RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 Q6ZS49 121 aa14.18□□□□□ -0.14
PTPRU-206ENST00000465525 OR1A1Q9P1Q5 309 aa14.18□□□□□ -0.14
PTPRU-206ENST00000465525 AKAP9Q99996 3911 aa14.18□□□□□ -0.14
PTPRU-206ENST00000465525 PPIAL4CA0A0B4J2A2 164 aa14.17□□□□□ -0.14
PTPRU-206ENST00000465525 MMP23AO75900 390 aa14.17□□□□□ -0.14
PTPRU-206ENST00000465525 CD74P04233 296 aa14.17□□□□□ -0.14
PTPRU-206ENST00000465525 AMY2AP04746 511 aa14.17□□□□□ -0.14
PTPRU-206ENST00000465525 PPIAL4GP0DN37 164 aa14.17□□□□□ -0.14
PTPRU-206ENST00000465525 CGB3P0DN86 165 aa14.17□□□□□ -0.14
PTPRU-206ENST00000465525 CGB7P0DN87 165 aa14.17□□□□□ -0.14
PTPRU-206ENST00000465525 TAS2R46P59540 309 aa14.17□□□□□ -0.14
PTPRU-206ENST00000465525 SRSF7Q16629 238 aaKnown RBP eCLIP14.17□□□□□ -0.14
PTPRU-206ENST00000465525 UTF1Q5T230 341 aa14.17□□□□□ -0.14
PTPRU-206ENST00000465525 PRAMEF5Q5TYX0 476 aa14.17□□□□□ -0.14
PTPRU-206ENST00000465525 POC5Q8NA72 575 aa14.17□□□□□ -0.14
PTPRU-206ENST00000465525 MINDY2Q8NBR6 621 aa14.17□□□□□ -0.14
PTPRU-206ENST00000465525 OR52L2PQ8NGH6 319 aa14.17□□□□□ -0.14
PTPRU-206ENST00000465525 SLC6A7Q99884 636 aa14.17□□□□□ -0.14
PTPRU-206ENST00000465525 TMPRSS13Q9BYE2 586 aa14.17□□□□□ -0.14
PTPRU-206ENST00000465525 NCOR1P1Q9H4R4 102 aa14.17□□□□□ -0.14
PTPRU-206ENST00000465525 TRBV23-1A0A0A0MS06 115 aa14.17□□□□□ -0.14
PTPRU-206ENST00000465525 FAM172BPA6NC97 362 aa14.17□□□□□ -0.14
PTPRU-206ENST00000465525 GPR37O15354 613 aa14.17□□□□□ -0.14
PTPRU-206ENST00000465525 LYRM1O43325 122 aa14.17□□□□□ -0.14
PTPRU-206ENST00000465525 IGHV3-7P01780 117 aa14.17□□□□□ -0.14
PTPRU-206ENST00000465525 GZMHP20718 246 aa14.17□□□□□ -0.14
PTPRU-206ENST00000465525 DLX1P56177 255 aa14.17□□□□□ -0.14
PTPRU-206ENST00000465525 ASAH1Q13510 395 aa14.17□□□□□ -0.14
PTPRU-206ENST00000465525 GNMTQ14749 295 aa14.17□□□□□ -0.14
PTPRU-206ENST00000465525 CR1LQ2VPA4 569 aa14.17□□□□□ -0.14
PTPRU-206ENST00000465525 GLCCI1Q86VQ1 547 aa14.17□□□□□ -0.14
PTPRU-206ENST00000465525 OR4A4PQ8NGN8 299 aa14.17□□□□□ -0.14
PTPRU-206ENST00000465525 CHPT1Q8WUD6 406 aa14.17□□□□□ -0.14
PTPRU-206ENST00000465525 CORO2AQ92828 525 aa14.17□□□□□ -0.14
PTPRU-206ENST00000465525 ZNF714Q96N38 554 aa14.17□□□□□ -0.14
PTPRU-206ENST00000465525 MMP26Q9NRE1 261 aa14.17□□□□□ -0.14
PTPRU-206ENST00000465525 NECAP2Q9NVZ3 263 aa14.17□□□□□ -0.14
PTPRU-206ENST00000465525 ONECUT1Q9UBC0 465 aa14.17□□□□□ -0.14
PTPRU-206ENST00000465525 SLC23A1Q9UHI7 598 aa14.17□□□□□ -0.14
PTPRU-206ENST00000465525 ZNF107Q9UII5 783 aaPredicted RBP14.17□□□□□ -0.14
PTPRU-206ENST00000465525 MGAT4AQ9UM21 535 aa14.17□□□□□ -0.14
PTPRU-206ENST00000465525 UBE2J1Q9Y385 318 aaPredicted RBP14.17□□□□□ -0.14
PTPRU-206ENST00000465525 MYO9AB2RTY4 2548 aa14.16□□□□□ -0.14
PTPRU-206ENST00000465525 TEX15Q9BXT5 2789 aa14.16□□□□□ -0.14
PTPRU-206ENST00000465525 KBTBD11-OT1A0A1B0GTJ5 212 aa14.16□□□□□ -0.14
PTPRU-206ENST00000465525 ZNF729A6NN14 1252 aaPredicted RBP14.16□□□□□ -0.14
PTPRU-206ENST00000465525 CYSRT1A8MQ03 144 aa14.16□□□□□ -0.14
PTPRU-206ENST00000465525 SPINT2O43291 252 aa14.16□□□□□ -0.14
PTPRU-206ENST00000465525 ZNF728P0DKX0 622 aa14.16□□□□□ -0.14
PTPRU-206ENST00000465525 OR5H8P0DN80 308 aa14.16□□□□□ -0.14
PTPRU-206ENST00000465525 PRB3Q04118 309 aaPredicted RBP14.16□□□□□ -0.14
PTPRU-206ENST00000465525 DYRK1AQ13627 763 aa14.16□□□□□ -0.14
PTPRU-206ENST00000465525 SCGB2B2Q4G0G5 96 aa14.16□□□□□ -0.14
PTPRU-206ENST00000465525 TRAT1Q6PIZ9 186 aa14.16□□□□□ -0.14
PTPRU-206ENST00000465525 ZNF782Q6ZMW2 699 aaPredicted RBP14.16□□□□□ -0.14
PTPRU-206ENST00000465525 OR10V1Q8NGI7 309 aa14.16□□□□□ -0.14
PTPRU-206ENST00000465525 OR51S1Q8NGJ8 323 aa14.16□□□□□ -0.14
PTPRU-206ENST00000465525 GALMQ96C23 342 aa14.16□□□□□ -0.14
PTPRU-206ENST00000465525 LPAR3Q9UBY5 353 aa14.16□□□□□ -0.14
PTPRU-206ENST00000465525 OTOGQ6ZRI0 2925 aa14.15□□□□□ -0.14
PTPRU-206ENST00000465525 POM121CA8CG34 1229 aa14.15□□□□□ -0.14
PTPRU-206ENST00000465525 IFNA6P05013 189 aa14.15□□□□□ -0.14
PTPRU-206ENST00000465525 ZNF735P0CB33 412 aa14.15□□□□□ -0.14
PTPRU-206ENST00000465525 NFYAP23511 347 aaPredicted RBP14.15□□□□□ -0.14
PTPRU-206ENST00000465525 BTCP35070 178 aa14.15□□□□□ -0.14
PTPRU-206ENST00000465525 CCR6P51684 374 aa14.15□□□□□ -0.14
PTPRU-206ENST00000465525 DLX6P56179 175 aa14.15□□□□□ -0.14
PTPRU-206ENST00000465525 DEFA1P59665 94 aa14.15□□□□□ -0.14
PTPRU-206ENST00000465525 DEFA3P59666 94 aa14.15□□□□□ -0.14
PTPRU-206ENST00000465525 C11orf91Q3C1V1 193 aa14.15□□□□□ -0.14
PTPRU-206ENST00000465525 ACTBL2Q562R1 376 aa14.15□□□□□ -0.14
PTPRU-206ENST00000465525 OVCH2Q7RTZ1 564 aa14.15□□□□□ -0.14
PTPRU-206ENST00000465525 LY6G5BQ8NDX9 201 aa14.15□□□□□ -0.14
PTPRU-206ENST00000465525 C8orf46Q8TAG6 207 aa14.15□□□□□ -0.14
PTPRU-206ENST00000465525 LEAP2Q969E1 77 aa14.15□□□□□ -0.14
PTPRU-206ENST00000465525 PARP12Q9H0J9 701 aaKnown RBP14.15□□□□□ -0.14
PTPRU-206ENST00000465525 ITPR3Q14573 2671 aa14.15□□□□□ -0.14
PTPRU-206ENST00000465525 A8MXK9 166 aa14.14□□□□□ -0.15
PTPRU-206ENST00000465525 HSPA12AO43301 675 aa14.14□□□□□ -0.15
PTPRU-206ENST00000465525 TBPP20226 339 aa14.14□□□□□ -0.15
PTPRU-206ENST00000465525 NFYBP25208 207 aa14.14□□□□□ -0.15
PTPRU-206ENST00000465525 FAUP35544 74 aaKnown RBP14.14□□□□□ -0.15
PTPRU-206ENST00000465525 PPP1CCP36873 323 aaKnown RBP14.14□□□□□ -0.15
PTPRU-206ENST00000465525 TSPAN5P62079 268 aa14.14□□□□□ -0.15
PTPRU-206ENST00000465525 MEF2DQ14814 521 aa14.14□□□□□ -0.15
PTPRU-206ENST00000465525 VAX1Q5SQQ9 334 aa14.14□□□□□ -0.15
PTPRU-206ENST00000465525 CD276Q5ZPR3 534 aa14.14□□□□□ -0.15
PTPRU-206ENST00000465525 C1orf159Q96HA4 380 aa14.14□□□□□ -0.15
PTPRU-206ENST00000465525 GINS4Q9BRT9 223 aa14.14□□□□□ -0.15
PTPRU-206ENST00000465525 CABLES2Q9BTV7 478 aa14.14□□□□□ -0.15
PTPRU-206ENST00000465525 GAL3ST2Q9H3Q3 398 aa14.14□□□□□ -0.15
PTPRU-206ENST00000465525 TAS2R3Q9NYW6 316 aa14.14□□□□□ -0.15
PTPRU-206ENST00000465525 CENPXA8MT69 81 aa14.14□□□□□ -0.15
PTPRU-206ENST00000465525 FOXH1O75593 365 aa14.14□□□□□ -0.15
PTPRU-206ENST00000465525 LIPFP07098 398 aa14.14□□□□□ -0.15
PTPRU-206ENST00000465525 SPNP16150 400 aa14.14□□□□□ -0.15
PTPRU-206ENST00000465525 FCGR2CP31995 323 aa14.14□□□□□ -0.15
PTPRU-206ENST00000465525 ARF6P62330 175 aa14.14□□□□□ -0.15
PTPRU-206ENST00000465525 SPNS3Q6ZMD2 512 aa14.14□□□□□ -0.15
PTPRU-206ENST00000465525 CENPSQ8N2Z9 138 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms