RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 Q9N2K0 584 aa10.32□□□□□ -0.76
SPTLC1-204ENST00000469778 SIRT7Q9NRC8 400 aa10.32□□□□□ -0.76
SPTLC1-204ENST00000469778 FAM96BQ9Y3D0 163 aa10.32□□□□□ -0.76
SPTLC1-204ENST00000469778 TBL2Q9Y4P3 447 aaKnown RBP10.32□□□□□ -0.76
SPTLC1-204ENST00000469778 MINOS1-NBL1R4GNA1 71 aa10.32□□□□□ -0.76
SPTLC1-204ENST00000469778 TEP1Q99973 2627 aaKnown RBP10.32□□□□□ -0.76
SPTLC1-204ENST00000469778 TRAV40A0A0B4J280 105 aa10.31□□□□□ -0.76
SPTLC1-204ENST00000469778 TRDCB7Z8K6 153 aa10.31□□□□□ -0.76
SPTLC1-204ENST00000469778 C12orf77C9JDV5 145 aa10.31□□□□□ -0.76
SPTLC1-204ENST00000469778 TOR1AO14656 332 aa10.31□□□□□ -0.76
SPTLC1-204ENST00000469778 NPFFO15130 113 aa10.31□□□□□ -0.76
SPTLC1-204ENST00000469778 CTXN2P0C2S0 81 aa10.31□□□□□ -0.76
SPTLC1-204ENST00000469778 IGHV4-38-2P0DP08 117 aa10.31□□□□□ -0.76
SPTLC1-204ENST00000469778 HOXB4P17483 251 aaPredicted RBP10.31□□□□□ -0.76
SPTLC1-204ENST00000469778 RCC1P18754 421 aaPredicted RBP10.31□□□□□ -0.76
SPTLC1-204ENST00000469778 GNG2P59768 71 aa10.31□□□□□ -0.76
SPTLC1-204ENST00000469778 HMGN3Q15651 99 aa10.31□□□□□ -0.76
SPTLC1-204ENST00000469778 AANATQ16613 207 aa10.31□□□□□ -0.76
SPTLC1-204ENST00000469778 ZNF260Q3ZCT1 412 aa10.31□□□□□ -0.76
SPTLC1-204ENST00000469778 BAIAP2L2Q6UXY1 529 aa10.31□□□□□ -0.76
SPTLC1-204ENST00000469778 ABHD12Q8N2K0 398 aa10.31□□□□□ -0.76
SPTLC1-204ENST00000469778 ZNF418Q8TF45 676 aaPredicted RBP10.31□□□□□ -0.76
SPTLC1-204ENST00000469778 FAM216AQ8WUB2 273 aa10.31□□□□□ -0.76
SPTLC1-204ENST00000469778 MALSU1Q96EH3 234 aa10.31□□□□□ -0.76
SPTLC1-204ENST00000469778 SUCNR1Q9BXA5 334 aa10.31□□□□□ -0.76
SPTLC1-204ENST00000469778 NXF2Q9GZY0 626 aaKnown RBP10.31□□□□□ -0.76
SPTLC1-204ENST00000469778 AUNIPQ9H7T9 357 aa10.31□□□□□ -0.76
SPTLC1-204ENST00000469778 JPT1Q9UK76 154 aa10.31□□□□□ -0.76
SPTLC1-204ENST00000469778 DSCAML1Q8TD84 2053 aa10.3□□□□□ -0.76
SPTLC1-204ENST00000469778 IGHV2-26A0A0B4J1V2 119 aa10.3□□□□□ -0.76
SPTLC1-204ENST00000469778 DPPA5A6NC42 116 aa10.3□□□□□ -0.76
SPTLC1-204ENST00000469778 SDCBPO00560 298 aaPredicted RBP10.3□□□□□ -0.76
SPTLC1-204ENST00000469778 ITGB1BP1O14713 200 aa10.3□□□□□ -0.76
SPTLC1-204ENST00000469778 HBZP02008 142 aa10.3□□□□□ -0.76
SPTLC1-204ENST00000469778 FBP1P09467 338 aa10.3□□□□□ -0.76
SPTLC1-204ENST00000469778 SSTR5P35346 364 aa10.3□□□□□ -0.76
SPTLC1-204ENST00000469778 CEACAM3P40198 252 aa10.3□□□□□ -0.76
SPTLC1-204ENST00000469778 ZNF626Q68DY1 528 aa10.3□□□□□ -0.76
SPTLC1-204ENST00000469778 HCP5Q6MZN7 132 aa10.3□□□□□ -0.76
SPTLC1-204ENST00000469778 PNKDQ8N490 385 aa10.3□□□□□ -0.76
SPTLC1-204ENST00000469778 OR4A4PQ8NGN8 299 aa10.3□□□□□ -0.76
SPTLC1-204ENST00000469778 OCSTAMPQ9BR26 566 aa10.3□□□□□ -0.76
SPTLC1-204ENST00000469778 SLIRPQ9GZT3 109 aaKnown RBP10.3□□□□□ -0.76
SPTLC1-204ENST00000469778 SCPEP1Q9HB40 452 aa10.3□□□□□ -0.76
SPTLC1-204ENST00000469778 OR2S2Q9NQN1 319 aa10.3□□□□□ -0.76
SPTLC1-204ENST00000469778 GFOD1Q9NXC2 390 aa10.3□□□□□ -0.76
SPTLC1-204ENST00000469778 ZNF69Q9UC07 566 aa10.3□□□□□ -0.76
SPTLC1-204ENST00000469778 AMMECR1Q9Y4X0 333 aaPredicted RBP10.3□□□□□ -0.76
SPTLC1-204ENST00000469778 NIPBLQ6KC79 2804 aaeCLIP10.3□□□□□ -0.76
SPTLC1-204ENST00000469778 FN1P02751 2386 aaKnown RBP10.29□□□□□ -0.76
SPTLC1-204ENST00000469778 ODF3BA8MYP8 253 aa10.29□□□□□ -0.76
SPTLC1-204ENST00000469778 LEUTXA8MZ59 168 aa10.29□□□□□ -0.76
SPTLC1-204ENST00000469778 OOSP1A8MZH6 123 aa10.29□□□□□ -0.76
SPTLC1-204ENST00000469778 SULT1C2O00338 296 aa10.29□□□□□ -0.76
SPTLC1-204ENST00000469778 RGS5O15539 181 aa10.29□□□□□ -0.76
SPTLC1-204ENST00000469778 YPEL1O60688 119 aa10.29□□□□□ -0.76
SPTLC1-204ENST00000469778 HPGDSO60760 199 aa10.29□□□□□ -0.76
SPTLC1-204ENST00000469778 IGLV1-47P01700 117 aa10.29□□□□□ -0.76
SPTLC1-204ENST00000469778 FCGR3AP08637 254 aa10.29□□□□□ -0.76
SPTLC1-204ENST00000469778 ELK1P19419 428 aa10.29□□□□□ -0.76
SPTLC1-204ENST00000469778 ZBTB25P24278 435 aa10.29□□□□□ -0.76
SPTLC1-204ENST00000469778 NFYBP25208 207 aa10.29□□□□□ -0.76
SPTLC1-204ENST00000469778 HTR1DP28221 377 aa10.29□□□□□ -0.76
SPTLC1-204ENST00000469778 ARHGDIBP52566 201 aa10.29□□□□□ -0.76
SPTLC1-204ENST00000469778 LOXL3P58215 753 aa10.29□□□□□ -0.76
SPTLC1-204ENST00000469778 MRPS10P82664 201 aaKnown RBP10.29□□□□□ -0.76
SPTLC1-204ENST00000469778 PRAMEF5Q5TYX0 476 aa10.29□□□□□ -0.76
SPTLC1-204ENST00000469778 ZNF782Q6ZMW2 699 aaPredicted RBP10.29□□□□□ -0.76
SPTLC1-204ENST00000469778 LINC00311Q8N616 119 aa10.29□□□□□ -0.76
SPTLC1-204ENST00000469778 MCFD2Q8NI22 146 aa10.29□□□□□ -0.76
SPTLC1-204ENST00000469778 RFESDQ8TAC1 157 aa10.29□□□□□ -0.76
SPTLC1-204ENST00000469778 SETD6Q8TBK2 473 aa10.29□□□□□ -0.76
SPTLC1-204ENST00000469778 YPEL2Q96QA6 119 aa10.29□□□□□ -0.76
SPTLC1-204ENST00000469778 ZMAT3Q9HA38 289 aaKnown RBP10.29□□□□□ -0.76
SPTLC1-204ENST00000469778 DPM3Q9P2X0 92 aa10.29□□□□□ -0.76
SPTLC1-204ENST00000469778 GNG12Q9UBI6 72 aa10.29□□□□□ -0.76
SPTLC1-204ENST00000469778 KIAA2026Q5HYC2 2103 aa10.28□□□□□ -0.76
SPTLC1-204ENST00000469778 TRAV39A0A0B4J263 110 aa10.28□□□□□ -0.76
SPTLC1-204ENST00000469778 MEIOCA2RUB1 952 aa10.28□□□□□ -0.76
SPTLC1-204ENST00000469778 TMEM235A6NFC5 223 aa10.28□□□□□ -0.76
SPTLC1-204ENST00000469778 FAM25AB3EWG3 89 aa10.28□□□□□ -0.76
SPTLC1-204ENST00000469778 FAM25CB3EWG5 89 aa10.28□□□□□ -0.76
SPTLC1-204ENST00000469778 FAM25GB3EWG6 89 aa10.28□□□□□ -0.76
SPTLC1-204ENST00000469778 J3QR06 171 aa10.28□□□□□ -0.76
SPTLC1-204ENST00000469778 MMP23AO75900 390 aa10.28□□□□□ -0.76
SPTLC1-204ENST00000469778 ARG1P05089 322 aa10.28□□□□□ -0.76
SPTLC1-204ENST00000469778 EIF4EP06730 217 aaKnown RBP10.28□□□□□ -0.76
SPTLC1-204ENST00000469778 OMGP23515 440 aa10.28□□□□□ -0.76
SPTLC1-204ENST00000469778 COX7A1P24310 79 aa10.28□□□□□ -0.76
SPTLC1-204ENST00000469778 PRSS3P35030 304 aa10.28□□□□□ -0.76
SPTLC1-204ENST00000469778 TAS2R20P59543 309 aa10.28□□□□□ -0.76
SPTLC1-204ENST00000469778 HLA-DRB3P79483 266 aa10.28□□□□□ -0.76
SPTLC1-204ENST00000469778 OLFML2AQ68BL7 652 aa10.28□□□□□ -0.76
SPTLC1-204ENST00000469778 CCDC144NLQ6NUI1 221 aa10.28□□□□□ -0.76
SPTLC1-204ENST00000469778 IL17RELQ6ZVW7 336 aa10.28□□□□□ -0.76
SPTLC1-204ENST00000469778 PIP4P2Q8N4L2 257 aa10.28□□□□□ -0.76
SPTLC1-204ENST00000469778 TMEM86BQ8N661 226 aa10.28□□□□□ -0.76
SPTLC1-204ENST00000469778 EDARADDQ8WWZ3 215 aa10.28□□□□□ -0.76
SPTLC1-204ENST00000469778 TOLLIPQ9H0E2 274 aa10.28□□□□□ -0.76
SPTLC1-204ENST00000469778 MEGF9Q9H1U4 602 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms