RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 YPEL4Q96NS1 127 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 RAB33BQ9H082 229 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 KCNE5Q9UJ90 142 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 HEATR1Q9H583 2144 aaKnown RBP10.15□□□□□ -0.78
U2AF1-209ENST00000475639 MTCL1Q9Y4B5 1905 aaKnown RBP10.15□□□□□ -0.78
U2AF1-209ENST00000475639 TRBV6-7A0A0A0MS04 114 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 A0A1W2PR48 441 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 H0YIZ8 118 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 OR10J1P30954 320 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 BRS3P32247 399 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 PRRX1P54821 245 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 TCL1AP56279 114 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 CD81P60033 236 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 TWIST1Q15672 202 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 BCORP1Q8N888 145 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 ZNF738Q8NE65 137 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 OR5R1Q8NH85 324 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 OR6C3Q9NZP0 311 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 B9D1Q9UPM9 204 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 SIGLEC7Q9Y286 467 aa10.15□□□□□ -0.78
U2AF1-209ENST00000475639 hADV38S2A0JD32 116 aa10.15□□□□□ -0.79
U2AF1-209ENST00000475639 GAGE10A6NGK3 116 aa10.15□□□□□ -0.79
U2AF1-209ENST00000475639 PGA4P0DJD7 388 aa10.15□□□□□ -0.79
U2AF1-209ENST00000475639 PGA5P0DJD9 388 aa10.15□□□□□ -0.79
U2AF1-209ENST00000475639 MAS1LP35410 378 aa10.15□□□□□ -0.79
U2AF1-209ENST00000475639 FAM78AQ5JUQ0 283 aa10.15□□□□□ -0.79
U2AF1-209ENST00000475639 ERASQ7Z444 233 aa10.15□□□□□ -0.79
U2AF1-209ENST00000475639 OR2D3Q8NGH3 330 aa10.15□□□□□ -0.79
U2AF1-209ENST00000475639 SOX21Q9Y651 276 aaPredicted RBP10.15□□□□□ -0.79
U2AF1-209ENST00000475639 TRAV8-7A0A075B6U6 113 aa10.14□□□□□ -0.79
U2AF1-209ENST00000475639 SPRY3O43610 288 aa10.14□□□□□ -0.79
U2AF1-209ENST00000475639 LGALS7P47929 136 aa10.14□□□□□ -0.79
U2AF1-209ENST00000475639 IL24Q13007 206 aa10.14□□□□□ -0.79
U2AF1-209ENST00000475639 TMEM183AQ8IXX5 376 aa10.14□□□□□ -0.79
U2AF1-209ENST00000475639 FOXB1Q99853 325 aa10.14□□□□□ -0.79
U2AF1-209ENST00000475639 ELOVL1Q9BW60 279 aa10.14□□□□□ -0.79
U2AF1-209ENST00000475639 CACNG5Q9UF02 275 aa10.14□□□□□ -0.79
U2AF1-209ENST00000475639 IL17BQ9UHF5 180 aa10.14□□□□□ -0.79
U2AF1-209ENST00000475639 PRSS50Q9UI38 385 aa10.14□□□□□ -0.79
U2AF1-209ENST00000475639 M0R296 226 aa10.14□□□□□ -0.79
U2AF1-209ENST00000475639 GNG7O60262 68 aa10.14□□□□□ -0.79
U2AF1-209ENST00000475639 SOD3P08294 240 aa10.14□□□□□ -0.79
U2AF1-209ENST00000475639 HTN1P15515 57 aa10.14□□□□□ -0.79
U2AF1-209ENST00000475639 SRP14P37108 136 aaKnown RBP10.14□□□□□ -0.79
U2AF1-209ENST00000475639 COMPP49747 757 aaPredicted RBP10.14□□□□□ -0.79
U2AF1-209ENST00000475639 SUMO3P55854 103 aaPredicted RBP10.14□□□□□ -0.79
U2AF1-209ENST00000475639 LYZP61626 148 aa10.14□□□□□ -0.79
U2AF1-209ENST00000475639 PAFAH1B2P68402 229 aa10.14□□□□□ -0.79
U2AF1-209ENST00000475639 BTG2P78543 158 aa10.14□□□□□ -0.79
U2AF1-209ENST00000475639 KHDC3LQ587J8 217 aa10.14□□□□□ -0.79
U2AF1-209ENST00000475639 STXBP6Q8NFX7 210 aa10.14□□□□□ -0.79
U2AF1-209ENST00000475639 ANAPC16Q96DE5 110 aa10.14□□□□□ -0.79
U2AF1-209ENST00000475639 PACRGQ96M98 296 aaPredicted RBP10.14□□□□□ -0.79
U2AF1-209ENST00000475639 OR2A5Q96R48 311 aa10.14□□□□□ -0.79
U2AF1-209ENST00000475639 FGF22Q9HCT0 170 aa10.14□□□□□ -0.79
U2AF1-209ENST00000475639 PRDM7Q9NQW5 492 aa10.14□□□□□ -0.79
U2AF1-209ENST00000475639 SLC17A5Q9NRA2 495 aa10.14□□□□□ -0.79
U2AF1-209ENST00000475639 PSG11Q9UQ72 335 aa10.14□□□□□ -0.79
U2AF1-209ENST00000475639 DOCK10Q96BY6 2186 aa10.14□□□□□ -0.79
U2AF1-209ENST00000475639 PRR32B1ATL7 298 aa10.14□□□□□ -0.79
U2AF1-209ENST00000475639 FGF17O60258 216 aa10.14□□□□□ -0.79
U2AF1-209ENST00000475639 PRSS2P07478 247 aa10.14□□□□□ -0.79
U2AF1-209ENST00000475639 METAP1P53582 386 aa10.14□□□□□ -0.79
U2AF1-209ENST00000475639 ERVS71-1P61550 626 aa10.14□□□□□ -0.79
U2AF1-209ENST00000475639 D2HGDHQ8N465 521 aa10.14□□□□□ -0.79
U2AF1-209ENST00000475639 AKIRIN1Q9H9L7 192 aaPredicted RBP10.14□□□□□ -0.79
U2AF1-209ENST00000475639 PLA2G2EQ9NZK7 142 aa10.14□□□□□ -0.79
U2AF1-209ENST00000475639 ZFP30Q9Y2G7 519 aa10.14□□□□□ -0.79
U2AF1-209ENST00000475639 SPTBP11277 2137 aa10.14□□□□□ -0.79
U2AF1-209ENST00000475639 CDRT15L2A8MXV6 281 aa10.13□□□□□ -0.79
U2AF1-209ENST00000475639 B4DEV8 164 aa10.13□□□□□ -0.79
U2AF1-209ENST00000475639 ADAM20O43506 726 aa10.13□□□□□ -0.79
U2AF1-209ENST00000475639 HAND1O96004 215 aa10.13□□□□□ -0.79
U2AF1-209ENST00000475639 CRYABP02511 175 aaKnown RBP10.13□□□□□ -0.79
U2AF1-209ENST00000475639 TNFRSF9Q07011 255 aa10.13□□□□□ -0.79
U2AF1-209ENST00000475639 DNLZQ5SXM8 178 aa10.13□□□□□ -0.79
U2AF1-209ENST00000475639 OR10V1Q8NGI7 309 aa10.13□□□□□ -0.79
U2AF1-209ENST00000475639 TBX15Q96SF7 602 aa10.13□□□□□ -0.79
U2AF1-209ENST00000475639 RNF186Q9NXI6 227 aa10.13□□□□□ -0.79
U2AF1-209ENST00000475639 CLEC1BQ9P126 229 aa10.13□□□□□ -0.79
U2AF1-209ENST00000475639 NPIPB6E9PJ23 425 aa10.13□□□□□ -0.79
U2AF1-209ENST00000475639 H0YIG0 161 aa10.13□□□□□ -0.79
U2AF1-209ENST00000475639 K7EQS6 105 aa10.13□□□□□ -0.79
U2AF1-209ENST00000475639 ISLRO14498 428 aa10.13□□□□□ -0.79
U2AF1-209ENST00000475639 RAB32Q13637 225 aa10.13□□□□□ -0.79
U2AF1-209ENST00000475639 TMEM52BQ4KMG9 183 aa10.13□□□□□ -0.79
U2AF1-209ENST00000475639 NUP37Q8NFH4 326 aa10.13□□□□□ -0.79
U2AF1-209ENST00000475639 OR2V1Q8NHB1 315 aa10.13□□□□□ -0.79
U2AF1-209ENST00000475639 C16orf52Q8NHV5 167 aa10.13□□□□□ -0.79
U2AF1-209ENST00000475639 ALKBH3Q96Q83 286 aaPredicted RBP10.13□□□□□ -0.79
U2AF1-209ENST00000475639 THAP10Q9P2Z0 257 aaPredicted RBP10.13□□□□□ -0.79
U2AF1-209ENST00000475639 PAM16Q9Y3D7 125 aa10.13□□□□□ -0.79
U2AF1-209ENST00000475639 AMMECR1Q9Y4X0 333 aaPredicted RBP10.13□□□□□ -0.79
U2AF1-209ENST00000475639 VWA8A3KMH1 1905 aa10.13□□□□□ -0.79
U2AF1-209ENST00000475639 MARCH11A6NNE9 402 aa10.13□□□□□ -0.79
U2AF1-209ENST00000475639 RPL36A-HNRNPH2H7BZ11 118 aa10.13□□□□□ -0.79
U2AF1-209ENST00000475639 FABP2P12104 132 aa10.13□□□□□ -0.79
U2AF1-209ENST00000475639 TMEM267Q0VDI3 215 aaPredicted RBP10.13□□□□□ -0.79
U2AF1-209ENST00000475639 PRSS54Q6PEW0 395 aa10.13□□□□□ -0.79
U2AF1-209ENST00000475639 OR8A1Q8NGG7 326 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms