RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 CLDN17P56750 224 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 RBM11P57052 281 aaKnown RBP6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 TPPP2P59282 170 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 MSMO1Q15800 293 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 TMEM183BQ1AE95 376 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 LRRC75BQ2VPJ9 315 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 DCAF10Q5QP82 559 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 CARD17Q5XLA6 110 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 TMEM42Q69YG0 159 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 ABLIM2Q6H8Q1 611 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 RHBDD2Q6NTF9 364 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 LANCL3Q6ZV70 420 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 C1QL2Q7Z5L3 287 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 C17orf82Q86X59 251 aaPredicted RBP6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 ZNF573Q86YE8 665 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 MKXQ8IYA7 352 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 C7orf61Q8IZ16 206 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 TMEM123Q8N131 208 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 SLC22A18ASQ8N1D0 253 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 GPR137CQ8N3F9 429 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 ZNF664Q8N3J9 261 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 ZNF709Q8N972 641 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 Q8NFD4 153 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 OR1F12Q8NHA8 337 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 ZNF296Q8WUU4 475 aaPredicted RBP6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 LHX4Q969G2 390 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 DNAJA3Q96EY1 480 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 NEIL1Q96FI4 390 aaPredicted RBP6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 LYZL4Q96KX0 146 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 TP53RKQ96S44 253 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 NUDT22Q9BRQ3 303 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 LRRC61Q9BV99 259 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 ULBP2Q9BZM5 246 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 KCNIP2Q9NS61 270 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 LIN7CQ9NUP9 197 aaKnown RBP6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 C19orf73Q9NVV2 129 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 OR6C3Q9NZP0 311 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 ZNF319Q9P2F9 582 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 MMP17Q9ULZ9 603 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 GOLT1BQ9Y3E0 138 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 TRBV6-6A0A0A6YYG2 114 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 IGHV5-51A0A0C4DH38 117 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 KIR2DL5BA0A0G2JN68 375 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 KIR2DL5BA0A0G2JPC4 375 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 A0A1W2PPC4 97 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 MARCH11A6NNE9 402 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 B4E171 279 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 DEGS1O15121 323 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 SYNGR2O43760 224 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 TUSC2O75896 110 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 ONECUT2O95948 504 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 OPN1LWP04000 364 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 IGHV4-34P06331 123 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 FGF5P12034 268 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 COX5AP20674 150 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 TUBG1P23258 451 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 F2RP25116 425 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 CDAP32320 146 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 TSPAN7P41732 249 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 COL10A1Q03692 680 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 ZNF154Q13106 437 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 TMEM249Q2WGJ8 235 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 NRN1LQ496H8 165 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 GFI1BQ5VTD9 330 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 WDR25Q64LD2 544 aaPredicted RBP6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 C16orf82Q7Z2V1 217 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 CPEB2Q7Z5Q1 589 aaKnown RBP6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 KIR2DL5AQ8N109 375 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 GBGT1Q8N5D6 347 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 TMEM217Q8N7C4 229 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 NAXEQ8NCW5 288 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 OR2M3Q8NG83 312 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 OR51G1Q8NGK1 321 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 TMEM171Q8WVE6 324 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 DNASE2BQ8WZ79 361 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 EXTL1Q92935 676 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 LIN37Q96GY3 246 aaPredicted RBP6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 ZNF845Q96IR2 970 aaPredicted RBP6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 CIB3Q96Q77 187 aaPredicted RBP6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 KLHDC3Q9BQ90 382 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 C20orf144Q9BQM9 153 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 TMEM204Q9BSN7 226 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 SOX7Q9BT81 388 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 PLA2G2FQ9BZM2 168 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 OR51B6Q9H340 312 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 GLRX2Q9NS18 164 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 RPRMQ9NS64 109 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 PSENENQ9NZ42 101 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 SEMA5BQ9P283 1151 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 NAGKQ9UJ70 344 aa6.17□□□□□ -1.42
CLSTN1-204ENST00000464286 SZT2Q5T011 3432 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 IGLV3-12A0A075B6K2 115 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 TRBV9A0A0B4J1U6 114 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 TRBV11-1A0A0K0K1C0 115 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 NPIPB11E5RHQ5 1161 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 LMO7DNF2Z398 122 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 DLEU1O43261 78 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 PRKNO60260 465 aaPredicted RBP6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 MMP23AO75900 390 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 OR2J2O76002 312 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms