RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 OR2T35Q8NGX2 323 aa15.82■□□□□ 0.12
SMC4-209ENST00000468653 OR1L1Q8NH94 360 aa15.82■□□□□ 0.12
SMC4-209ENST00000468653 RTN4IP1Q8WWV3 396 aaPredicted RBP15.82■□□□□ 0.12
SMC4-209ENST00000468653 OR2A7Q96R45 310 aa15.82■□□□□ 0.12
SMC4-209ENST00000468653 RANBP3Q9H6Z4 567 aaPredicted RBP15.82■□□□□ 0.12
SMC4-209ENST00000468653 SLC2A9Q9NRM0 540 aa15.82■□□□□ 0.12
SMC4-209ENST00000468653 CBLN4Q9NTU7 201 aa15.82■□□□□ 0.12
SMC4-209ENST00000468653 PIPOXQ9P0Z9 390 aa15.82■□□□□ 0.12
SMC4-209ENST00000468653 ABCA4P78363 2273 aa15.82■□□□□ 0.12
SMC4-209ENST00000468653 ODAMA1E959 279 aa15.82■□□□□ 0.12
SMC4-209ENST00000468653 HBZP02008 142 aa15.82■□□□□ 0.12
SMC4-209ENST00000468653 SELLP14151 372 aa15.82■□□□□ 0.12
SMC4-209ENST00000468653 GZMKP49863 264 aa15.82■□□□□ 0.12
SMC4-209ENST00000468653 P2RX3P56373 397 aa15.82■□□□□ 0.12
SMC4-209ENST00000468653 H2BFSP57053 126 aa15.82■□□□□ 0.12
SMC4-209ENST00000468653 DCAF12L2Q5VW00 463 aa15.82■□□□□ 0.12
SMC4-209ENST00000468653 ZNF788Q6ZQV5 615 aa15.82■□□□□ 0.12
SMC4-209ENST00000468653 DRAXINQ8NBI3 349 aaPredicted RBP15.82■□□□□ 0.12
SMC4-209ENST00000468653 FBXO9Q9UK97 447 aaPredicted RBP15.82■□□□□ 0.12
SMC4-209ENST00000468653 KCNIP3Q9Y2W7 256 aa15.82■□□□□ 0.12
SMC4-209ENST00000468653 IGKV1D-13A0A0B4J2D9 117 aa15.81■□□□□ 0.12
SMC4-209ENST00000468653 IGKV1-13P0DP09 117 aa15.81■□□□□ 0.12
SMC4-209ENST00000468653 ERP29P30040 261 aaKnown RBP15.81■□□□□ 0.12
SMC4-209ENST00000468653 GNRHRP30968 328 aa15.81■□□□□ 0.12
SMC4-209ENST00000468653 CEACAM6P40199 344 aa15.81■□□□□ 0.12
SMC4-209ENST00000468653 HFEQ30201 348 aa15.81■□□□□ 0.12
SMC4-209ENST00000468653 ARL11Q969Q4 196 aa15.81■□□□□ 0.12
SMC4-209ENST00000468653 DCTN5Q9BTE1 182 aa15.81■□□□□ 0.12
SMC4-209ENST00000468653 TRAF4Q9BUZ4 470 aaPredicted RBP15.81■□□□□ 0.12
SMC4-209ENST00000468653 FAM234AQ9H0X4 552 aa15.81■□□□□ 0.12
SMC4-209ENST00000468653 PRR13Q9NZ81 148 aa15.81■□□□□ 0.12
SMC4-209ENST00000468653 KIAA2026Q5HYC2 2103 aa15.8■□□□□ 0.12
SMC4-209ENST00000468653 A0A0B4J2A0 478 aa15.8■□□□□ 0.12
SMC4-209ENST00000468653 A0A1B0GW55 424 aa15.8■□□□□ 0.12
SMC4-209ENST00000468653 SIGLEC5O15389 551 aa15.8■□□□□ 0.12
SMC4-209ENST00000468653 HEXAP06865 529 aa15.8■□□□□ 0.12
SMC4-209ENST00000468653 DUX4L2P0CJ85 424 aa15.8■□□□□ 0.12
SMC4-209ENST00000468653 DUX4L3P0CJ86 424 aa15.8■□□□□ 0.12
SMC4-209ENST00000468653 DUX4L4P0CJ87 422 aa15.8■□□□□ 0.12
SMC4-209ENST00000468653 DUX4L5P0CJ88 424 aa15.8■□□□□ 0.12
SMC4-209ENST00000468653 DUX4L6P0CJ89 424 aa15.8■□□□□ 0.12
SMC4-209ENST00000468653 DUX4L7P0CJ90 424 aa15.8■□□□□ 0.12
SMC4-209ENST00000468653 GZMHP20718 246 aa15.8■□□□□ 0.12
SMC4-209ENST00000468653 ANKRD55Q3KP44 614 aa15.8■□□□□ 0.12
SMC4-209ENST00000468653 DUX4L9Q6RFH8 374 aaPredicted RBP15.8■□□□□ 0.12
SMC4-209ENST00000468653 FAM185AQ8N0U4 392 aa15.8■□□□□ 0.12
SMC4-209ENST00000468653 FAM216BQ8N7L0 139 aa15.8■□□□□ 0.12
SMC4-209ENST00000468653 OR5M8Q8NGP6 311 aa15.8■□□□□ 0.12
SMC4-209ENST00000468653 HYLS1Q96M11 299 aa15.8■□□□□ 0.12
SMC4-209ENST00000468653 NAA60Q9H7X0 242 aa15.8■□□□□ 0.12
SMC4-209ENST00000468653 RDH8Q9NYR8 311 aa15.8■□□□□ 0.12
SMC4-209ENST00000468653 DUX4Q9UBX2 424 aa15.8■□□□□ 0.12
SMC4-209ENST00000468653 SHPKQ9UHJ6 478 aa15.8■□□□□ 0.12
SMC4-209ENST00000468653 MEX3AA1L020 520 aaKnown RBP15.8■□□□□ 0.12
SMC4-209ENST00000468653 FAM25EA8MYX2 175 aa15.8■□□□□ 0.12
SMC4-209ENST00000468653 GPR31O00270 319 aa15.8■□□□□ 0.12
SMC4-209ENST00000468653 CCSO14618 274 aa15.8■□□□□ 0.12
SMC4-209ENST00000468653 HSD17B6O14756 317 aa15.8■□□□□ 0.12
SMC4-209ENST00000468653 TMPRSS2O15393 492 aa15.8■□□□□ 0.12
SMC4-209ENST00000468653 SPINT2O43291 252 aa15.8■□□□□ 0.12
SMC4-209ENST00000468653 IGFBP2P18065 325 aa15.8■□□□□ 0.12
SMC4-209ENST00000468653 DNASE1P24855 282 aa15.8■□□□□ 0.12
SMC4-209ENST00000468653 SSTR5P35346 364 aa15.8■□□□□ 0.12
SMC4-209ENST00000468653 LUMP51884 338 aaPredicted RBP15.8■□□□□ 0.12
SMC4-209ENST00000468653 LY6G6FQ5SQ64 297 aa15.8■□□□□ 0.12
SMC4-209ENST00000468653 OR10V1Q8NGI7 309 aa15.8■□□□□ 0.12
SMC4-209ENST00000468653 ASB13Q8WXK3 278 aa15.8■□□□□ 0.12
SMC4-209ENST00000468653 NINJ1Q92982 152 aa15.8■□□□□ 0.12
SMC4-209ENST00000468653 PDCD10Q9BUL8 212 aa15.8■□□□□ 0.12
SMC4-209ENST00000468653 RAB1BQ9H0U4 201 aa15.8■□□□□ 0.12
SMC4-209ENST00000468653 CCL28Q9NRJ3 127 aa15.8■□□□□ 0.12
SMC4-209ENST00000468653 RBM7Q9Y580 266 aaKnown RBP15.8■□□□□ 0.12
SMC4-209ENST00000468653 DSCAMO60469 2012 aa15.79■□□□□ 0.12
SMC4-209ENST00000468653 HLA-GP17693 338 aa15.79■□□□□ 0.12
SMC4-209ENST00000468653 KCNJ8Q15842 424 aa15.79■□□□□ 0.12
SMC4-209ENST00000468653 ZNF818PQ6ZRF7 136 aa15.79■□□□□ 0.12
SMC4-209ENST00000468653 RFESDQ8TAC1 157 aa15.79■□□□□ 0.12
SMC4-209ENST00000468653 WDR89Q96FK6 387 aaPredicted RBP15.79■□□□□ 0.12
SMC4-209ENST00000468653 NCOR1P1Q9H4R4 102 aa15.79■□□□□ 0.12
SMC4-209ENST00000468653 OR6C3Q9NZP0 311 aa15.79■□□□□ 0.12
SMC4-209ENST00000468653 OPN4Q9UHM6 478 aa15.79■□□□□ 0.12
SMC4-209ENST00000468653 ZFYVE26Q68DK2 2539 aa15.79■□□□□ 0.12
SMC4-209ENST00000468653 DBX1A6NMT0 343 aa15.78■□□□□ 0.12
SMC4-209ENST00000468653 S100GP29377 79 aa15.78■□□□□ 0.12
SMC4-209ENST00000468653 MEX3BQ6ZN04 569 aaKnown RBP15.78■□□□□ 0.12
SMC4-209ENST00000468653 CMTM1Q8IZ96 169 aa15.78■□□□□ 0.12
SMC4-209ENST00000468653 OR52L2PQ8NGH6 319 aa15.78■□□□□ 0.12
SMC4-209ENST00000468653 C14orf79Q96F83 325 aa15.78■□□□□ 0.12
SMC4-209ENST00000468653 SMG1Q96Q15 3661 aaKnown RBP15.78■□□□□ 0.12
SMC4-209ENST00000468653 C5orf51A6NDU8 294 aa15.77■□□□□ 0.12
SMC4-209ENST00000468653 C15orf65H3BRN8 121 aa15.77■□□□□ 0.12
SMC4-209ENST00000468653 MPPED1O15442 326 aa15.77■□□□□ 0.12
SMC4-209ENST00000468653 C1QL1O75973 258 aa15.77■□□□□ 0.12
SMC4-209ENST00000468653 CD8AP01732 235 aa15.77■□□□□ 0.12
SMC4-209ENST00000468653 SOD3P08294 240 aa15.77■□□□□ 0.12
SMC4-209ENST00000468653 OR5AC1P0C628 307 aa15.77■□□□□ 0.12
SMC4-209ENST00000468653 RND3P61587 244 aa15.77■□□□□ 0.12
SMC4-209ENST00000468653 SP6Q3SY56 376 aa15.77■□□□□ 0.12
SMC4-209ENST00000468653 C11orf71Q6IPW1 123 aa15.77■□□□□ 0.12
SMC4-209ENST00000468653 GALNT14Q96FL9 552 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms