RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 A0A1W2PRD5 423 aa12.07□□□□□ -0.48
COL9A3-209ENST00000469852 A0A1W2PRF3 423 aa12.07□□□□□ -0.48
COL9A3-209ENST00000469852 A0A1W2PRM7 423 aa12.07□□□□□ -0.48
COL9A3-209ENST00000469852 MEIOCA2RUB1 952 aa12.07□□□□□ -0.48
COL9A3-209ENST00000469852 MEIS3P1A6NDR6 274 aa12.07□□□□□ -0.48
COL9A3-209ENST00000469852 ORC5O43913 435 aa12.07□□□□□ -0.48
COL9A3-209ENST00000469852 IGHV3-7P01780 117 aa12.07□□□□□ -0.48
COL9A3-209ENST00000469852 HBZP02008 142 aa12.07□□□□□ -0.48
COL9A3-209ENST00000469852 RBP4P02753 201 aa12.07□□□□□ -0.48
COL9A3-209ENST00000469852 IGHV3-43DP0DP04 118 aa12.07□□□□□ -0.48
COL9A3-209ENST00000469852 GZMHP20718 246 aa12.07□□□□□ -0.48
COL9A3-209ENST00000469852 COX7A1P24310 79 aa12.07□□□□□ -0.48
COL9A3-209ENST00000469852 TNFSF8P32971 234 aa12.07□□□□□ -0.48
COL9A3-209ENST00000469852 PNLIPRP3Q17RR3 467 aa12.07□□□□□ -0.48
COL9A3-209ENST00000469852 C6orf183Q5T699 404 aa12.07□□□□□ -0.48
COL9A3-209ENST00000469852 RUSC1-AS1Q66K80 236 aa12.07□□□□□ -0.48
COL9A3-209ENST00000469852 LEAP2Q969E1 77 aa12.07□□□□□ -0.48
COL9A3-209ENST00000469852 SUCNR1Q9BXA5 334 aa12.07□□□□□ -0.48
COL9A3-209ENST00000469852 MMP27Q9H306 513 aa12.07□□□□□ -0.48
COL9A3-209ENST00000469852 RIMS4Q9H426 269 aaPredicted RBP12.07□□□□□ -0.48
COL9A3-209ENST00000469852 IDI2-AS1Q9NZ38 188 aa12.07□□□□□ -0.48
COL9A3-209ENST00000469852 MRPS7Q9Y2R9 242 aaKnown RBP12.07□□□□□ -0.48
COL9A3-209ENST00000469852 SESN1Q9Y6P5 492 aa12.07□□□□□ -0.48
COL9A3-209ENST00000469852 FCER2P06734 321 aa12.06□□□□□ -0.48
COL9A3-209ENST00000469852 SCTP09683 121 aa12.06□□□□□ -0.48
COL9A3-209ENST00000469852 NFYBP25208 207 aa12.06□□□□□ -0.48
COL9A3-209ENST00000469852 LOXL3P58215 753 aa12.06□□□□□ -0.48
COL9A3-209ENST00000469852 GNG2P59768 71 aa12.06□□□□□ -0.48
COL9A3-209ENST00000469852 HLA-DRB3P79483 266 aa12.06□□□□□ -0.48
COL9A3-209ENST00000469852 MRPS15P82914 257 aaKnown RBP12.06□□□□□ -0.48
COL9A3-209ENST00000469852 GNMTQ14749 295 aa12.06□□□□□ -0.48
COL9A3-209ENST00000469852 ARL6IP1Q15041 203 aa12.06□□□□□ -0.48
COL9A3-209ENST00000469852 BRD3OSQ6XYD6 125 aa12.06□□□□□ -0.48
COL9A3-209ENST00000469852 SNX29P2Q8IUI4 249 aa12.06□□□□□ -0.48
COL9A3-209ENST00000469852 GVQW1Q8N7I0 195 aa12.06□□□□□ -0.48
COL9A3-209ENST00000469852 ABHD1Q96SE0 405 aa12.06□□□□□ -0.48
COL9A3-209ENST00000469852 ZNF286AQ9HBT8 521 aa12.06□□□□□ -0.48
COL9A3-209ENST00000469852 ZNRD1Q9P1U0 126 aa12.06□□□□□ -0.48
COL9A3-209ENST00000469852 A3GALT2U3KPV4 340 aa12.06□□□□□ -0.48
COL9A3-209ENST00000469852 IGKV1-6A0A0C4DH72 117 aa12.05□□□□□ -0.48
COL9A3-209ENST00000469852 F2RL2O00254 374 aa12.05□□□□□ -0.48
COL9A3-209ENST00000469852 FPR2P25090 351 aa12.05□□□□□ -0.48
COL9A3-209ENST00000469852 TALDO1P37837 337 aa12.05□□□□□ -0.48
COL9A3-209ENST00000469852 MNDAP41218 407 aa12.05□□□□□ -0.48
COL9A3-209ENST00000469852 HERPUD1Q15011 391 aa12.05□□□□□ -0.48
COL9A3-209ENST00000469852 RNASE12Q5GAN4 147 aaKnown RBP12.05□□□□□ -0.48
COL9A3-209ENST00000469852 MOB1BQ7L9L4 216 aa12.05□□□□□ -0.48
COL9A3-209ENST00000469852 PIP4P2Q8N4L2 257 aa12.05□□□□□ -0.48
COL9A3-209ENST00000469852 OR52L2PQ8NGH6 319 aa12.05□□□□□ -0.48
COL9A3-209ENST00000469852 C22orf15Q8WYQ4 148 aa12.05□□□□□ -0.48
COL9A3-209ENST00000469852 DIRAS2Q96HU8 199 aa12.05□□□□□ -0.48
COL9A3-209ENST00000469852 ST6GALNAC5Q9BVH7 336 aa12.05□□□□□ -0.48
COL9A3-209ENST00000469852 TMEM133Q9H2Q1 129 aa12.05□□□□□ -0.48
COL9A3-209ENST00000469852 KCNIP1Q9NZI2 227 aa12.05□□□□□ -0.48
COL9A3-209ENST00000469852 IGHV2-26A0A0B4J1V2 119 aa12.04□□□□□ -0.48
COL9A3-209ENST00000469852 IGHV1-69DA0A0B4J2H0 117 aa12.04□□□□□ -0.48
COL9A3-209ENST00000469852 hCG_1809904A0A1W2PP81 198 aa12.04□□□□□ -0.48
COL9A3-209ENST00000469852 A0A1W2PPE2 198 aa12.04□□□□□ -0.48
COL9A3-209ENST00000469852 A0A1W2PR64 198 aa12.04□□□□□ -0.48
COL9A3-209ENST00000469852 A0A1W2PRV1 198 aa12.04□□□□□ -0.48
COL9A3-209ENST00000469852 TRDCB7Z8K6 153 aa12.04□□□□□ -0.48
COL9A3-209ENST00000469852 SDCBPO00560 298 aaPredicted RBP12.04□□□□□ -0.48
COL9A3-209ENST00000469852 SPINT2O43291 252 aa12.04□□□□□ -0.48
COL9A3-209ENST00000469852 IGHV1-69P01742 117 aa12.04□□□□□ -0.48
COL9A3-209ENST00000469852 GSTT2P0CG29 244 aa12.04□□□□□ -0.48
COL9A3-209ENST00000469852 GSTT2BP0CG30 244 aa12.04□□□□□ -0.48
COL9A3-209ENST00000469852 DTYMKP23919 212 aa12.04□□□□□ -0.48
COL9A3-209ENST00000469852 TRAT1Q6PIZ9 186 aa12.04□□□□□ -0.48
COL9A3-209ENST00000469852 ZNF554Q86TJ5 538 aa12.04□□□□□ -0.48
COL9A3-209ENST00000469852 PRIMA1Q86XR5 153 aa12.04□□□□□ -0.48
COL9A3-209ENST00000469852 BCL6BQ8N143 479 aaPredicted RBP12.04□□□□□ -0.48
COL9A3-209ENST00000469852 OR10V1Q8NGI7 309 aa12.04□□□□□ -0.48
COL9A3-209ENST00000469852 OR6Q1Q8NGQ2 317 aa12.04□□□□□ -0.48
COL9A3-209ENST00000469852 NANPQ8TBE9 248 aa12.04□□□□□ -0.48
COL9A3-209ENST00000469852 C17orf50Q8WW18 174 aa12.04□□□□□ -0.48
COL9A3-209ENST00000469852 SOSTQ9BQB4 213 aa12.04□□□□□ -0.48
COL9A3-209ENST00000469852 ZNF69Q9UC07 566 aa12.04□□□□□ -0.48
COL9A3-209ENST00000469852 ADAM30Q9UKF2 790 aa12.04□□□□□ -0.48
COL9A3-209ENST00000469852 A0A087X0M5 115 aa12.03□□□□□ -0.48
COL9A3-209ENST00000469852 A0A1B0GX30 115 aa12.03□□□□□ -0.48
COL9A3-209ENST00000469852 A0A1W2PPE3 182 aa12.03□□□□□ -0.48
COL9A3-209ENST00000469852 ODF3BA8MYP8 253 aa12.03□□□□□ -0.48
COL9A3-209ENST00000469852 HNF1AP20823 631 aa12.03□□□□□ -0.48
COL9A3-209ENST00000469852 PRSS3P35030 304 aa12.03□□□□□ -0.48
COL9A3-209ENST00000469852 PPP1CCP36873 323 aaKnown RBP12.03□□□□□ -0.48
COL9A3-209ENST00000469852 SRP14P37108 136 aaKnown RBP12.03□□□□□ -0.48
COL9A3-209ENST00000469852 GNG10P50151 68 aa12.03□□□□□ -0.48
COL9A3-209ENST00000469852 UBE2E1P51965 193 aa12.03□□□□□ -0.48
COL9A3-209ENST00000469852 PITPNAQ00169 270 aa12.03□□□□□ -0.48
COL9A3-209ENST00000469852 IGSF11Q5DX21 431 aa12.03□□□□□ -0.48
COL9A3-209ENST00000469852 LDLRAD2Q5SZI1 272 aa12.03□□□□□ -0.48
COL9A3-209ENST00000469852 GPR157Q5UAW9 335 aa12.03□□□□□ -0.48
COL9A3-209ENST00000469852 NCR3LG1Q68D85 454 aa12.03□□□□□ -0.48
COL9A3-209ENST00000469852 CCDC190Q86UF4 302 aa12.03□□□□□ -0.48
COL9A3-209ENST00000469852 ABHD12Q8N2K0 398 aa12.03□□□□□ -0.48
COL9A3-209ENST00000469852 OR10A7Q8NGE5 316 aa12.03□□□□□ -0.48
COL9A3-209ENST00000469852 GPX8Q8TED1 209 aa12.03□□□□□ -0.48
COL9A3-209ENST00000469852 IL1F10Q8WWZ1 152 aa12.03□□□□□ -0.48
COL9A3-209ENST00000469852 SNAPC3Q92966 411 aa12.03□□□□□ -0.48
COL9A3-209ENST00000469852 AJUBAQ96IF1 538 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms