RNA–Protein interactions for RNA: ENST00000469769.1

THBS3-206, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-206ENST00000469769 CCDC107Q8WV48 283 aa8.56□□□□□ -1.04
THBS3-206ENST00000469769 CHMP1AQ9HD42 196 aaPredicted RBP8.56□□□□□ -1.04
THBS3-206ENST00000469769 HRASLSQ9HDD0 168 aa8.56□□□□□ -1.04
THBS3-206ENST00000469769 ZNF469Q96JG9 3925 aaPredicted RBP8.56□□□□□ -1.04
THBS3-206ENST00000469769 AKAP9Q99996 3911 aa8.56□□□□□ -1.04
THBS3-206ENST00000469769 NAV3Q8IVL0 2385 aa8.56□□□□□ -1.04
THBS3-206ENST00000469769 CCDC168Q8NDH2 2452 aa8.55□□□□□ -1.04
THBS3-206ENST00000469769 NAP1L6A6NFF2 107 aa8.55□□□□□ -1.04
THBS3-206ENST00000469769 C17orf98A8MV24 154 aa8.55□□□□□ -1.04
THBS3-206ENST00000469769 FOXH1O75593 365 aa8.55□□□□□ -1.04
THBS3-206ENST00000469769 TUSC2O75896 110 aa8.55□□□□□ -1.04
THBS3-206ENST00000469769 HBZP02008 142 aa8.55□□□□□ -1.04
THBS3-206ENST00000469769 LIPFP07098 398 aa8.55□□□□□ -1.04
THBS3-206ENST00000469769 USF1P22415 310 aaPredicted RBP8.55□□□□□ -1.04
THBS3-206ENST00000469769 ZFP36P26651 326 aaKnown RBP8.55□□□□□ -1.04
THBS3-206ENST00000469769 HLA-DMAP28067 261 aa8.55□□□□□ -1.04
THBS3-206ENST00000469769 HRH1P35367 487 aa8.55□□□□□ -1.04
THBS3-206ENST00000469769 LOXL3P58215 753 aa8.55□□□□□ -1.04
THBS3-206ENST00000469769 MEF2DQ14814 521 aa8.55□□□□□ -1.04
THBS3-206ENST00000469769 CDK10Q15131 360 aa8.55□□□□□ -1.04
THBS3-206ENST00000469769 C16orf87Q6PH81 154 aa8.55□□□□□ -1.04
THBS3-206ENST00000469769 HEPN1Q6WQI6 88 aa8.55□□□□□ -1.04
THBS3-206ENST00000469769 C1orf122Q6ZSJ8 110 aa8.55□□□□□ -1.04
THBS3-206ENST00000469769 LHFPL1Q86WI0 220 aa8.55□□□□□ -1.04
THBS3-206ENST00000469769 ARRDC1Q8N5I2 433 aa8.55□□□□□ -1.04
THBS3-206ENST00000469769 OR4D10Q8NGI6 311 aa8.55□□□□□ -1.04
THBS3-206ENST00000469769 OR52M1Q8NGK5 317 aa8.55□□□□□ -1.04
THBS3-206ENST00000469769 OR4C16Q8NGL9 310 aa8.55□□□□□ -1.04
THBS3-206ENST00000469769 MRGPRDQ8TDS7 321 aa8.55□□□□□ -1.04
THBS3-206ENST00000469769 GIMAP1Q8WWP7 306 aa8.55□□□□□ -1.04
THBS3-206ENST00000469769 MAFIPQ8WZ33 124 aa8.55□□□□□ -1.04
THBS3-206ENST00000469769 C11orf54Q9H0W9 315 aaPredicted RBP8.55□□□□□ -1.04
THBS3-206ENST00000469769 RAB9BQ9NP90 201 aa8.55□□□□□ -1.04
THBS3-206ENST00000469769 CALYQ9NYX4 217 aa8.55□□□□□ -1.04
THBS3-206ENST00000469769 KCNIP1Q9NZI2 227 aa8.55□□□□□ -1.04
THBS3-206ENST00000469769 LOC105371242A0A075B767 164 aa8.54□□□□□ -1.04
THBS3-206ENST00000469769 A0A087X0M5 115 aa8.54□□□□□ -1.04
THBS3-206ENST00000469769 TRAV39A0A0B4J263 110 aa8.54□□□□□ -1.04
THBS3-206ENST00000469769 A0A1B0GX30 115 aa8.54□□□□□ -1.04
THBS3-206ENST00000469769 FAM157AC9JC47 383 aa8.54□□□□□ -1.04
THBS3-206ENST00000469769 ITGB1BP1O14713 200 aa8.54□□□□□ -1.04
THBS3-206ENST00000469769 PHF1O43189 567 aaPredicted RBP8.54□□□□□ -1.04
THBS3-206ENST00000469769 LYRM1O43325 122 aa8.54□□□□□ -1.04
THBS3-206ENST00000469769 RAB3DO95716 219 aa8.54□□□□□ -1.04
THBS3-206ENST00000469769 ZNF728P0DKX0 622 aa8.54□□□□□ -1.04
THBS3-206ENST00000469769 SLC6A1P30531 599 aa8.54□□□□□ -1.04
THBS3-206ENST00000469769 IL2RGP31785 369 aa8.54□□□□□ -1.04
THBS3-206ENST00000469769 SSTR5P35346 364 aa8.54□□□□□ -1.04
THBS3-206ENST00000469769 FAUP35544 74 aaKnown RBP8.54□□□□□ -1.04
THBS3-206ENST00000469769 RFX2P48378 723 aa8.54□□□□□ -1.04
THBS3-206ENST00000469769 Q3ZCU0 254 aa8.54□□□□□ -1.04
THBS3-206ENST00000469769 IGSF11Q5DX21 431 aa8.54□□□□□ -1.04
THBS3-206ENST00000469769 RNASE10Q5GAN6 216 aaKnown RBP8.54□□□□□ -1.04
THBS3-206ENST00000469769 ZNF57Q68EA5 555 aaPredicted RBP8.54□□□□□ -1.04
THBS3-206ENST00000469769 C5orf24Q7Z6I8 188 aa8.54□□□□□ -1.04
THBS3-206ENST00000469769 KIR3DL3Q8N743 410 aa8.54□□□□□ -1.04
THBS3-206ENST00000469769 DUSP18Q8NEJ0 188 aa8.54□□□□□ -1.04
THBS3-206ENST00000469769 OR5H2Q8NGV7 314 aa8.54□□□□□ -1.04
THBS3-206ENST00000469769 FAM216AQ8WUB2 273 aa8.54□□□□□ -1.04
THBS3-206ENST00000469769 ARL11Q969Q4 196 aa8.54□□□□□ -1.04
THBS3-206ENST00000469769 GALMQ96C23 342 aa8.54□□□□□ -1.04
THBS3-206ENST00000469769 COX4I2Q96KJ9 171 aa8.54□□□□□ -1.04
THBS3-206ENST00000469769 ZNF714Q96N38 554 aa8.54□□□□□ -1.04
THBS3-206ENST00000469769 SLC6A7Q99884 636 aa8.54□□□□□ -1.04
THBS3-206ENST00000469769 REG4Q9BYZ8 158 aa8.54□□□□□ -1.04
THBS3-206ENST00000469769 TINAGL1Q9GZM7 467 aaPredicted RBP8.54□□□□□ -1.04
THBS3-206ENST00000469769 NARFLQ9H6Q4 476 aa8.54□□□□□ -1.04
THBS3-206ENST00000469769 UNKLQ9H9P5 680 aaKnown RBP8.54□□□□□ -1.04
THBS3-206ENST00000469769 NECAP2Q9NVZ3 263 aa8.54□□□□□ -1.04
THBS3-206ENST00000469769 A0A1W2PPH5 198 aa8.53□□□□□ -1.04
THBS3-206ENST00000469769 M0R1W7 72 aa8.53□□□□□ -1.04
THBS3-206ENST00000469769 SPINT2O43291 252 aa8.53□□□□□ -1.04
THBS3-206ENST00000469769 YPEL1O60688 119 aa8.53□□□□□ -1.04
THBS3-206ENST00000469769 PMP2P02689 132 aa8.53□□□□□ -1.04
THBS3-206ENST00000469769 FCER2P06734 321 aa8.53□□□□□ -1.04
THBS3-206ENST00000469769 PPIAL4GP0DN37 164 aa8.53□□□□□ -1.04
THBS3-206ENST00000469769 OR5H8P0DN80 308 aa8.53□□□□□ -1.04
THBS3-206ENST00000469769 FPR2P25090 351 aa8.53□□□□□ -1.04
THBS3-206ENST00000469769 CD34P28906 385 aa8.53□□□□□ -1.04
THBS3-206ENST00000469769 GLP1RP43220 463 aa8.53□□□□□ -1.04
THBS3-206ENST00000469769 INPP1P49441 399 aa8.53□□□□□ -1.04
THBS3-206ENST00000469769 DEFA1P59665 94 aa8.53□□□□□ -1.04
THBS3-206ENST00000469769 DEFA3P59666 94 aa8.53□□□□□ -1.04
THBS3-206ENST00000469769 CHRFAM7AQ494W8 412 aa8.53□□□□□ -1.04
THBS3-206ENST00000469769 PLA1AQ53H76 456 aa8.53□□□□□ -1.04
THBS3-206ENST00000469769 AADACL3Q5VUY0 350 aa8.53□□□□□ -1.04
THBS3-206ENST00000469769 H1FOOQ8IZA3 346 aaPredicted RBP8.53□□□□□ -1.04
THBS3-206ENST00000469769 C8orf31Q8N9H6 132 aa8.53□□□□□ -1.04
THBS3-206ENST00000469769 OR1L1Q8NH94 360 aa8.53□□□□□ -1.04
THBS3-206ENST00000469769 ZNF596Q8TC21 504 aa8.53□□□□□ -1.04
THBS3-206ENST00000469769 H1FXQ92522 213 aaKnown RBP8.53□□□□□ -1.04
THBS3-206ENST00000469769 MRGPRFQ96AM1 343 aa8.53□□□□□ -1.04
THBS3-206ENST00000469769 KIRREL1Q96J84 757 aa8.53□□□□□ -1.04
THBS3-206ENST00000469769 YPEL2Q96QA6 119 aa8.53□□□□□ -1.04
THBS3-206ENST00000469769 GAL3ST2Q9H3Q3 398 aa8.53□□□□□ -1.04
THBS3-206ENST00000469769 ING3Q9NXR8 418 aa8.53□□□□□ -1.04
THBS3-206ENST00000469769 IDI2-AS1Q9NZ38 188 aa8.53□□□□□ -1.04
THBS3-206ENST00000469769 JPT1Q9UK76 154 aa8.53□□□□□ -1.04
THBS3-206ENST00000469769 ABCA1O95477 2261 aa8.53□□□□□ -1.04
THBS3-206ENST00000469769 IGHV2-70DA0A0C4DH43 119 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms