RNA–Protein interactions for RNA: ENST00000474256.1

CDPF1-205, Transcript of cysteine rich DPF motif domain containing 1, human

TSL 3

Gene CDPF1, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDPF1-205	ENST00000474256	RAB12	Q6IQ22	244 aa		12.5	□□□□□ -0.41
CDPF1-205	ENST00000474256	IZUMO1	Q8IYV9	350 aa		12.5	□□□□□ -0.41
CDPF1-205	ENST00000474256	TMEM104	Q8NE00	496 aa		12.5	□□□□□ -0.41
CDPF1-205	ENST00000474256	SGCD	Q92629	289 aa		12.5	□□□□□ -0.41
CDPF1-205	ENST00000474256	THRSP	Q92748	146 aa		12.5	□□□□□ -0.41
CDPF1-205	ENST00000474256	TFAP2C	Q92754	450 aa		12.5	□□□□□ -0.41
CDPF1-205	ENST00000474256	ST6GALNAC6	Q969X2	333 aa		12.5	□□□□□ -0.41
CDPF1-205	ENST00000474256	ETAA1	Q9NY74	926 aa		12.5	□□□□□ -0.41
CDPF1-205	ENST00000474256	IGHV3-43	A0A0B4J1X8	118 aa		12.49	□□□□□ -0.41
CDPF1-205	ENST00000474256	CA11	O75493	328 aa		12.49	□□□□□ -0.41
CDPF1-205	ENST00000474256	SC5D	O75845	299 aa		12.49	□□□□□ -0.41
CDPF1-205	ENST00000474256	IGHG2	P01859	326 aa		12.49	□□□□□ -0.41
CDPF1-205	ENST00000474256	PF4	P02776	101 aa		12.49	□□□□□ -0.41
CDPF1-205	ENST00000474256	GLA	P06280	429 aa		12.49	□□□□□ -0.41
CDPF1-205	ENST00000474256	IGHV3-43D	P0DP04	118 aa		12.49	□□□□□ -0.41
CDPF1-205	ENST00000474256	MGMT	P16455	207 aa		12.49	□□□□□ -0.41
CDPF1-205	ENST00000474256	MAPK3	P27361	379 aa	Predicted RBP	12.49	□□□□□ -0.41
CDPF1-205	ENST00000474256	TMEM30B	Q3MIR4	351 aa		12.49	□□□□□ -0.41
CDPF1-205	ENST00000474256	FOXB2	Q5VYV0	432 aa		12.49	□□□□□ -0.41
CDPF1-205	ENST00000474256	RNLS	Q5VYX0	342 aa		12.49	□□□□□ -0.41
CDPF1-205	ENST00000474256	MOB3B	Q86TA1	216 aa		12.49	□□□□□ -0.41
CDPF1-205	ENST00000474256	ZNF329	Q86UD4	541 aa		12.49	□□□□□ -0.41
CDPF1-205	ENST00000474256		Q8N6K4	173 aa		12.49	□□□□□ -0.41
CDPF1-205	ENST00000474256	NKAIN3	Q8N8D7	197 aa		12.49	□□□□□ -0.41
CDPF1-205	ENST00000474256	ZNF439	Q8NDP4	499 aa		12.49	□□□□□ -0.41
CDPF1-205	ENST00000474256	CHPT1	Q8WUD6	406 aa		12.49	□□□□□ -0.41
CDPF1-205	ENST00000474256	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	12.49	□□□□□ -0.41
CDPF1-205	ENST00000474256	EAF1	Q96JC9	268 aa	Predicted RBP	12.49	□□□□□ -0.41
CDPF1-205	ENST00000474256		Q96M66	194 aa		12.49	□□□□□ -0.41
CDPF1-205	ENST00000474256	NOL4L	Q96MY1	436 aa	Predicted RBP	12.49	□□□□□ -0.41
CDPF1-205	ENST00000474256	UQCC2	Q9BRT2	126 aa		12.49	□□□□□ -0.41
CDPF1-205	ENST00000474256	SELENOI	Q9C0D9	397 aa		12.49	□□□□□ -0.41
CDPF1-205	ENST00000474256	BANF2	Q9H503	90 aa		12.49	□□□□□ -0.41
CDPF1-205	ENST00000474256	RAB9B	Q9NP90	201 aa		12.49	□□□□□ -0.41
CDPF1-205	ENST00000474256	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	12.49	□□□□□ -0.41
CDPF1-205	ENST00000474256	TRAPPC2L	Q9UL33	140 aa		12.49	□□□□□ -0.41
CDPF1-205	ENST00000474256	ERGIC3	Q9Y282	383 aa		12.49	□□□□□ -0.41
CDPF1-205	ENST00000474256	PEX16	Q9Y5Y5	336 aa		12.49	□□□□□ -0.41
CDPF1-205	ENST00000474256	IGHV3-72	A0A0B4J1Y9	119 aa		12.48	□□□□□ -0.41
CDPF1-205	ENST00000474256	SLC31A2	O15432	143 aa		12.48	□□□□□ -0.41
CDPF1-205	ENST00000474256	SPINT2	O43291	252 aa		12.48	□□□□□ -0.41
CDPF1-205	ENST00000474256	FUT3	P21217	361 aa		12.48	□□□□□ -0.41
CDPF1-205	ENST00000474256	IL3RA	P26951	378 aa		12.48	□□□□□ -0.41
CDPF1-205	ENST00000474256	ZNF134	P52741	427 aa		12.48	□□□□□ -0.41
CDPF1-205	ENST00000474256	ZNF137P	P52743	207 aa		12.48	□□□□□ -0.41
CDPF1-205	ENST00000474256	SLC35A2	P78381	396 aa		12.48	□□□□□ -0.41
CDPF1-205	ENST00000474256	KHDC1L	Q5JSQ8	128 aa		12.48	□□□□□ -0.41
CDPF1-205	ENST00000474256	C6orf183	Q5T699	404 aa		12.48	□□□□□ -0.41
CDPF1-205	ENST00000474256	SIGIRR	Q6IA17	410 aa		12.48	□□□□□ -0.41
CDPF1-205	ENST00000474256	UNQ9370/PRO34162	Q6UXP9	181 aa		12.48	□□□□□ -0.41
CDPF1-205	ENST00000474256	SLC25A48	Q6ZT89	311 aa	Known RBP	12.48	□□□□□ -0.41
CDPF1-205	ENST00000474256	TGIF2LX	Q8IUE1	241 aa		12.48	□□□□□ -0.41
CDPF1-205	ENST00000474256	OR4K15	Q8NH41	348 aa		12.48	□□□□□ -0.41
CDPF1-205	ENST00000474256	GHRL	Q9UBU3	117 aa		12.48	□□□□□ -0.41
CDPF1-205	ENST00000474256	SERPINE3	A8MV23	424 aa		12.47	□□□□□ -0.41
CDPF1-205	ENST00000474256	CRTAP	O75718	401 aa	Predicted RBP	12.47	□□□□□ -0.41
CDPF1-205	ENST00000474256	HBZ	P02008	142 aa		12.47	□□□□□ -0.41
CDPF1-205	ENST00000474256	CDK1	P06493	297 aa		12.47	□□□□□ -0.41
CDPF1-205	ENST00000474256	RCC1	P18754	421 aa	Predicted RBP	12.47	□□□□□ -0.41
CDPF1-205	ENST00000474256	CD1B	P29016	333 aa		12.47	□□□□□ -0.41
CDPF1-205	ENST00000474256	VHL	P40337	213 aa		12.47	□□□□□ -0.41
CDPF1-205	ENST00000474256	GP2	P55259	537 aa	Known RBP	12.47	□□□□□ -0.41
CDPF1-205	ENST00000474256	INSL4	Q14641	139 aa		12.47	□□□□□ -0.41
CDPF1-205	ENST00000474256	STEAP3	Q658P3	488 aa		12.47	□□□□□ -0.41
CDPF1-205	ENST00000474256	TRAT1	Q6PIZ9	186 aa		12.47	□□□□□ -0.41
CDPF1-205	ENST00000474256	SLC35E3	Q7Z769	313 aa		12.47	□□□□□ -0.41
CDPF1-205	ENST00000474256	OR2T10	Q8NGZ9	312 aa		12.47	□□□□□ -0.41
CDPF1-205	ENST00000474256	OR1L1	Q8NH94	360 aa		12.47	□□□□□ -0.41
CDPF1-205	ENST00000474256	MRAP	Q8TCY5	172 aa		12.47	□□□□□ -0.41
CDPF1-205	ENST00000474256	RCC1L	Q96I51	464 aa	Known RBP	12.47	□□□□□ -0.41
CDPF1-205	ENST00000474256	CYYR1	Q96J86	154 aa		12.47	□□□□□ -0.41
CDPF1-205	ENST00000474256	PLSCR3	Q9NRY6	295 aa		12.47	□□□□□ -0.41
CDPF1-205	ENST00000474256	MBNL3	Q9NUK0	354 aa	Known RBP	12.47	□□□□□ -0.41
CDPF1-205	ENST00000474256	GNG12	Q9UBI6	72 aa		12.47	□□□□□ -0.41
CDPF1-205	ENST00000474256	LINC01548	A6NM66	108 aa		12.46	□□□□□ -0.41
CDPF1-205	ENST00000474256	TXNL1	O43396	289 aa		12.46	□□□□□ -0.41
CDPF1-205	ENST00000474256	DUS4L	O95620	317 aa	Known RBP	12.46	□□□□□ -0.41
CDPF1-205	ENST00000474256	RPL23A	P62750	156 aa	Known RBP	12.46	□□□□□ -0.41
CDPF1-205	ENST00000474256	GPR50	Q13585	617 aa		12.46	□□□□□ -0.41
CDPF1-205	ENST00000474256	ACSM3	Q53FZ2	586 aa		12.46	□□□□□ -0.41
CDPF1-205	ENST00000474256	CT45A1	Q5HYN5	189 aa		12.46	□□□□□ -0.41
CDPF1-205	ENST00000474256	ZNF554	Q86TJ5	538 aa		12.46	□□□□□ -0.41
CDPF1-205	ENST00000474256	STPG2	Q8N412	459 aa		12.46	□□□□□ -0.41
CDPF1-205	ENST00000474256	MS4A15	Q8N5U1	240 aa		12.46	□□□□□ -0.41
CDPF1-205	ENST00000474256	LINC00482	Q8N8I6	264 aa		12.46	□□□□□ -0.41
CDPF1-205	ENST00000474256		Q8N9W7	124 aa		12.46	□□□□□ -0.41
CDPF1-205	ENST00000474256	CT45A3	Q8NHU0	189 aa		12.46	□□□□□ -0.41
CDPF1-205	ENST00000474256	ABCG5	Q9H222	651 aa		12.46	□□□□□ -0.41
CDPF1-205	ENST00000474256	VCX	Q9H320	206 aa		12.46	□□□□□ -0.41
CDPF1-205	ENST00000474256	LIN7C	Q9NUP9	197 aa	Known RBP	12.46	□□□□□ -0.41
CDPF1-205	ENST00000474256	LINC00527	Q9UJ94	153 aa		12.46	□□□□□ -0.41
CDPF1-205	ENST00000474256	UBE2QL1	A1L167	161 aa		12.45	□□□□□ -0.42
CDPF1-205	ENST00000474256	NCBP2L	A6PVI3	153 aa	Known RBP	12.45	□□□□□ -0.42
CDPF1-205	ENST00000474256	ZNF736	B4DX44	427 aa	Predicted RBP	12.45	□□□□□ -0.42
CDPF1-205	ENST00000474256	PDCD6	O75340	191 aa		12.45	□□□□□ -0.42
CDPF1-205	ENST00000474256	MOS	P00540	346 aa		12.45	□□□□□ -0.42
CDPF1-205	ENST00000474256	GPR12	P47775	334 aa		12.45	□□□□□ -0.42
CDPF1-205	ENST00000474256	SLC35B1	P78383	322 aa		12.45	□□□□□ -0.42
CDPF1-205	ENST00000474256	C6orf141	Q5SZD1	244 aa		12.45	□□□□□ -0.42
CDPF1-205	ENST00000474256	ETV3L	Q6ZN32	361 aa		12.45	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms