RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 DOCK2Q92608 1830 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 SLIT1O75093 1534 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 ATRNO75882 1429 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 CRB1P82279 1406 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 TNS3Q68CZ2 1445 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 ZFC3H1O60293 1989 aaKnown RBP2.62□□□□□ -1.99
VPS13D-203ENST00000466732 IGHV2OR16-5A0A0B4J2B6 119 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 EXOC1LA0A1B0GW35 172 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 PSMB11A5LHX3 300 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 HMSDA8MTL9 139 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 C21orf140B9A014 251 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 F5H5T6 163 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 UPK1AO00322 258 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 CASKO14936 926 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 PLA2G10O15496 165 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 HCRTR1O43613 425 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 SLC37A4O43826 429 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 CDS2O95674 445 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 CLIC3O95833 236 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 CST1P01037 141 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 JCHAINP01591 159 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 SERPINE1P05121 402 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 DCNP07585 359 aaKnown RBP2.62□□□□□ -1.99
VPS13D-203ENST00000466732 MPC1LP0DKB6 136 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 SMIM17P0DL12 118 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 SULT1A3P0DMM9 295 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 SULT1A4P0DMN0 295 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 CT45A10P0DMU9 189 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 OR5H8P0DN80 308 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 ESDP10768 282 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 LIPCP11150 499 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 ADCYAP1P18509 176 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 ADORA2BP29275 332 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 CMPK1P30085 196 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 OR1D4P47884 311 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 RPL29P47914 159 aaKnown RBP2.62□□□□□ -1.99
VPS13D-203ENST00000466732 UQCRFS1P47985 274 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 DUSP3P51452 185 aaPredicted RBP2.62□□□□□ -1.99
VPS13D-203ENST00000466732 CNN1P51911 297 aaKnown RBP2.62□□□□□ -1.99
VPS13D-203ENST00000466732 CLDN12P56749 244 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 TPI1P60174 286 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 PLP1P60201 277 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 TIMM10P62072 90 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 LSM3P62310 102 aaKnown RBP2.62□□□□□ -1.99
VPS13D-203ENST00000466732 GNG3P63215 75 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 BTG2P78543 158 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 HOXC5Q00444 222 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 ELAVL3Q14576 367 aaKnown RBP2.62□□□□□ -1.99
VPS13D-203ENST00000466732 PSG5Q15238 335 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 CCSMST1Q4G0I0 132 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 TIMM23BQ5SRD1 257 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 TMEM69Q5SWH9 247 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 C22orf42Q6IC83 251 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 ALKAL2Q6UX46 152 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 HIST2H3AQ71DI3 136 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 H2BFWTQ7Z2G1 175 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 C6orf120Q7Z4R8 191 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 UBALD2Q8IYN6 164 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 CMTM1Q8IZ96 169 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 SPICQ8N5J4 248 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 OR11H7Q8NGC8 314 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 OR52E4Q8NGH9 312 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 OR51Q1Q8NH59 317 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 LGALS14Q8TCE9 139 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 NAT6Q93015 286 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 LHX4Q969G2 390 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 ARL11Q969Q4 196 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 GPR146Q96CH1 333 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 RAB39BQ96DA2 213 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 WDR34Q96EX3 536 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 CENPNQ96H22 339 aaPredicted RBP2.62□□□□□ -1.99
VPS13D-203ENST00000466732 COQ2Q96H96 371 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 SLC35G5Q96KT7 338 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 ZNF75AQ96N20 296 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 ACCSQ96QU6 501 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 KIR2DL4Q99706 377 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 LINC00470Q9BZP3 86 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 SIRPDQ9H106 197 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 OR51J1Q9H342 316 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 MFSD1Q9H3U5 465 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 SLC17A5Q9NRA2 495 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 LYRM2Q9NU23 88 aaPredicted RBP2.62□□□□□ -1.99
VPS13D-203ENST00000466732 ASF1BQ9NVP2 202 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 DPM3Q9P2X0 92 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 P2RX2Q9UBL9 471 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 NAT8Q9UHE5 227 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 IKZF2Q9UKS7 526 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 TNFSF18Q9UNG2 199 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 TPRKBQ9Y3C4 175 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 OR51B2Q9Y5P1 312 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 FLVCR1Q9Y5Y0 555 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 V9GYH0 126 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 PTPRMP28827 1452 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 RREB1Q92766 1687 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 DOCK1Q14185 1865 aa2.62□□□□□ -1.99
VPS13D-203ENST00000466732 PDCD11Q14690 1871 aaKnown RBP2.62□□□□□ -1.99
VPS13D-203ENST00000466732 BAZ2AQ9UIF9 1905 aaKnown RBP2.62□□□□□ -1.99
VPS13D-203ENST00000466732 NUP210LQ5VU65 1888 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 ANKRD30BLA7E2S9 258 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 HIDE1A8MVS5 230 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms