RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 RAB40BQ12829 278 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 PSG7Q13046 419 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 GK2Q14410 553 aaPredicted RBP3.03□□□□□ -1.92
COL9A1-206ENST00000470652 KRTAP13-3Q3SY46 172 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 SLC36A2Q495M3 483 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 KCTD21Q4G0X4 260 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 TEX30Q5JUR7 227 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 RBM48Q5RL73 367 aaKnown RBP3.03□□□□□ -1.92
COL9A1-206ENST00000470652 FAM201AQ5SY85 155 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 NCMAPQ5T1S8 102 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 BCL2L15Q5TBC7 163 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 RSBN1Q5VWQ0 802 aaPredicted RBP3.03□□□□□ -1.92
COL9A1-206ENST00000470652 PRAMEF6Q5VXH4 476 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 TMEM53Q6P2H8 277 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 XKRXQ6PP77 449 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 TMEM91Q6ZNR0 172 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 Q6ZR03 302 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 HDDC2Q7Z4H3 204 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 WDR86Q86TI4 376 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 ZNF679Q8IYX0 411 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 UXS1Q8NBZ7 420 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 KLHL30-AS1Q8NEE0 82 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 STEAP2Q8NFT2 490 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 OR10AD1Q8NGE0 317 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 OR56B2PQ8NGI1 322 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 OR2G2Q8NGZ5 317 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 OR2T27Q8NH04 317 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 CMBLQ96DG6 245 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 SEH1LQ96EE3 360 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 REEP6Q96HR9 211 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 PGLYRP3Q96LB9 341 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 ZNF488Q96MN9 340 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 Q96MT0 163 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 COQ7Q99807 217 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 KCNS3Q9BQ31 491 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 PRRG3Q9BZD7 231 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 METTL17Q9H7H0 456 aaPredicted RBP3.03□□□□□ -1.92
COL9A1-206ENST00000470652 TAS2R4Q9NYW5 299 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 ENOPH1Q9UHY7 261 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 OR52A1Q9UKL2 312 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 EXOSC1Q9Y3B2 195 aaKnown RBP3.03□□□□□ -1.92
COL9A1-206ENST00000470652 TPRKBQ9Y3C4 175 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 RHBDD3Q9Y3P4 386 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 TIMM10BQ9Y5J6 103 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 R4GMQ9 66 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 HSPE1-MOB4S4R3N1 261 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 CR1P17927 2039 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 ANKRD17O75179 2603 aaKnown RBP3.03□□□□□ -1.93
COL9A1-206ENST00000470652 MED13LQ71F56 2210 aa3.03□□□□□ -1.93
COL9A1-206ENST00000470652 ARID1AO14497 2285 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 IGKV1-27A0A075B6S5 117 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 IGKV1-9A0A0C4DH69 117 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 TRBV2A0A0J9YWF9 115 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 LOC100506127A0A0U1RQW1 187 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 A0A1B0GW55 424 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 TRIM64CA6NLI5 447 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 ZNF850A8MQ14 1090 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 F5H5P2 479 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 H3BSA7 217 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 CTAG2O75638 210 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 KBTBD11O94819 623 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 VENTXO95231 258 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 IGLV3-1P01715 115 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 CD8AP01732 235 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 OR4A8P0C604 315 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 DUX4L2P0CJ85 424 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 DUX4L3P0CJ86 424 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 DUX4L4P0CJ87 422 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 DUX4L5P0CJ88 424 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 DUX4L6P0CJ89 424 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 DUX4L7P0CJ90 424 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 MYL12AP19105 171 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 DCKP27707 260 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 OTX1P32242 354 aaPredicted RBP3.02□□□□□ -1.93
COL9A1-206ENST00000470652 APLNRP35414 380 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 ARR3P36575 388 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 PMELP40967 661 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 ALDH3B2P48448 385 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 UCP2P55851 309 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 WNT4P56705 351 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 CLDN12P56749 244 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 GABARAPL2P60520 117 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 NCS1P62166 190 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 ACTC1P68032 377 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 ACTA1P68133 377 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 FAM3AP98173 230 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 TGFBR3Q03167 851 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 TLE4Q04727 773 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 CDK5R1Q15078 307 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 SPHARQ15513 63 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 TBC1D28Q2M2D7 210 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 UBE2UQ5VVX9 321 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 AGAP6Q5VW22 663 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 GPR107Q5VW38 600 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 DMKNQ6E0U4 476 aaPredicted RBP3.02□□□□□ -1.93
COL9A1-206ENST00000470652 DUX4L9Q6RFH8 374 aaPredicted RBP3.02□□□□□ -1.93
COL9A1-206ENST00000470652 CCBE1Q6UXH8 406 aaPredicted RBP3.02□□□□□ -1.93
COL9A1-206ENST00000470652 ZNF826PQ6ZT77 177 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 PRSS48Q7RTY5 328 aa3.02□□□□□ -1.93
COL9A1-206ENST00000470652 ABHD12BQ7Z5M8 362 aaPredicted RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms