RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 UPK1BO75841 260 aa8.07□□□□□ -1.12
SF3A1-207ENST00000471342 ZNF728P0DKX0 622 aa8.07□□□□□ -1.12
SF3A1-207ENST00000471342 NDUFB7P17568 137 aa8.07□□□□□ -1.12
SF3A1-207ENST00000471342 GZMHP20718 246 aa8.07□□□□□ -1.12
SF3A1-207ENST00000471342 OMGP23515 440 aa8.07□□□□□ -1.12
SF3A1-207ENST00000471342 CD34P28906 385 aa8.07□□□□□ -1.12
SF3A1-207ENST00000471342 S100A5P33763 92 aa8.07□□□□□ -1.12
SF3A1-207ENST00000471342 EDDM3BP56851 147 aa8.07□□□□□ -1.12
SF3A1-207ENST00000471342 HLA-DRB3P79483 266 aa8.07□□□□□ -1.12
SF3A1-207ENST00000471342 MRPS10P82664 201 aaKnown RBP8.07□□□□□ -1.12
SF3A1-207ENST00000471342 PITPNAQ00169 270 aa8.07□□□□□ -1.12
SF3A1-207ENST00000471342 ZNF846Q147U1 533 aa8.07□□□□□ -1.12
SF3A1-207ENST00000471342 ARL6IP1Q15041 203 aa8.07□□□□□ -1.12
SF3A1-207ENST00000471342 FBLN7Q53RD9 439 aa8.07□□□□□ -1.12
SF3A1-207ENST00000471342 LRRC10Q5BKY1 277 aa8.07□□□□□ -1.12
SF3A1-207ENST00000471342 CT45A1Q5HYN5 189 aa8.07□□□□□ -1.12
SF3A1-207ENST00000471342 LY6G6FQ5SQ64 297 aa8.07□□□□□ -1.12
SF3A1-207ENST00000471342 VAX1Q5SQQ9 334 aa8.07□□□□□ -1.12
SF3A1-207ENST00000471342 FIP1L1Q6UN15 594 aaKnown RBP8.07□□□□□ -1.12
SF3A1-207ENST00000471342 HEPN1Q6WQI6 88 aa8.07□□□□□ -1.12
SF3A1-207ENST00000471342 C1orf122Q6ZSJ8 110 aa8.07□□□□□ -1.12
SF3A1-207ENST00000471342 H1FOOQ8IZA3 346 aaPredicted RBP8.07□□□□□ -1.12
SF3A1-207ENST00000471342 BEST4Q8NFU0 473 aa8.07□□□□□ -1.12
SF3A1-207ENST00000471342 CT45A3Q8NHU0 189 aa8.07□□□□□ -1.12
SF3A1-207ENST00000471342 S100ZQ8WXG8 99 aa8.07□□□□□ -1.12
SF3A1-207ENST00000471342 RBMXL1Q96E39 390 aaKnown RBP8.07□□□□□ -1.12
SF3A1-207ENST00000471342 ZNF251Q9BRH9 671 aa8.07□□□□□ -1.12
SF3A1-207ENST00000471342 RIMS4Q9H426 269 aaPredicted RBP8.07□□□□□ -1.12
SF3A1-207ENST00000471342 HRASLSQ9HDD0 168 aa8.07□□□□□ -1.12
SF3A1-207ENST00000471342 RABL2AQ9UBK7 228 aaPredicted RBP8.07□□□□□ -1.12
SF3A1-207ENST00000471342 GLS2Q9UI32 602 aa8.07□□□□□ -1.12
SF3A1-207ENST00000471342 RABL2BQ9UNT1 228 aa8.07□□□□□ -1.12
SF3A1-207ENST00000471342 SOX21Q9Y651 276 aaPredicted RBP8.07□□□□□ -1.12
SF3A1-207ENST00000471342 CREBBPQ92793 2442 aa8.07□□□□□ -1.12
SF3A1-207ENST00000471342 IGKV1D-13A0A0B4J2D9 117 aa8.06□□□□□ -1.12
SF3A1-207ENST00000471342 ZNF729A6NN14 1252 aaPredicted RBP8.06□□□□□ -1.12
SF3A1-207ENST00000471342 RNASEK-C17orf49H0YIS7 233 aa8.06□□□□□ -1.12
SF3A1-207ENST00000471342 H3BUI4 141 aa8.06□□□□□ -1.12
SF3A1-207ENST00000471342 ECDO95905 644 aaPredicted RBP8.06□□□□□ -1.12
SF3A1-207ENST00000471342 IGLV1-47P01700 117 aa8.06□□□□□ -1.12
SF3A1-207ENST00000471342 MSMBP08118 114 aa8.06□□□□□ -1.12
SF3A1-207ENST00000471342 PPIAL4GP0DN37 164 aa8.06□□□□□ -1.12
SF3A1-207ENST00000471342 IGHV1-8P0DP01 117 aa8.06□□□□□ -1.12
SF3A1-207ENST00000471342 IGKV1-13P0DP09 117 aa8.06□□□□□ -1.12
SF3A1-207ENST00000471342 RCVRNP35243 200 aa8.06□□□□□ -1.12
SF3A1-207ENST00000471342 BRWD1-AS2P59051 145 aa8.06□□□□□ -1.12
SF3A1-207ENST00000471342 GNG2P59768 71 aa8.06□□□□□ -1.12
SF3A1-207ENST00000471342 GNB2P62879 340 aa8.06□□□□□ -1.12
SF3A1-207ENST00000471342 HTD2P86397 168 aa8.06□□□□□ -1.12
SF3A1-207ENST00000471342 SSBP1Q04837 148 aaKnown RBP8.06□□□□□ -1.12
SF3A1-207ENST00000471342 DYRK1AQ13627 763 aa8.06□□□□□ -1.12
SF3A1-207ENST00000471342 ARFRP1Q13795 201 aa8.06□□□□□ -1.12
SF3A1-207ENST00000471342 MORN2Q502X0 79 aa8.06□□□□□ -1.12
SF3A1-207ENST00000471342 PYDC2Q56P42 97 aa8.06□□□□□ -1.12
SF3A1-207ENST00000471342 SPANXN2Q5MJ10 180 aa8.06□□□□□ -1.12
SF3A1-207ENST00000471342 PRAMEF5Q5TYX0 476 aa8.06□□□□□ -1.12
SF3A1-207ENST00000471342 GDPD3Q7L5L3 318 aa8.06□□□□□ -1.12
SF3A1-207ENST00000471342 GLCCI1Q86VQ1 547 aa8.06□□□□□ -1.12
SF3A1-207ENST00000471342 KIR3DL3Q8N743 410 aa8.06□□□□□ -1.12
SF3A1-207ENST00000471342 OR5AP2Q8NGF4 316 aa8.06□□□□□ -1.12
SF3A1-207ENST00000471342 OR4C16Q8NGL9 310 aa8.06□□□□□ -1.12
SF3A1-207ENST00000471342 FCAMRQ8WWV6 532 aa8.06□□□□□ -1.12
SF3A1-207ENST00000471342 ST6GALNAC6Q969X2 333 aa8.06□□□□□ -1.12
SF3A1-207ENST00000471342 SMR3AQ99954 134 aa8.06□□□□□ -1.12
SF3A1-207ENST00000471342 CCDC32Q9BV29 185 aa8.06□□□□□ -1.12
SF3A1-207ENST00000471342 C11orf54Q9H0W9 315 aaPredicted RBP8.06□□□□□ -1.12
SF3A1-207ENST00000471342 ZNF286AQ9HBT8 521 aa8.06□□□□□ -1.12
SF3A1-207ENST00000471342 GFOD1Q9NXC2 390 aa8.06□□□□□ -1.12
SF3A1-207ENST00000471342 FLNAP21333 2647 aaKnown RBP8.06□□□□□ -1.12
SF3A1-207ENST00000471342 hADV38S2A0JD32 116 aa8.05□□□□□ -1.12
SF3A1-207ENST00000471342 OR5H14A6NHG9 310 aa8.05□□□□□ -1.12
SF3A1-207ENST00000471342 ODF3BA8MYP8 253 aa8.05□□□□□ -1.12
SF3A1-207ENST00000471342 M0QYG6 137 aa8.05□□□□□ -1.12
SF3A1-207ENST00000471342 M0R1W7 72 aa8.05□□□□□ -1.12
SF3A1-207ENST00000471342 SDCBPO00560 298 aaPredicted RBP8.05□□□□□ -1.12
SF3A1-207ENST00000471342 RBBP9O75884 186 aa8.05□□□□□ -1.12
SF3A1-207ENST00000471342 DIRAS3O95661 229 aa8.05□□□□□ -1.12
SF3A1-207ENST00000471342 PMP2P02689 132 aa8.05□□□□□ -1.12
SF3A1-207ENST00000471342 SPNP16150 400 aa8.05□□□□□ -1.12
SF3A1-207ENST00000471342 PRTN3P24158 256 aa8.05□□□□□ -1.12
SF3A1-207ENST00000471342 HLA-DMAP28067 261 aa8.05□□□□□ -1.12
SF3A1-207ENST00000471342 HRH1P35367 487 aa8.05□□□□□ -1.12
SF3A1-207ENST00000471342 TALDO1P37837 337 aa8.05□□□□□ -1.12
SF3A1-207ENST00000471342 ARF6P62330 175 aa8.05□□□□□ -1.12
SF3A1-207ENST00000471342 DIAPH2-AS1Q14236 149 aa8.05□□□□□ -1.12
SF3A1-207ENST00000471342 PLA1AQ53H76 456 aa8.05□□□□□ -1.12
SF3A1-207ENST00000471342 ESCO2Q56NI9 601 aa8.05□□□□□ -1.12
SF3A1-207ENST00000471342 PNKDQ8N490 385 aa8.05□□□□□ -1.12
SF3A1-207ENST00000471342 OR52M1Q8NGK5 317 aa8.05□□□□□ -1.12
SF3A1-207ENST00000471342 OR4A4PQ8NGN8 299 aa8.05□□□□□ -1.12
SF3A1-207ENST00000471342 OR56B4Q8NH76 319 aa8.05□□□□□ -1.12
SF3A1-207ENST00000471342 PPP1R35Q8TAP8 253 aa8.05□□□□□ -1.12
SF3A1-207ENST00000471342 C17orf50Q8WW18 174 aa8.05□□□□□ -1.12
SF3A1-207ENST00000471342 GIMAP1Q8WWP7 306 aa8.05□□□□□ -1.12
SF3A1-207ENST00000471342 LEAP2Q969E1 77 aa8.05□□□□□ -1.12
SF3A1-207ENST00000471342 ARL11Q969Q4 196 aa8.05□□□□□ -1.12
SF3A1-207ENST00000471342 TSC22D3Q99576 134 aa8.05□□□□□ -1.12
SF3A1-207ENST00000471342 WDR12Q9GZL7 423 aaKnown RBP8.05□□□□□ -1.12
SF3A1-207ENST00000471342 IFI27L2Q9H2X8 130 aa8.05□□□□□ -1.12
SF3A1-207ENST00000471342 LPAR2Q9HBW0 351 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms