205ENST00000476395 NKX2-1P43699 371 aaPredicted RBP7.21□□□□□ -1.26
VAPB-205ENST00000476395 CD81P60033 236 aa7.21□□□□□ -1.26
VAPB-205ENST00000476395 SNAI3Q3KNW1 292 aa7.21□□□□□ -1.26
VAPB-205ENST00000476395 RHBDD2Q6NTF9 364 aa7.21□□□□□ -1.26
VAPB-205ENST00000476395 LCN15Q6UWW0 184 aa7.21□□□□□ -1.26
VAPB-205ENST00000476395 FBXW12Q6X9E4 464 aa7.21□□□□□ -1.26
VAPB-205ENST00000476395 VASH2Q86V25 355 aa7.21□□□□□ -1.26
VAPB-205ENST00000476395 MYPOPQ86VE0 399 aaPredicted RBP7.21□□□□□ -1.26
VAPB-205ENST00000476395 TMEM234Q8WY98 164 aa7.21□□□□□ -1.26
VAPB-205ENST00000476395 EXTL1Q92935 676 aa7.21□□□□□ -1.26
VAPB-205ENST00000476395 IL22RA2Q969J5 263 aa7.21□□□□□ -1.26
VAPB-205ENST00000476395 RNF2Q99496 336 aa7.21□□□□□ -1.26
VAPB-205ENST00000476395 MOB1AQ9H8S9 216 aa7.21□□□□□ -1.26
VAPB-205ENST00000476395 FOXJ2Q9P0K8 574 aa7.21□□□□□ -1.26
VAPB-205ENST00000476395 PAM16Q9Y3D7 125 aa7.21□□□□□ -1.26
VAPB-205ENST00000476395 STRAPQ9Y3F4 350 aaKnown RBP7.21□□□□□ -1.26
VAPB-205ENST00000476395 CRYM-AS1A6NIL9 109 aa7.2□□□□□ -1.26
VAPB-205ENST00000476395 ZNF705FA8MVS1 300 aaPredicted RBP7.2□□□□□ -1.26
VAPB-205ENST00000476395 CLDN34H7C241 214 aa7.2□□□□□ -1.26
VAPB-205ENST00000476395 LCATP04180 440 aa7.2□□□□□ -1.26
VAPB-205ENST00000476395 ZNF705DP0CH99 300 aaPredicted RBP7.2□□□□□ -1.26
VAPB-205ENST00000476395 ZNF705BP0CI00 300 aaPredicted RBP7.2□□□□□ -1.26
VAPB-205ENST00000476395 PET117Q6UWS5 81 aa7.2□□□□□ -1.26
VAPB-205ENST00000476395 OR51T1Q8NGJ9 327 aa7.2□□□□□ -1.26
VAPB-205ENST00000476395 URM1Q9BTM9 101 aaKnown RBP7.2□□□□□ -1.26
VAPB-205ENST00000476395 AURKAIP1Q9NWT8 199 aaPredicted RBP7.2□□□□□ -1.26
VAPB-205ENST00000476395 KIAA1456Q9P272 454 aa7.2□□□□□ -1.26
VAPB-205ENST00000476395 DKKL1Q9UK85 242 aa7.2□□□□□ -1.26
VAPB-205ENST00000476395 TCFL5Q9UL49 500 aa7.2□□□□□ -1.26
VAPB-205ENST00000476395 LOC102725191A0A1B0GVB3 256 aa7.2□□□□□ -1.26
VAPB-205ENST00000476395 AQP7P3A6NL99 342 aa7.2□□□□□ -1.26
VAPB-205ENST00000476395 H0Y8G0 127 aa7.2□□□□□ -1.26
VAPB-205ENST00000476395 HMGB3O15347 200 aaKnown RBP7.2□□□□□ -1.26
VAPB-205ENST00000476395 TMEM50AO95807 157 aa7.2□□□□□ -1.26
VAPB-205ENST00000476395 HPRT1P00492 218 aa7.2□□□□□ -1.26
VAPB-205ENST00000476395 PDGFBP01127 241 aaPredicted RBP7.2□□□□□ -1.26
VAPB-205ENST00000476395 IFNA21P01568 189 aa7.2□□□□□ -1.26
VAPB-205ENST00000476395 CELA2AP08217 269 aa7.2□□□□□ -1.26
VAPB-205ENST00000476395 BLVRBP30043 206 aaPredicted RBP7.2□□□□□ -1.26
VAPB-205ENST00000476395 ADIRFQ15847 76 aa7.2□□□□□ -1.26
VAPB-205ENST00000476395 CST9LP1Q5W188 147 aa7.2□□□□□ -1.26
VAPB-205ENST00000476395 C16orf82Q7Z2V1 217 aa7.2□□□□□ -1.26
VAPB-205ENST00000476395 FBXL14Q8N1E6 418 aa7.2□□□□□ -1.26
VAPB-205ENST00000476395 ZIC4Q8N9L1 334 aa7.2□□□□□ -1.26
VAPB-205ENST00000476395 OR5C1Q8NGR4 320 aa7.2□□□□□ -1.26
VAPB-205ENST00000476395 EMG1Q92979 244 aaKnown RBP7.2□□□□□ -1.26
VAPB-205ENST00000476395 Q96M66 194 aa7.2□□□□□ -1.26
VAPB-205ENST00000476395 GPER1Q99527 375 aa7.2□□□□□ -1.26
VAPB-205ENST00000476395 OR10A2Q9H208 303 aa7.2□□□□□ -1.26
VAPB-205ENST00000476395 SSSCA1O60232 199 aa7.2□□□□□ -1.26
VAPB-205ENST00000476395 OR2J2O76002 312 aa7.2□□□□□ -1.26
VAPB-205ENST00000476395 FAHP16930 419 aa7.2□□□□□ -1.26
VAPB-205ENST00000476395 IDH3GP51553 393 aaPredicted RBP7.2□□□□□ -1.26
VAPB-205ENST00000476395 PDCD1Q15116 288 aa7.2□□□□□ -1.26
VAPB-205ENST00000476395 KRTAP27-1Q3LI81 207 aa7.2□□□□□ -1.26
VAPB-205ENST00000476395 ERASQ7Z444 233 aa7.2□□□□□ -1.26
VAPB-205ENST00000476395 BATF2Q8N1L9 274 aa7.2□□□□□ -1.26
VAPB-205ENST00000476395 C11orf42Q8N5U0 333 aa7.2□□□□□ -1.26
VAPB-205ENST00000476395 NINJ1Q92982 152 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms