RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 KIR2DS1A0A191URI9 304 aa18.01■□□□□ 0.47
COL18A1-207ENST00000473212 MRPL33O75394 65 aaKnown RBP18.01■□□□□ 0.47
COL18A1-207ENST00000473212 HBE1P02100 147 aa18.01■□□□□ 0.47
COL18A1-207ENST00000473212 S100A2P29034 98 aa18.01■□□□□ 0.47
COL18A1-207ENST00000473212 KIR2DS4P43632 304 aa18.01■□□□□ 0.47
COL18A1-207ENST00000473212 KIR2DS1Q14954 304 aa18.01■□□□□ 0.47
COL18A1-207ENST00000473212 C3AR1Q16581 482 aa18.01■□□□□ 0.47
COL18A1-207ENST00000473212 OR2B11Q5JQS5 317 aa18.01■□□□□ 0.47
COL18A1-207ENST00000473212 SLC25A24Q6NUK1 477 aa18.01■□□□□ 0.47
COL18A1-207ENST00000473212 CDPF1Q6NVV7 123 aa18.01■□□□□ 0.47
COL18A1-207ENST00000473212 REPIN1Q9BWE0 567 aaKnown RBP18.01■□□□□ 0.47
COL18A1-207ENST00000473212 HIST1H2BKO60814 126 aa18.01■□□□□ 0.47
COL18A1-207ENST00000473212 HIST1H2BJP06899 126 aa18.01■□□□□ 0.47
COL18A1-207ENST00000473212 HIST1H2BOP23527 126 aa18.01■□□□□ 0.47
COL18A1-207ENST00000473212 HIST1H2BBP33778 126 aa18.01■□□□□ 0.47
COL18A1-207ENST00000473212 HIST1H2BDP58876 126 aa18.01■□□□□ 0.47
COL18A1-207ENST00000473212 HIST1H2BCP62807 126 aa18.01■□□□□ 0.47
COL18A1-207ENST00000473212 HIST2H2BEQ16778 126 aa18.01■□□□□ 0.47
COL18A1-207ENST00000473212 KHDC3LQ587J8 217 aa18.01■□□□□ 0.47
COL18A1-207ENST00000473212 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.01■□□□□ 0.47
COL18A1-207ENST00000473212 VASH2Q86V25 355 aa18.01■□□□□ 0.47
COL18A1-207ENST00000473212 STX12Q86Y82 276 aa18.01■□□□□ 0.47
COL18A1-207ENST00000473212 OR51H1Q8NH63 302 aa18.01■□□□□ 0.47
COL18A1-207ENST00000473212 CT55Q8WUE5 264 aa18.01■□□□□ 0.47
COL18A1-207ENST00000473212 HIST1H2BHQ93079 126 aa18.01■□□□□ 0.47
COL18A1-207ENST00000473212 HIST1H2BNQ99877 126 aa18.01■□□□□ 0.47
COL18A1-207ENST00000473212 HIST1H2BMQ99879 126 aa18.01■□□□□ 0.47
COL18A1-207ENST00000473212 GAR1Q9NY12 217 aaKnown RBP18.01■□□□□ 0.47
COL18A1-207ENST00000473212 CYB561P49447 251 aa18■□□□□ 0.47
COL18A1-207ENST00000473212 ZXDAP98168 799 aa18■□□□□ 0.47
COL18A1-207ENST00000473212 SLC35E3Q7Z769 313 aa18■□□□□ 0.47
COL18A1-207ENST00000473212 ZNF295-AS1Q8N0V1 137 aa18■□□□□ 0.47
COL18A1-207ENST00000473212 UBALD1Q8TB05 177 aa18■□□□□ 0.47
COL18A1-207ENST00000473212 GPR146Q96CH1 333 aa18■□□□□ 0.47
COL18A1-207ENST00000473212 SIRT7Q9NRC8 400 aa18■□□□□ 0.47
COL18A1-207ENST00000473212 DMRT1Q9Y5R6 373 aa18■□□□□ 0.47
COL18A1-207ENST00000473212 ZFHX4Q86UP3 3567 aa18■□□□□ 0.47
COL18A1-207ENST00000473212 LOC102723971A0A1B0GUV8 181 aa18■□□□□ 0.47
COL18A1-207ENST00000473212 CXorf65A6NEN9 183 aa18■□□□□ 0.47
COL18A1-207ENST00000473212 ARGFXA6NJG6 315 aa18■□□□□ 0.47
COL18A1-207ENST00000473212 FAM166BA8MTA8 275 aa18■□□□□ 0.47
COL18A1-207ENST00000473212 TRAPPC2LH3BP13 241 aa18■□□□□ 0.47
COL18A1-207ENST00000473212 HS3ST1O14792 307 aa18■□□□□ 0.47
COL18A1-207ENST00000473212 TRGC2P03986 189 aa18■□□□□ 0.47
COL18A1-207ENST00000473212 F2RP25116 425 aa18■□□□□ 0.47
COL18A1-207ENST00000473212 TCEAL6Q6IPX3 200 aa18■□□□□ 0.47
COL18A1-207ENST00000473212 ZDHHC23Q8IYP9 409 aa18■□□□□ 0.47
COL18A1-207ENST00000473212 RDH5Q92781 318 aa18■□□□□ 0.47
COL18A1-207ENST00000473212 JMJD7P0C870 316 aa17.99■□□□□ 0.47
COL18A1-207ENST00000473212 PLA2G5P39877 138 aa17.99■□□□□ 0.47
COL18A1-207ENST00000473212 RAB11AP62491 216 aa17.99■□□□□ 0.47
COL18A1-207ENST00000473212 HLA-DRB3P79483 266 aa17.99■□□□□ 0.47
COL18A1-207ENST00000473212 C9orf152Q5JTZ5 239 aa17.99■□□□□ 0.47
COL18A1-207ENST00000473212 PCSK4Q6UW60 755 aa17.99■□□□□ 0.47
COL18A1-207ENST00000473212 DPPA3Q6W0C5 159 aa17.99■□□□□ 0.47
COL18A1-207ENST00000473212 RSG1Q9BU20 258 aa17.99■□□□□ 0.47
COL18A1-207ENST00000473212 IFNA5P01569 189 aa17.99■□□□□ 0.47
COL18A1-207ENST00000473212 CTXN2P0C2S0 81 aa17.99■□□□□ 0.47
COL18A1-207ENST00000473212 MPV17LQ2QL34 196 aa17.99■□□□□ 0.47
COL18A1-207ENST00000473212 CEACAM21Q3KPI0 293 aa17.99■□□□□ 0.47
COL18A1-207ENST00000473212 GFI1BQ5VTD9 330 aa17.99■□□□□ 0.47
COL18A1-207ENST00000473212 MRPL21Q7Z2W9 205 aaKnown RBP17.99■□□□□ 0.47
COL18A1-207ENST00000473212 IL22RA2Q969J5 263 aa17.99■□□□□ 0.47
COL18A1-207ENST00000473212 LRFN1Q9P244 771 aa17.99■□□□□ 0.47
COL18A1-207ENST00000473212 GTF3C1Q12789 2109 aa17.98■□□□□ 0.47
COL18A1-207ENST00000473212 ZFP92A6NM28 416 aa17.98■□□□□ 0.47
COL18A1-207ENST00000473212 DFFBO76075 338 aa17.98■□□□□ 0.47
COL18A1-207ENST00000473212 PSG2P11465 335 aa17.98■□□□□ 0.47
COL18A1-207ENST00000473212 CD200P41217 278 aa17.98■□□□□ 0.47
COL18A1-207ENST00000473212 OR8G1Q15617 311 aa17.98■□□□□ 0.47
COL18A1-207ENST00000473212 PDZD11Q5EBL8 140 aa17.98■□□□□ 0.47
COL18A1-207ENST00000473212 MKXQ8IYA7 352 aa17.98■□□□□ 0.47
COL18A1-207ENST00000473212 SAXO1Q8IYX7 474 aa17.98■□□□□ 0.47
COL18A1-207ENST00000473212 MRPL30Q8TCC3 161 aaKnown RBP17.98■□□□□ 0.47
COL18A1-207ENST00000473212 THOC3Q96J01 351 aaKnown RBP17.98■□□□□ 0.47
COL18A1-207ENST00000473212 VSIRQ9H7M9 311 aa17.98■□□□□ 0.47
COL18A1-207ENST00000473212 IGHV3-64DA0A0J9YX35 117 aa17.97■□□□□ 0.47
COL18A1-207ENST00000473212 SERPINE2P07093 398 aa17.97■□□□□ 0.47
COL18A1-207ENST00000473212 Q6ZRM9 215 aa17.97■□□□□ 0.47
COL18A1-207ENST00000473212 OR10D4PQ8NGN7 298 aa17.97■□□□□ 0.47
COL18A1-207ENST00000473212 RNASE11Q8TAA1 199 aaKnown RBP17.97■□□□□ 0.47
COL18A1-207ENST00000473212 HIPK2Q9H2X6 1198 aa17.97■□□□□ 0.47
COL18A1-207ENST00000473212 RPRMQ9NS64 109 aa17.97■□□□□ 0.47
COL18A1-207ENST00000473212 PLA2G3Q9NZ20 509 aa17.97■□□□□ 0.47
COL18A1-207ENST00000473212 KIAA1324LA8MWY0 1029 aaPredicted RBP17.97■□□□□ 0.47
COL18A1-207ENST00000473212 TRA2AQ13595 282 aaKnown RBP eCLIP17.97■□□□□ 0.47
COL18A1-207ENST00000473212 FAM90A2PQ658T7 463 aa17.97■□□□□ 0.47
COL18A1-207ENST00000473212 LCN15Q6UWW0 184 aa17.97■□□□□ 0.47
COL18A1-207ENST00000473212 ZNF383Q8NA42 475 aa17.97■□□□□ 0.47
COL18A1-207ENST00000473212 ZNF665Q9H7R5 613 aa17.97■□□□□ 0.47
COL18A1-207ENST00000473212 ERRFI1Q9UJM3 462 aaPredicted RBP17.97■□□□□ 0.47
COL18A1-207ENST00000473212 PRR14LQ5THK1 2151 aa17.96■□□□□ 0.47
COL18A1-207ENST00000473212 ZNF324BQ6AW86 544 aaPredicted RBP17.96■□□□□ 0.47
COL18A1-207ENST00000473212 PFDN5Q99471 154 aa17.96■□□□□ 0.47
COL18A1-207ENST00000473212 OR2W1Q9Y3N9 320 aa17.96■□□□□ 0.47
COL18A1-207ENST00000473212 TRAV1-1A0A0B4J248 108 aa17.96■□□□□ 0.47
COL18A1-207ENST00000473212 SOD3P08294 240 aa17.96■□□□□ 0.47
COL18A1-207ENST00000473212 IAPPP10997 89 aa17.96■□□□□ 0.47
COL18A1-207ENST00000473212 MAGEA5P43359 124 aa17.96■□□□□ 0.47
COL18A1-207ENST00000473212 LHX2P50458 406 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms