RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 IGHV2OR16-5A0A0B4J2B6 119 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 A0A0U1RQK1 487 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 IGSF23A1L1A6 192 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 ZNF320A2RRD8 509 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 SMIM30A4D0T7 59 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 OR4C46A6NHA9 309 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 KRBOX1C9JBD0 128 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 GLI4P10075 376 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 SLC25A6P12236 298 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 UCP3P55916 312 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 UBE2KP61086 200 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 PAPPA-AS1Q5QFB9 102 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 MBNL2Q5VZF2 373 aaKnown RBP3.98□□□□□ -1.77
CCNL1-215ENST00000474539 DMKNQ6E0U4 476 aaPredicted RBP3.98□□□□□ -1.77
CCNL1-215ENST00000474539 CGB2Q6NT52 195 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 FAM71F2Q6NXP2 309 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 H3F3CQ6NXT2 135 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 ZNF600Q6ZNG1 722 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 OR8I2Q8N0Y5 310 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 ZFP82Q8N141 532 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 ABHD12Q8N2K0 398 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 MDS2Q8NDY4 140 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 FAM213BQ8TBF2 198 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 MRPL30Q8TCC3 161 aaKnown RBP3.98□□□□□ -1.77
CCNL1-215ENST00000474539 ZG16BQ96DA0 208 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 SNRNP40Q96DI7 357 aaKnown RBP3.98□□□□□ -1.77
CCNL1-215ENST00000474539 WDFY2Q96P53 400 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 ZDHHC11Q9H8X9 412 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 PARP11Q9NR21 331 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 HIGD1AQ9Y241 93 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 POMT1Q9Y6A1 747 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 TRIP11Q15643 1979 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 SERTM2A0A1B0GWG4 89 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 TMEM235A6NFC5 223 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 RFPL4AA6NLU0 287 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 RFPL4AL1F8VTS6 287 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 TCAPO15273 167 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 NDUFB6O95139 128 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 THY1P04216 161 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 CTRB1P17538 263 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 RPL12P30050 165 aaKnown RBP3.98□□□□□ -1.77
CCNL1-215ENST00000474539 P2RY1P47900 373 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 CCL8P80075 99 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 BSPH1Q075Z2 132 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 SLC38A11Q08AI6 406 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 ZNF816Q0VGE8 651 aaPredicted RBP3.98□□□□□ -1.77
CCNL1-215ENST00000474539 CTRB2Q6GPI1 263 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 ZNF385AQ96PM9 386 aaKnown RBP3.98□□□□□ -1.77
CCNL1-215ENST00000474539 PRSS50Q9UI38 385 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 CCL27Q9Y4X3 112 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 MGAMO43451 1857 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 A0A1B0GTI1 187 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 A0A1W2PR80 420 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 ASPDHA6ND91 283 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 DBX1A6NMT0 343 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 H7C1H1 209 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 SMAD7O15105 426 aaKnown RBP3.98□□□□□ -1.77
CCNL1-215ENST00000474539 GGCTO75223 188 aaKnown RBP3.98□□□□□ -1.77
CCNL1-215ENST00000474539 GPANK1O95872 356 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 AMBPP02760 352 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 MGST1P10620 155 aaKnown RBP3.98□□□□□ -1.77
CCNL1-215ENST00000474539 CRISP2P16562 243 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 GNLYP22749 145 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 LHX2P50458 406 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 LSAMPQ13449 338 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 GUCA2BQ16661 112 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 FAM74A3Q4VXF1 159 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 WDR73Q6P4I2 378 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 SPRED2Q7Z698 418 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 EIF4E3Q8N5X7 224 aaKnown RBP3.98□□□□□ -1.77
CCNL1-215ENST00000474539 C3orf56Q8N813 242 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 LINC01560Q8TB33 94 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 SSMEM1Q8WWF3 244 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 GATA6Q92908 595 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 RBM14Q96PK6 669 aaKnown RBP3.98□□□□□ -1.77
CCNL1-215ENST00000474539 P2RX4Q99571 388 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 SLC25A32Q9H2D1 315 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 MTCH1Q9NZJ7 389 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 RABAC1Q9UI14 185 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 ST6GALNAC2Q9UJ37 374 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 CBY1Q9Y3M2 126 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 TMEM56-RWDD3S4R434 201 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 SCN1AP35498 2009 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 IGKV1-8A0A0C4DH67 115 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 MOSP00540 346 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 F12P00748 615 aaPredicted RBP3.98□□□□□ -1.77
CCNL1-215ENST00000474539 PTHLHP12272 177 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 BCL3P20749 454 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 HRH1P35367 487 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 CLDN18P56856 261 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 ERVK11-1P61568 191 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 PRSS54Q6PEW0 395 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 NR2C2APQ86WQ0 139 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 IL17DQ8TAD2 202 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 YIPF5Q969M3 257 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 C1QTNF4Q9BXJ3 329 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 WDR13Q9H1Z4 485 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 RANGRFQ9HD47 186 aaPredicted RBP3.98□□□□□ -1.77
CCNL1-215ENST00000474539 ASCL3Q9NQ33 180 aa3.98□□□□□ -1.77
CCNL1-215ENST00000474539 METTL1Q9UBP6 276 aaKnown RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms