RNA–Protein interactions for RNA: ENST00000475315.5

FXR1-211, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 2,341 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-211	ENST00000475315	RPP25L	Q8N5L8	163 aa	Known RBP	10.09	□□□□□ -0.79
FXR1-211	ENST00000475315	ZNF738	Q8NE65	137 aa		10.09	□□□□□ -0.79
FXR1-211	ENST00000475315	PINX1	Q96BK5	328 aa	Known RBP	10.09	□□□□□ -0.79
FXR1-211	ENST00000475315	ZNF703	Q9H7S9	590 aa	Predicted RBP	10.09	□□□□□ -0.79
FXR1-211	ENST00000475315	SEPSECS	Q9HD40	501 aa	Known RBP	10.09	□□□□□ -0.79
FXR1-211	ENST00000475315	ARHGAP21	Q5T5U3	1957 aa		10.09	□□□□□ -0.79
FXR1-211	ENST00000475315	NCOA6	Q14686	2063 aa	Predicted RBP	10.09	□□□□□ -0.79
FXR1-211	ENST00000475315	MANSC4	A6NHS7	340 aa	Predicted RBP	10.08	□□□□□ -0.8
FXR1-211	ENST00000475315	HOXB2	P14652	356 aa		10.08	□□□□□ -0.8
FXR1-211	ENST00000475315	CDA	P32320	146 aa		10.08	□□□□□ -0.8
FXR1-211	ENST00000475315	PSMB3	P49720	205 aa		10.08	□□□□□ -0.8
FXR1-211	ENST00000475315	MFAP5	Q13361	173 aa		10.08	□□□□□ -0.8
FXR1-211	ENST00000475315	SPATA45	Q537H7	98 aa		10.08	□□□□□ -0.8
FXR1-211	ENST00000475315	CNKSR3	Q6P9H4	555 aa		10.08	□□□□□ -0.8
FXR1-211	ENST00000475315	ZNF709	Q8N972	641 aa		10.08	□□□□□ -0.8
FXR1-211	ENST00000475315	PP6455	Q8WZ26	134 aa		10.08	□□□□□ -0.8
FXR1-211	ENST00000475315	RNF2	Q99496	336 aa		10.08	□□□□□ -0.8
FXR1-211	ENST00000475315	PARD6G	Q9BYG4	376 aa	Predicted RBP	10.08	□□□□□ -0.8
FXR1-211	ENST00000475315	HSPB7	Q9UBY9	170 aa		10.08	□□□□□ -0.8
FXR1-211	ENST00000475315	POLR1D	Q9Y2S0	133 aa		10.08	□□□□□ -0.8
FXR1-211	ENST00000475315	TIAF1	O95411	115 aa		10.08	□□□□□ -0.8
FXR1-211	ENST00000475315	IGHG1	P01857	330 aa		10.08	□□□□□ -0.8
FXR1-211	ENST00000475315	NPPC	P23582	126 aa		10.08	□□□□□ -0.8
FXR1-211	ENST00000475315	FBLN7	Q53RD9	439 aa		10.08	□□□□□ -0.8
FXR1-211	ENST00000475315	BRICD5	Q6PL45	260 aa		10.08	□□□□□ -0.8
FXR1-211	ENST00000475315	GATAD1	Q8WUU5	269 aa		10.08	□□□□□ -0.8
FXR1-211	ENST00000475315	SLC39A9	Q9NUM3	307 aa		10.08	□□□□□ -0.8
FXR1-211	ENST00000475315	DOCK11	Q5JSL3	2073 aa		10.08	□□□□□ -0.8
FXR1-211	ENST00000475315	DNAH14	Q0VDD8	3507 aa		10.07	□□□□□ -0.8
FXR1-211	ENST00000475315		A0A0G2JRQ6	117 aa		10.07	□□□□□ -0.8
FXR1-211	ENST00000475315		A0A1W2PNV4	684 aa		10.07	□□□□□ -0.8
FXR1-211	ENST00000475315		M0QZ24	198 aa		10.07	□□□□□ -0.8
FXR1-211	ENST00000475315	DHRS3	O75911	302 aa		10.07	□□□□□ -0.8
FXR1-211	ENST00000475315	OR2J2	O76002	312 aa		10.07	□□□□□ -0.8
FXR1-211	ENST00000475315	POU2F2	P09086	479 aa		10.07	□□□□□ -0.8
FXR1-211	ENST00000475315	CTSS	P25774	331 aa		10.07	□□□□□ -0.8
FXR1-211	ENST00000475315	TLE3	Q04726	772 aa		10.07	□□□□□ -0.8
FXR1-211	ENST00000475315	TESK1	Q15569	626 aa		10.07	□□□□□ -0.8
FXR1-211	ENST00000475315	RD3	Q7Z3Z2	195 aa		10.07	□□□□□ -0.8
FXR1-211	ENST00000475315	OR4F5	Q8NH21	305 aa		10.07	□□□□□ -0.8
FXR1-211	ENST00000475315	APH1A	Q96BI3	265 aa		10.07	□□□□□ -0.8
FXR1-211	ENST00000475315	OR4F4	Q96R69	305 aa		10.07	□□□□□ -0.8
FXR1-211	ENST00000475315	CSTL1	Q9H114	145 aa		10.07	□□□□□ -0.8
FXR1-211	ENST00000475315	PATZ1	Q9HBE1	687 aa	Known RBP	10.07	□□□□□ -0.8
FXR1-211	ENST00000475315	HRASLS2	Q9NWW9	162 aa		10.07	□□□□□ -0.8
FXR1-211	ENST00000475315	ANGPTL7	O43827	346 aa		10.07	□□□□□ -0.8
FXR1-211	ENST00000475315	IGKV3-11	P04433	115 aa		10.07	□□□□□ -0.8
FXR1-211	ENST00000475315	IL12B	P29460	328 aa		10.07	□□□□□ -0.8
FXR1-211	ENST00000475315	HNRNPA3	P51991	378 aa	Known RBP	10.07	□□□□□ -0.8
FXR1-211	ENST00000475315	ASCL4	Q6XD76	172 aa		10.07	□□□□□ -0.8
FXR1-211	ENST00000475315	ZNF818P	Q6ZRF7	136 aa		10.07	□□□□□ -0.8
FXR1-211	ENST00000475315	PATE1	Q8WXA2	126 aa		10.07	□□□□□ -0.8
FXR1-211	ENST00000475315	PGAM5	Q96HS1	289 aa		10.07	□□□□□ -0.8
FXR1-211	ENST00000475315	RAB40C	Q96S21	281 aa		10.07	□□□□□ -0.8
FXR1-211	ENST00000475315	GPHA2	Q96T91	129 aa		10.07	□□□□□ -0.8
FXR1-211	ENST00000475315	WDR61	Q9GZS3	305 aa	Known RBP	10.07	□□□□□ -0.8
FXR1-211	ENST00000475315	ST3GAL6	Q9Y274	331 aa		10.07	□□□□□ -0.8
FXR1-211	ENST00000475315	RALGAPA1	Q6GYQ0	2036 aa		10.06	□□□□□ -0.8
FXR1-211	ENST00000475315		A0A0U1RQV5	110 aa		10.06	□□□□□ -0.8
FXR1-211	ENST00000475315	ANKUB1	A6NFN9	424 aa		10.06	□□□□□ -0.8
FXR1-211	ENST00000475315	CBY3	A6NI87	242 aa		10.06	□□□□□ -0.8
FXR1-211	ENST00000475315	OPN1LW	P04000	364 aa		10.06	□□□□□ -0.8
FXR1-211	ENST00000475315	WAS	P42768	502 aa		10.06	□□□□□ -0.8
FXR1-211	ENST00000475315	GRB2	P62993	217 aa	Known RBP	10.06	□□□□□ -0.8
FXR1-211	ENST00000475315	OR8B8	Q15620	311 aa		10.06	□□□□□ -0.8
FXR1-211	ENST00000475315	SLC25A47	Q6Q0C1	308 aa		10.06	□□□□□ -0.8
FXR1-211	ENST00000475315		Q6ZN92	141 aa		10.06	□□□□□ -0.8
FXR1-211	ENST00000475315	TSACC	Q96A04	125 aa	Predicted RBP	10.06	□□□□□ -0.8
FXR1-211	ENST00000475315	SLC7A10	Q9NS82	523 aa		10.06	□□□□□ -0.8
FXR1-211	ENST00000475315	RYDEN	Q9NUL5	291 aa	Known RBP	10.06	□□□□□ -0.8
FXR1-211	ENST00000475315	TRAV30	A0A087WSZ9	112 aa		10.06	□□□□□ -0.8
FXR1-211	ENST00000475315	C1QTNF9B	B2RNN3	333 aa		10.06	□□□□□ -0.8
FXR1-211	ENST00000475315	TMEM238	C9JI98	176 aa		10.06	□□□□□ -0.8
FXR1-211	ENST00000475315	DIRC3	C9JPN6	131 aa		10.06	□□□□□ -0.8
FXR1-211	ENST00000475315		F2Z2F3	143 aa		10.06	□□□□□ -0.8
FXR1-211	ENST00000475315	TMPRSS2	O15393	492 aa		10.06	□□□□□ -0.8
FXR1-211	ENST00000475315	SPRY1	O43609	319 aa	Predicted RBP	10.06	□□□□□ -0.8
FXR1-211	ENST00000475315	CIDEA	O60543	219 aa		10.06	□□□□□ -0.8
FXR1-211	ENST00000475315	VIPR2	P41587	438 aa		10.06	□□□□□ -0.8
FXR1-211	ENST00000475315	DLX2	Q07687	328 aa	Predicted RBP	10.06	□□□□□ -0.8
FXR1-211	ENST00000475315	FFAR4	Q5NUL3	377 aa		10.06	□□□□□ -0.8
FXR1-211	ENST00000475315	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	10.06	□□□□□ -0.8
FXR1-211	ENST00000475315	OR4C5	Q8NGB2	326 aa		10.06	□□□□□ -0.8
FXR1-211	ENST00000475315	OR5D13	Q8NGL4	314 aa		10.06	□□□□□ -0.8
FXR1-211	ENST00000475315	NEIL1	Q96FI4	390 aa	Predicted RBP	10.06	□□□□□ -0.8
FXR1-211	ENST00000475315	TXN2	Q99757	166 aa		10.06	□□□□□ -0.8
FXR1-211	ENST00000475315	NUDT22	Q9BRQ3	303 aa		10.06	□□□□□ -0.8
FXR1-211	ENST00000475315	ZDHHC11	Q9H8X9	412 aa		10.06	□□□□□ -0.8
FXR1-211	ENST00000475315	PIGL	Q9Y2B2	252 aa		10.06	□□□□□ -0.8
FXR1-211	ENST00000475315	LRP4	O75096	1905 aa		10.05	□□□□□ -0.8
FXR1-211	ENST00000475315	IGKV1-27	A0A075B6S5	117 aa		10.05	□□□□□ -0.8
FXR1-211	ENST00000475315	SLC31A1	O15431	190 aa		10.05	□□□□□ -0.8
FXR1-211	ENST00000475315	CRISP2	P16562	243 aa		10.05	□□□□□ -0.8
FXR1-211	ENST00000475315	BLK	P51451	505 aa		10.05	□□□□□ -0.8
FXR1-211	ENST00000475315	RPS20	P60866	119 aa	Known RBP	10.05	□□□□□ -0.8
FXR1-211	ENST00000475315	SUMO1	P63165	101 aa	Known RBP	10.05	□□□□□ -0.8
FXR1-211	ENST00000475315		Q0VG73	95 aa		10.05	□□□□□ -0.8
FXR1-211	ENST00000475315	LHX8	Q68G74	356 aa		10.05	□□□□□ -0.8
FXR1-211	ENST00000475315	VHLL	Q6RSH7	139 aa		10.05	□□□□□ -0.8
FXR1-211	ENST00000475315	MYPOP	Q86VE0	399 aa	Predicted RBP	10.05	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms