RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 HTR2CP28335 458 aa2.94□□□□□ -1.94
SCFD1-204ENST00000463622 ZNF93P35789 620 aaPredicted RBP2.94□□□□□ -1.94
SCFD1-204ENST00000463622 MTCP1P56278 107 aa2.94□□□□□ -1.94
SCFD1-204ENST00000463622 ERVK11-1P61568 191 aa2.94□□□□□ -1.94
SCFD1-204ENST00000463622 RPS23P62266 143 aaKnown RBP2.94□□□□□ -1.94
SCFD1-204ENST00000463622 PPP3R1P63098 170 aa2.94□□□□□ -1.94
SCFD1-204ENST00000463622 GNG3P63215 75 aa2.94□□□□□ -1.94
SCFD1-204ENST00000463622 PDZK1IP1Q13113 114 aa2.94□□□□□ -1.94
SCFD1-204ENST00000463622 IL13RA2Q14627 380 aa2.94□□□□□ -1.94
SCFD1-204ENST00000463622 TRAM1Q15629 374 aa2.94□□□□□ -1.94
SCFD1-204ENST00000463622 C2orf76Q3KRA6 126 aa2.94□□□□□ -1.94
SCFD1-204ENST00000463622 UTF1Q5T230 341 aa2.94□□□□□ -1.94
SCFD1-204ENST00000463622 AVPI1Q5T686 147 aa2.94□□□□□ -1.94
SCFD1-204ENST00000463622 KPRPQ5T749 579 aaPredicted RBP2.94□□□□□ -1.94
SCFD1-204ENST00000463622 LCE1EQ5T753 118 aa2.94□□□□□ -1.94
SCFD1-204ENST00000463622 FAM53AQ6NSI3 398 aaPredicted RBP2.94□□□□□ -1.94
SCFD1-204ENST00000463622 LYPD2Q6UXB3 125 aa2.94□□□□□ -1.94
SCFD1-204ENST00000463622 ASCL4Q6XD76 172 aa2.94□□□□□ -1.94
SCFD1-204ENST00000463622 GDPGP1Q6ZNW5 385 aa2.94□□□□□ -1.94
SCFD1-204ENST00000463622 SNX29P2Q8IUI4 249 aa2.94□□□□□ -1.94
SCFD1-204ENST00000463622 BPIFB2Q8N4F0 458 aa2.94□□□□□ -1.94
SCFD1-204ENST00000463622 CD177Q8N6Q3 437 aa2.94□□□□□ -1.94
SCFD1-204ENST00000463622 TEX45Q8NA69 505 aa2.94□□□□□ -1.94
SCFD1-204ENST00000463622 OR5T2Q8NGG2 359 aa2.94□□□□□ -1.94
SCFD1-204ENST00000463622 OR5A2Q8NGI9 324 aa2.94□□□□□ -1.94
SCFD1-204ENST00000463622 OR5D14Q8NGL3 314 aa2.94□□□□□ -1.94
SCFD1-204ENST00000463622 OR13G1Q8NGZ3 307 aa2.94□□□□□ -1.94
SCFD1-204ENST00000463622 OR8S1Q8NH09 359 aa2.94□□□□□ -1.94
SCFD1-204ENST00000463622 LRRC29Q8WV35 223 aa2.94□□□□□ -1.94
SCFD1-204ENST00000463622 BORCS8Q96FH0 119 aa2.94□□□□□ -1.94
SCFD1-204ENST00000463622 CITED1Q99966 193 aa2.94□□□□□ -1.94
SCFD1-204ENST00000463622 NRIP2Q9BQI9 281 aa2.94□□□□□ -1.94
SCFD1-204ENST00000463622 HDHD3Q9BSH5 251 aaPredicted RBP2.94□□□□□ -1.94
SCFD1-204ENST00000463622 FAM192AQ9GZU8 254 aa2.94□□□□□ -1.94
SCFD1-204ENST00000463622 LPAR5Q9H1C0 372 aa2.94□□□□□ -1.94
SCFD1-204ENST00000463622 OPA3Q9H6K4 179 aa2.94□□□□□ -1.94
SCFD1-204ENST00000463622 ELL3Q9HB65 397 aaPredicted RBP2.94□□□□□ -1.94
SCFD1-204ENST00000463622 LPAR2Q9HBW0 351 aa2.94□□□□□ -1.94
SCFD1-204ENST00000463622 ABCB9Q9NP78 766 aa2.94□□□□□ -1.94
SCFD1-204ENST00000463622 DYNLRB1Q9NP97 96 aa2.94□□□□□ -1.94
SCFD1-204ENST00000463622 CCDC59Q9P031 241 aaKnown RBP2.94□□□□□ -1.94
SCFD1-204ENST00000463622 CTSZQ9UBR2 303 aa2.94□□□□□ -1.94
SCFD1-204ENST00000463622 ZNF391Q9UJN7 358 aa2.94□□□□□ -1.94
SCFD1-204ENST00000463622 ING4Q9UNL4 249 aa2.94□□□□□ -1.94
SCFD1-204ENST00000463622 PPIAL4AQ9Y536 164 aa2.94□□□□□ -1.94
SCFD1-204ENST00000463622 MPC1Q9Y5U8 109 aa2.94□□□□□ -1.94
SCFD1-204ENST00000463622 HEATR1Q9H583 2144 aaKnown RBP2.94□□□□□ -1.94
SCFD1-204ENST00000463622 TENM3Q9P273 2699 aa2.94□□□□□ -1.94
SCFD1-204ENST00000463622 IGKV1D-17A0A075B6S4 117 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 PPIAL4EA0A075B759 164 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 PPIAL4CA0A0B4J2A2 164 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 A0A0G2JMP0 313 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 A0A0X1KG70 313 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 A0A1B0GUS0 222 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 OR5B21A6NL26 309 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 A6NLC8 198 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 SRRM5B3KS81 715 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 PPIAL4DF5H284 164 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 J3QT63 122 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 ZNF701M0R085 212 aaPredicted RBP2.93□□□□□ -1.94
SCFD1-204ENST00000463622 GEMIN2O14893 280 aaKnown RBP2.93□□□□□ -1.94
SCFD1-204ENST00000463622 SOCS1O15524 211 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 SLC25A17O43808 307 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 LHBP01229 141 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 FCER2P06734 321 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 PGA5P0DJD9 388 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 PPIAL4FP0DN26 164 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 MDKP21741 143 aaPredicted RBP2.93□□□□□ -1.94
SCFD1-204ENST00000463622 MAPK3P27361 379 aaPredicted RBP2.93□□□□□ -1.94
SCFD1-204ENST00000463622 PTGFRP43088 359 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 GPR6P46095 362 aaPredicted RBP2.93□□□□□ -1.94
SCFD1-204ENST00000463622 RBP2P50120 134 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 BMXP51813 675 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 FUT6P51993 359 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 TMEM50BP56557 158 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 ZMYND11Q15326 602 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 RAB11BQ15907 218 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 TIMM50Q3ZCQ8 353 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 SLC22A6Q4U2R8 563 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 Q6P435 159 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 SIGLECL1Q8N7X8 197 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 POC1AQ8NBT0 407 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 DEFB108BQ8NET1 73 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 OR4M2Q8NGB6 313 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 OR4M1Q8NGD0 313 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 OR6M1Q8NGM8 313 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 RDH5Q92781 318 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 SPSB1Q96BD6 273 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 FAM3DQ96BQ1 224 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 C10orf35Q96D05 121 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 MYCBPQ99417 103 aaPredicted RBP2.93□□□□□ -1.94
SCFD1-204ENST00000463622 GPER1Q99527 375 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 SDHCQ99643 169 aaPredicted RBP2.93□□□□□ -1.94
SCFD1-204ENST00000463622 MICU1Q9BPX6 476 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 BCL7BQ9BQE9 202 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 RTL8AQ9BWD3 113 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 CTDSP1Q9GZU7 261 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 NARFLQ9H6Q4 476 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 PLGRKTQ9HBL7 147 aa2.93□□□□□ -1.94
SCFD1-204ENST00000463622 HES4Q9HCC6 221 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms