RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 M0R1B8 84 aa8.24□□□□□ -1.09
USP39-214ENST00000474572 PITX3O75364 302 aa8.24□□□□□ -1.09
USP39-214ENST00000474572 JTBO76095 146 aa8.24□□□□□ -1.09
USP39-214ENST00000474572 SCGB1D2O95969 90 aa8.24□□□□□ -1.09
USP39-214ENST00000474572 CRYAAP02489 173 aa8.24□□□□□ -1.09
USP39-214ENST00000474572 GATA4P43694 442 aa8.24□□□□□ -1.09
USP39-214ENST00000474572 SULT1A2P50226 295 aa8.24□□□□□ -1.09
USP39-214ENST00000474572 TMEM33P57088 247 aa8.24□□□□□ -1.09
USP39-214ENST00000474572 RPS23P62266 143 aaKnown RBP8.24□□□□□ -1.09
USP39-214ENST00000474572 ID3Q02535 119 aa8.24□□□□□ -1.09
USP39-214ENST00000474572 EIF4EBP1Q13541 118 aaPredicted RBP8.24□□□□□ -1.09
USP39-214ENST00000474572 MST1LQ2TV78 715 aa8.24□□□□□ -1.09
USP39-214ENST00000474572 CR1LQ2VPA4 569 aa8.24□□□□□ -1.09
USP39-214ENST00000474572 SMIM21Q3B7S5 101 aa8.24□□□□□ -1.09
USP39-214ENST00000474572 EIF5AL1Q6IS14 154 aaKnown RBP8.24□□□□□ -1.09
USP39-214ENST00000474572 UQCC3Q6UW78 93 aa8.24□□□□□ -1.09
USP39-214ENST00000474572 LRP11Q86VZ4 500 aa8.24□□□□□ -1.09
USP39-214ENST00000474572 DOLPP1Q86YN1 238 aa8.24□□□□□ -1.09
USP39-214ENST00000474572 STPG2Q8N412 459 aa8.24□□□□□ -1.09
USP39-214ENST00000474572 ZBTB34Q8NCN2 500 aa8.24□□□□□ -1.09
USP39-214ENST00000474572 FAM216AQ8WUB2 273 aa8.24□□□□□ -1.09
USP39-214ENST00000474572 TMEM171Q8WVE6 324 aa8.24□□□□□ -1.09
USP39-214ENST00000474572 TMED6Q8WW62 240 aa8.24□□□□□ -1.09
USP39-214ENST00000474572 LSM10Q969L4 123 aaKnown RBP8.24□□□□□ -1.09
USP39-214ENST00000474572 ERGIC1Q969X5 290 aa8.24□□□□□ -1.09
USP39-214ENST00000474572 SAT2Q96F10 170 aaPredicted RBP8.24□□□□□ -1.09
USP39-214ENST00000474572 SMIM8Q96KF7 97 aa8.24□□□□□ -1.09
USP39-214ENST00000474572 MEGF10Q96KG7 1140 aa8.24□□□□□ -1.09
USP39-214ENST00000474572 LURAP1Q96LR2 239 aa8.24□□□□□ -1.09
USP39-214ENST00000474572 SCNM1Q9BWG6 230 aa8.24□□□□□ -1.09
USP39-214ENST00000474572 JKAMPQ9P055 326 aa8.24□□□□□ -1.09
USP39-214ENST00000474572 FZR1Q9UM11 496 aa8.24□□□□□ -1.09
USP39-214ENST00000474572 KIAA1324LA8MWY0 1029 aaPredicted RBP8.23□□□□□ -1.09
USP39-214ENST00000474572 C12orf77C9JDV5 145 aa8.23□□□□□ -1.09
USP39-214ENST00000474572 PRRG2O14669 202 aa8.23□□□□□ -1.09
USP39-214ENST00000474572 ADAM20O43506 726 aa8.23□□□□□ -1.09
USP39-214ENST00000474572 ZNF737O75373 536 aa8.23□□□□□ -1.09
USP39-214ENST00000474572 CRYZL1O95825 349 aa8.23□□□□□ -1.09
USP39-214ENST00000474572 LHBP01229 141 aa8.23□□□□□ -1.09
USP39-214ENST00000474572 IGKV1-39P01597 117 aa8.23□□□□□ -1.09
USP39-214ENST00000474572 IGKV1D-39P04432 117 aa8.23□□□□□ -1.09
USP39-214ENST00000474572 EGR1P18146 543 aa8.23□□□□□ -1.09
USP39-214ENST00000474572 M6PRP20645 277 aa8.23□□□□□ -1.09
USP39-214ENST00000474572 NKX2-1P43699 371 aaPredicted RBP8.23□□□□□ -1.09
USP39-214ENST00000474572 KLF3P57682 345 aaPredicted RBP8.23□□□□□ -1.09
USP39-214ENST00000474572 COL10A1Q03692 680 aa8.23□□□□□ -1.09
USP39-214ENST00000474572 TRAT1Q6PIZ9 186 aa8.23□□□□□ -1.09
USP39-214ENST00000474572 SSX8Q7RTT4 187 aa8.23□□□□□ -1.09
USP39-214ENST00000474572 FOXRED2Q8IWF2 684 aa8.23□□□□□ -1.09
USP39-214ENST00000474572 GCSAMQ8N6F7 178 aa8.23□□□□□ -1.09
USP39-214ENST00000474572 NUP37Q8NFH4 326 aa8.23□□□□□ -1.09
USP39-214ENST00000474572 OR1S2Q8NGQ3 325 aa8.23□□□□□ -1.09
USP39-214ENST00000474572 LRRC29Q8WV35 223 aa8.23□□□□□ -1.09
USP39-214ENST00000474572 MARC2Q969Z3 335 aa8.23□□□□□ -1.09
USP39-214ENST00000474572 MUCL1Q96DR8 90 aa8.23□□□□□ -1.09
USP39-214ENST00000474572 GINS3Q9BRX5 216 aa8.23□□□□□ -1.09
USP39-214ENST00000474572 NCOR1P1Q9H4R4 102 aa8.23□□□□□ -1.09
USP39-214ENST00000474572 OR2S2Q9NQN1 319 aa8.23□□□□□ -1.09
USP39-214ENST00000474572 ELOVL5Q9NYP7 299 aa8.23□□□□□ -1.09
USP39-214ENST00000474572 LPAR3Q9UBY5 353 aa8.23□□□□□ -1.09
USP39-214ENST00000474572 OR14J1Q9UGF5 321 aa8.23□□□□□ -1.09
USP39-214ENST00000474572 MSRB2Q9Y3D2 182 aa8.23□□□□□ -1.09
USP39-214ENST00000474572 TRAV39A0A0B4J263 110 aa8.22□□□□□ -1.09
USP39-214ENST00000474572 A0A0G2JNJ9 132 aa8.22□□□□□ -1.09
USP39-214ENST00000474572 A0A0G2JRQ6 117 aa8.22□□□□□ -1.09
USP39-214ENST00000474572 IGHV3-64DA0A0J9YX35 117 aa8.22□□□□□ -1.09
USP39-214ENST00000474572 A0A1B0GU03 582 aa8.22□□□□□ -1.09
USP39-214ENST00000474572 SEC11BP0C7V7 166 aa8.22□□□□□ -1.09
USP39-214ENST00000474572 PSG2P11465 335 aa8.22□□□□□ -1.09
USP39-214ENST00000474572 EWSR1Q01844 656 aaKnown RBP eCLIP8.22□□□□□ -1.09
USP39-214ENST00000474572 FAM27E3Q08E93 113 aa8.22□□□□□ -1.09
USP39-214ENST00000474572 GNMTQ14749 295 aa8.22□□□□□ -1.09
USP39-214ENST00000474572 ZNF585BQ52M93 769 aa8.22□□□□□ -1.09
USP39-214ENST00000474572 IL34Q6ZMJ4 242 aa8.22□□□□□ -1.09
USP39-214ENST00000474572 ODF3L1Q8IXM7 274 aa8.22□□□□□ -1.09
USP39-214ENST00000474572 OR2C3Q8N628 320 aa8.22□□□□□ -1.09
USP39-214ENST00000474572 DRAM1Q8N682 238 aa8.22□□□□□ -1.09
USP39-214ENST00000474572 CD177Q8N6Q3 437 aa8.22□□□□□ -1.09
USP39-214ENST00000474572 ZNF645Q8N7E2 425 aa8.22□□□□□ -1.09
USP39-214ENST00000474572 OR2Z1Q8NG97 314 aa8.22□□□□□ -1.09
USP39-214ENST00000474572 OR1L1Q8NH94 360 aa8.22□□□□□ -1.09
USP39-214ENST00000474572 LYPD6BQ8NI32 183 aa8.22□□□□□ -1.09
USP39-214ENST00000474572 FAM222BQ8WU58 562 aa8.22□□□□□ -1.09
USP39-214ENST00000474572 IL1F10Q8WWZ1 152 aa8.22□□□□□ -1.09
USP39-214ENST00000474572 GPR146Q96CH1 333 aa8.22□□□□□ -1.09
USP39-214ENST00000474572 BSCL2Q96G97 398 aaPredicted RBP8.22□□□□□ -1.09
USP39-214ENST00000474572 GPHA2Q96T91 129 aa8.22□□□□□ -1.09
USP39-214ENST00000474572 PARP12Q9H0J9 701 aaKnown RBP8.22□□□□□ -1.09
USP39-214ENST00000474572 NARFLQ9H6Q4 476 aa8.22□□□□□ -1.09
USP39-214ENST00000474572 WFDC1Q9HC57 220 aa8.22□□□□□ -1.09
USP39-214ENST00000474572 MMP26Q9NRE1 261 aa8.22□□□□□ -1.09
USP39-214ENST00000474572 FAM212BQ9NTI7 297 aaPredicted RBP8.22□□□□□ -1.09
USP39-214ENST00000474572 LYRM2Q9NU23 88 aaPredicted RBP8.22□□□□□ -1.09
USP39-214ENST00000474572 LIN7CQ9NUP9 197 aaKnown RBP8.22□□□□□ -1.09
USP39-214ENST00000474572 UFSP2Q9NUQ7 469 aa8.22□□□□□ -1.09
USP39-214ENST00000474572 KCNIP1Q9NZI2 227 aa8.22□□□□□ -1.09
USP39-214ENST00000474572 PLA2G2EQ9NZK7 142 aa8.22□□□□□ -1.09
USP39-214ENST00000474572 Q9UFV3 132 aa8.22□□□□□ -1.09
USP39-214ENST00000474572 METRNQ9UJH8 293 aa8.22□□□□□ -1.09
USP39-214ENST00000474572 RNF115Q9Y4L5 304 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms