RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 LPAR5Q9H1C0 372 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 DCSTAMPQ9H295 470 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 GHITMQ9H3K2 345 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 LINC00574Q9H8X3 128 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 RHBDL2Q9NX52 303 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 ETAA1Q9NY74 926 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 CCDC59Q9P031 241 aaKnown RBP5.68□□□□□ -1.5
CLDN4-204ENST00000466411 TBL2Q9Y4P3 447 aaKnown RBP5.68□□□□□ -1.5
CLDN4-204ENST00000466411 AMMECR1Q9Y4X0 333 aaPredicted RBP5.68□□□□□ -1.5
CLDN4-204ENST00000466411 WNK2Q9Y3S1 2297 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 TRBV6-6A0A0A6YYG2 114 aa5.67□□□□□ -1.5
CLDN4-204ENST00000466411 TMEM272A0A1B0GTI8 110 aa5.67□□□□□ -1.5
CLDN4-204ENST00000466411 KBTBD11-OT1A0A1B0GTJ5 212 aa5.67□□□□□ -1.5
CLDN4-204ENST00000466411 TMEM82A0PJX8 343 aa5.67□□□□□ -1.5
CLDN4-204ENST00000466411 TXNL1O43396 289 aa5.67□□□□□ -1.5
CLDN4-204ENST00000466411 FBP1P09467 338 aa5.67□□□□□ -1.5
CLDN4-204ENST00000466411 CD3GP09693 182 aa5.67□□□□□ -1.5
CLDN4-204ENST00000466411 MMP9P14780 707 aa5.67□□□□□ -1.5
CLDN4-204ENST00000466411 ZNF182P17025 639 aaPredicted RBP5.67□□□□□ -1.5
CLDN4-204ENST00000466411 AMY2BP19961 511 aa5.67□□□□□ -1.5
CLDN4-204ENST00000466411 DUSP1P28562 367 aa5.67□□□□□ -1.5
CLDN4-204ENST00000466411 MNDAP41218 407 aa5.67□□□□□ -1.5
CLDN4-204ENST00000466411 CBX5P45973 191 aa5.67□□□□□ -1.5
CLDN4-204ENST00000466411 CEBPDP49716 269 aaPredicted RBP5.67□□□□□ -1.5
CLDN4-204ENST00000466411 VEGFCP49767 419 aa5.67□□□□□ -1.5
CLDN4-204ENST00000466411 LGALS4P56470 323 aa5.67□□□□□ -1.5
CLDN4-204ENST00000466411 OR10A3P58181 314 aa5.67□□□□□ -1.5
CLDN4-204ENST00000466411 RPL15P61313 204 aaKnown RBP5.67□□□□□ -1.5
CLDN4-204ENST00000466411 ARF6P62330 175 aa5.67□□□□□ -1.5
CLDN4-204ENST00000466411 AESQ08117 197 aa5.67□□□□□ -1.5
CLDN4-204ENST00000466411 HNRNPA0Q13151 305 aaKnown RBP5.67□□□□□ -1.5
CLDN4-204ENST00000466411 ATXN7L3Q14CW9 347 aaPredicted RBP5.67□□□□□ -1.5
CLDN4-204ENST00000466411 AANATQ16613 207 aa5.67□□□□□ -1.5
CLDN4-204ENST00000466411 IDNKQ5T6J7 187 aa5.67□□□□□ -1.5
CLDN4-204ENST00000466411 RSBN1Q5VWQ0 802 aaPredicted RBP5.67□□□□□ -1.5
CLDN4-204ENST00000466411 TMEM200BQ69YZ2 307 aa5.67□□□□□ -1.5
CLDN4-204ENST00000466411 CCDC144NLQ6NUI1 221 aa5.67□□□□□ -1.5
CLDN4-204ENST00000466411 VMO1Q7Z5L0 202 aa5.67□□□□□ -1.5
CLDN4-204ENST00000466411 BVESQ8NE79 360 aa5.67□□□□□ -1.5
CLDN4-204ENST00000466411 OR4S1Q8NGB4 309 aa5.67□□□□□ -1.5
CLDN4-204ENST00000466411 OR10R2Q8NGX6 335 aa5.67□□□□□ -1.5
CLDN4-204ENST00000466411 LGALS14Q8TCE9 139 aa5.67□□□□□ -1.5
CLDN4-204ENST00000466411 GFI1Q99684 422 aa5.67□□□□□ -1.5
CLDN4-204ENST00000466411 PCGF1Q9BSM1 259 aa5.67□□□□□ -1.5
CLDN4-204ENST00000466411 MS4A7Q9GZW8 240 aaPredicted RBP5.67□□□□□ -1.5
CLDN4-204ENST00000466411 ATG5Q9H1Y0 275 aa5.67□□□□□ -1.5
CLDN4-204ENST00000466411 ABCG5Q9H222 651 aa5.67□□□□□ -1.5
CLDN4-204ENST00000466411 BANF2Q9H503 90 aa5.67□□□□□ -1.5
CLDN4-204ENST00000466411 CHMP1AQ9HD42 196 aaPredicted RBP5.67□□□□□ -1.5
CLDN4-204ENST00000466411 MMP26Q9NRE1 261 aa5.67□□□□□ -1.5
CLDN4-204ENST00000466411 IL36RNQ9UBH0 155 aa5.67□□□□□ -1.5
CLDN4-204ENST00000466411 TRAPPC2LQ9UL33 140 aa5.67□□□□□ -1.5
CLDN4-204ENST00000466411 SESN1Q9Y6P5 492 aa5.67□□□□□ -1.5
CLDN4-204ENST00000466411 A0A087X0M5 115 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 TRAV40A0A0B4J280 105 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 IGHV1-69DA0A0B4J2H0 117 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 A0A1B0GX30 115 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 BTBD17A6NE02 478 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 CCDC160A6NGH7 325 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 OOSP1A8MZH6 123 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 H3BS24 57 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 HSPB6O14558 160 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 TOR1AO14656 332 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 NAPSAO96009 420 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 PAHP00439 452 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 FSHBP01225 129 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 IGHV1-69P01742 117 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 CTXN2P0C2S0 81 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 IGHV1-8P0DP01 117 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 SELLP14151 372 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 HIST1H1DP16402 221 aaKnown RBP5.66□□□□□ -1.5
CLDN4-204ENST00000466411 DTYMKP23919 212 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 IL3RAP26951 378 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 CD34P28906 385 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 RPS19P39019 145 aaKnown RBP5.66□□□□□ -1.5
CLDN4-204ENST00000466411 PRRX1P54821 245 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 VBP1P61758 197 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 NCS1P62166 190 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 MRPS10P82664 201 aaKnown RBP5.66□□□□□ -1.5
CLDN4-204ENST00000466411 HTD2P86397 168 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 LY6G6FQ5SQ64 297 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 KPRPQ5T749 579 aaPredicted RBP5.66□□□□□ -1.5
CLDN4-204ENST00000466411 MINOS1Q5TGZ0 78 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 Q6ZS49 121 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 BATF2Q8N1L9 274 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 TMEM86BQ8N661 226 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 BEND2Q8NDZ0 799 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 OR11H6Q8NGC7 330 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 GALMQ96C23 342 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 ISOC1Q96CN7 298 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 COQ2Q96H96 371 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 RCC1LQ96I51 464 aaKnown RBP5.66□□□□□ -1.5
CLDN4-204ENST00000466411 CMSS1Q9BQ75 279 aaKnown RBP5.66□□□□□ -1.5
CLDN4-204ENST00000466411 CLEC7AQ9BXN2 247 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 TMEM133Q9H2Q1 129 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 MMP27Q9H306 513 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 BATF3Q9NR55 127 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 C19orf12Q9NSK7 152 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 MBNL3Q9NUK0 354 aaKnown RBP5.66□□□□□ -1.5
CLDN4-204ENST00000466411 CALYQ9NYX4 217 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms