RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 CEACAM1P13688 526 aa9□□□□□ -0.97
APLF-204ENST00000471727 GCH1P30793 250 aa9□□□□□ -0.97
APLF-204ENST00000471727 SRSF3P84103 164 aaKnown RBP9□□□□□ -0.97
APLF-204ENST00000471727 GUCA2BQ16661 112 aa9□□□□□ -0.97
APLF-204ENST00000471727 DPPA3Q6W0C5 159 aa9□□□□□ -0.97
APLF-204ENST00000471727 BEND4Q6ZU67 534 aa9□□□□□ -0.97
APLF-204ENST00000471727 PLPPR1Q8TBJ4 325 aa9□□□□□ -0.97
APLF-204ENST00000471727 FAM216AQ8WUB2 273 aa9□□□□□ -0.97
APLF-204ENST00000471727 BSCL2Q96G97 398 aaPredicted RBP9□□□□□ -0.97
APLF-204ENST00000471727 HIPK2Q9H2X6 1198 aa9□□□□□ -0.97
APLF-204ENST00000471727 SEBOXQ9HB31 216 aaPredicted RBP9□□□□□ -0.97
APLF-204ENST00000471727 PROCRQ9UNN8 238 aa9□□□□□ -0.97
APLF-204ENST00000471727 RBM7Q9Y580 266 aaKnown RBP9□□□□□ -0.97
APLF-204ENST00000471727 MED13Q9UHV7 2174 aa9□□□□□ -0.97
APLF-204ENST00000471727 ZNF407Q9C0G0 2248 aa8.99□□□□□ -0.97
APLF-204ENST00000471727 A0A1B0GWJ7 208 aa8.99□□□□□ -0.97
APLF-204ENST00000471727 IGSF23A1L1A6 192 aa8.99□□□□□ -0.97
APLF-204ENST00000471727 OOEPA6NGQ2 149 aa8.99□□□□□ -0.97
APLF-204ENST00000471727 PCNX2A6NKB5 2137 aa8.99□□□□□ -0.97
APLF-204ENST00000471727 C1QTNF9BB2RNN3 333 aa8.99□□□□□ -0.97
APLF-204ENST00000471727 FAM90A26D6RGX4 464 aa8.99□□□□□ -0.97
APLF-204ENST00000471727 H7C2Y5 167 aa8.99□□□□□ -0.97
APLF-204ENST00000471727 CHST1O43916 411 aa8.99□□□□□ -0.97
APLF-204ENST00000471727 SSSCA1O60232 199 aa8.99□□□□□ -0.97
APLF-204ENST00000471727 WDR1O75083 606 aa8.99□□□□□ -0.97
APLF-204ENST00000471727 IGLV1-44P01699 117 aa8.99□□□□□ -0.97
APLF-204ENST00000471727 SFTA3P0C7M3 94 aa8.99□□□□□ -0.97
APLF-204ENST00000471727 CD80P33681 288 aa8.99□□□□□ -0.97
APLF-204ENST00000471727 ARHGDIBP52566 201 aa8.99□□□□□ -0.97
APLF-204ENST00000471727 TAS2R30P59541 319 aa8.99□□□□□ -0.97
APLF-204ENST00000471727 FLI1Q01543 452 aaPredicted RBP8.99□□□□□ -0.97
APLF-204ENST00000471727 TESK1Q15569 626 aa8.99□□□□□ -0.97
APLF-204ENST00000471727 GUK1Q16774 197 aa8.99□□□□□ -0.97
APLF-204ENST00000471727 C3orf36Q3SXR2 165 aa8.99□□□□□ -0.97
APLF-204ENST00000471727 ACSF3Q4G176 576 aaPredicted RBP8.99□□□□□ -0.97
APLF-204ENST00000471727 MIDNQ504T8 468 aa8.99□□□□□ -0.97
APLF-204ENST00000471727 CXorf66Q5JRM2 361 aaPredicted RBP8.99□□□□□ -0.97
APLF-204ENST00000471727 MBNL2Q5VZF2 373 aaKnown RBP8.99□□□□□ -0.97
APLF-204ENST00000471727 TRAT1Q6PIZ9 186 aa8.99□□□□□ -0.97
APLF-204ENST00000471727 IGFL3Q6UXB1 125 aa8.99□□□□□ -0.97
APLF-204ENST00000471727 MYPOPQ86VE0 399 aaPredicted RBP8.99□□□□□ -0.97
APLF-204ENST00000471727 STX12Q86Y82 276 aa8.99□□□□□ -0.97
APLF-204ENST00000471727 GCNT2Q8N0V5 402 aa8.99□□□□□ -0.97
APLF-204ENST00000471727 C9orf106Q8NAJ2 232 aa8.99□□□□□ -0.97
APLF-204ENST00000471727 RNASE11Q8TAA1 199 aaKnown RBP8.99□□□□□ -0.97
APLF-204ENST00000471727 IL1F10Q8WWZ1 152 aa8.99□□□□□ -0.97
APLF-204ENST00000471727 GPR146Q96CH1 333 aa8.99□□□□□ -0.97
APLF-204ENST00000471727 AIFM2Q9BRQ8 373 aa8.99□□□□□ -0.97
APLF-204ENST00000471727 WSB1Q9Y6I7 421 aa8.99□□□□□ -0.97
APLF-204ENST00000471727 SHANK1Q9Y566 2161 aa8.99□□□□□ -0.97
APLF-204ENST00000471727 ARHGAP21Q5T5U3 1957 aa8.99□□□□□ -0.97
APLF-204ENST00000471727 FAM74A7A6NL05 159 aa8.98□□□□□ -0.97
APLF-204ENST00000471727 PROB1E7EW31 1015 aa8.98□□□□□ -0.97
APLF-204ENST00000471727 K7N7A8 449 aa8.98□□□□□ -0.97
APLF-204ENST00000471727 NUPL2O15504 423 aaKnown RBP8.98□□□□□ -0.97
APLF-204ENST00000471727 GRPP07492 148 aa8.98□□□□□ -0.97
APLF-204ENST00000471727 OR8U9P0C7N5 309 aa8.98□□□□□ -0.97
APLF-204ENST00000471727 CTRB1P17538 263 aa8.98□□□□□ -0.97
APLF-204ENST00000471727 RAB2AP61019 212 aa8.98□□□□□ -0.97
APLF-204ENST00000471727 PAX5Q02548 391 aa8.98□□□□□ -0.97
APLF-204ENST00000471727 ZNF616Q08AN1 781 aa8.98□□□□□ -0.97
APLF-204ENST00000471727 DEFB109BQ30KR1 87 aa8.98□□□□□ -0.97
APLF-204ENST00000471727 FAM74A3Q4VXF1 159 aa8.98□□□□□ -0.97
APLF-204ENST00000471727 CTRB2Q6GPI1 263 aa8.98□□□□□ -0.97
APLF-204ENST00000471727 HSD17B11Q8NBQ5 300 aa8.98□□□□□ -0.97
APLF-204ENST00000471727 OR2G3Q8NGZ4 309 aa8.98□□□□□ -0.97
APLF-204ENST00000471727 GALMQ96C23 342 aa8.98□□□□□ -0.97
APLF-204ENST00000471727 TMEM231Q9H6L2 316 aa8.98□□□□□ -0.97
APLF-204ENST00000471727 COA4Q9NYJ1 87 aa8.98□□□□□ -0.97
APLF-204ENST00000471727 FAM96BQ9Y3D0 163 aa8.98□□□□□ -0.97
APLF-204ENST00000471727 RNF115Q9Y4L5 304 aa8.98□□□□□ -0.97
APLF-204ENST00000471727 DNAJC13O75165 2243 aa8.98□□□□□ -0.97
APLF-204ENST00000471727 A0A1W2PR80 420 aa8.98□□□□□ -0.97
APLF-204ENST00000471727 MBD3L4A6NDZ8 208 aaPredicted RBP8.98□□□□□ -0.97
APLF-204ENST00000471727 MBD3L3A6NE82 208 aaPredicted RBP8.98□□□□□ -0.97
APLF-204ENST00000471727 MBD3L5A6NJ08 208 aaPredicted RBP8.98□□□□□ -0.97
APLF-204ENST00000471727 FAM157AC9JC47 383 aa8.98□□□□□ -0.97
APLF-204ENST00000471727 TNFSF12O43508 249 aa8.98□□□□□ -0.97
APLF-204ENST00000471727 TIMM8AO60220 97 aaPredicted RBP8.98□□□□□ -0.97
APLF-204ENST00000471727 IFNA5P01569 189 aa8.98□□□□□ -0.97
APLF-204ENST00000471727 PSG2P11465 335 aa8.98□□□□□ -0.97
APLF-204ENST00000471727 ATP6V0CP27449 155 aa8.98□□□□□ -0.97
APLF-204ENST00000471727 MPV17P39210 176 aa8.98□□□□□ -0.97
APLF-204ENST00000471727 CEACAM6P40199 344 aa8.98□□□□□ -0.97
APLF-204ENST00000471727 SULT1A1P50225 295 aa8.98□□□□□ -0.97
APLF-204ENST00000471727 NOVA1P51513 510 aaKnown RBP8.98□□□□□ -0.97
APLF-204ENST00000471727 IGFBP7Q16270 282 aa8.98□□□□□ -0.97
APLF-204ENST00000471727 VWA1Q6PCB0 445 aa8.98□□□□□ -0.97
APLF-204ENST00000471727 CLEC9AQ6UXN8 241 aa8.98□□□□□ -0.97
APLF-204ENST00000471727 C5orf24Q7Z6I8 188 aa8.98□□□□□ -0.97
APLF-204ENST00000471727 FAM90A1Q86YD7 464 aa8.98□□□□□ -0.97
APLF-204ENST00000471727 ZNF645Q8N7E2 425 aa8.98□□□□□ -0.97
APLF-204ENST00000471727 OR5C1Q8NGR4 320 aa8.98□□□□□ -0.97
APLF-204ENST00000471727 OR10Z1Q8NGY1 313 aa8.98□□□□□ -0.97
APLF-204ENST00000471727 OR8U1Q8NH10 309 aa8.98□□□□□ -0.97
APLF-204ENST00000471727 MBD3L2Q8NHZ7 208 aaPredicted RBP8.98□□□□□ -0.97
APLF-204ENST00000471727 LURAP1Q96LR2 239 aa8.98□□□□□ -0.97
APLF-204ENST00000471727 ATP5SQ99766 215 aa8.98□□□□□ -0.97
APLF-204ENST00000471727 UNKLQ9H9P5 680 aaKnown RBP8.98□□□□□ -0.97
APLF-204ENST00000471727 ZNF71Q9NQZ8 489 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms