RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 C22orf15Q8WYQ4 148 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 ISOC1Q96CN7 298 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 KIRREL1Q96J84 757 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 ABCG5Q9H222 651 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 TAF9BQ9HBM6 251 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 ZNF286AQ9HBT8 521 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 IFT46Q9NQC8 304 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 OR2S2Q9NQN1 319 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.22□□□□□ -1.57
SF3B1-206ENST00000462613 MBNL3Q9NUK0 354 aaKnown RBP5.22□□□□□ -1.57
SF3B1-206ENST00000462613 CCDC59Q9P031 241 aaKnown RBP5.22□□□□□ -1.57
SF3B1-206ENST00000462613 RABL2AQ9UBK7 228 aaPredicted RBP5.22□□□□□ -1.57
SF3B1-206ENST00000462613 ZNF69Q9UC07 566 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 AK3Q9UIJ7 227 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 JPT1Q9UK76 154 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 RABL2BQ9UNT1 228 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 MINOS1-NBL1R4GNA1 71 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 C2CD3Q4AC94 2353 aa5.21□□□□□ -1.57
SF3B1-206ENST00000462613 AKAP9Q99996 3911 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 TRAV18A0A075B6X5 111 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 A0A087X0M5 115 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 A0A0A6YYD4 124 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 TRBV6-6A0A0A6YYG2 114 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 TRAV39A0A0B4J263 110 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 A0A1B0GX30 115 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 A0A1W2PRD5 423 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 A0A1W2PRF3 423 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 A0A1W2PRM7 423 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 FAM172BPA6NC97 362 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 TMEM235A6NFC5 223 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 LEUTXA8MZ59 168 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 C12orf77C9JDV5 145 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 NPIPB11E5RHQ5 1161 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 H3BMQ9 156 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 F2RL2O00254 374 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 MFNGO00587 321 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 XRCC3O43542 346 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 NAPSAO96009 420 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 HBZP02008 142 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 CTXN2P0C2S0 81 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 RCC1P18754 421 aaPredicted RBP5.21□□□□□ -1.58
SF3B1-206ENST00000462613 DTYMKP23919 212 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 ZBTB25P24278 435 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 CD34P28906 385 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 BRS3P32247 399 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 S100A5P33763 92 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 GNG10P50151 68 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 RAB7AP51149 207 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 TMEM50BP56557 158 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 HTD2P86397 168 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 BAMBIQ13145 260 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 MADCAM1Q13477 382 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 HMGN3Q15651 99 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 SRSF7Q16629 238 aaKnown RBP eCLIP5.21□□□□□ -1.58
SF3B1-206ENST00000462613 C17orf58Q2M2W7 97 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 MOGAT2Q3SYC2 334 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 KLF17Q5JT82 389 aaPredicted RBP5.21□□□□□ -1.58
SF3B1-206ENST00000462613 PLAC9Q5JTB6 97 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 HACD4Q5VWC8 232 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 RUSC1-AS1Q66K80 236 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 ZNF626Q68DY1 528 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 BAIAP2L2Q6UXY1 529 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 TCF23Q7RTU1 214 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 DTX3Q8N9I9 347 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 BEND2Q8NDZ0 799 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 OR2AK2Q8NG84 335 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 OR5R1Q8NH85 324 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 CAPSLQ8WWF8 208 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 DYRK2Q92630 601 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 RPEQ96AT9 228 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 MALSU1Q96EH3 234 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 SLC6A7Q99884 636 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 GINS4Q9BRT9 223 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 C6orf62Q9GZU0 229 aaPredicted RBP5.21□□□□□ -1.58
SF3B1-206ENST00000462613 MMP28Q9H239 520 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 LINC00574Q9H8X3 128 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 ZNF581Q9P0T4 197 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 RBM7Q9Y580 266 aaKnown RBP5.21□□□□□ -1.58
SF3B1-206ENST00000462613 POMT1Q9Y6A1 747 aa5.21□□□□□ -1.58
SF3B1-206ENST00000462613 A0A0U1RQK1 487 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 FOXI3A8MTJ6 420 aaPredicted RBP5.2□□□□□ -1.58
SF3B1-206ENST00000462613 OOSP1A8MZH6 123 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 TRDCB7Z8K6 153 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 J3QR06 171 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 FABP7O15540 132 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 TXNL1O43396 289 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 YPEL1O60688 119 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 TPPPO94811 219 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 DIRAS3O95661 229 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 CRYBA1P05813 215 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 FCGR3AP08637 254 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 CGB3P0DN86 165 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 CGB7P0DN87 165 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 PRSS3P35030 304 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 ARPC4P59998 168 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 HILS1P60008 231 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 PLA2G7Q13093 441 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 SPCS2Q15005 226 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 SSX2Q16385 188 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 LRRC75BQ2VPJ9 315 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms