RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 J3QRE1 110 aa8.38□□□□□ -1.07
CBX3-205ENST00000462165 SLC16A6O15403 523 aa8.38□□□□□ -1.07
CBX3-205ENST00000462165 SLC31A2O15432 143 aa8.38□□□□□ -1.07
CBX3-205ENST00000462165 ORC5O43913 435 aa8.38□□□□□ -1.07
CBX3-205ENST00000462165 HLA-DRB1P01911 266 aa8.38□□□□□ -1.07
CBX3-205ENST00000462165 IGHV3-43DP0DP04 118 aa8.38□□□□□ -1.07
CBX3-205ENST00000462165 SLC2A2P11168 524 aaPredicted RBP8.38□□□□□ -1.07
CBX3-205ENST00000462165 MYF6P23409 242 aa8.38□□□□□ -1.07
CBX3-205ENST00000462165 LORP23490 312 aaPredicted RBP8.38□□□□□ -1.07
CBX3-205ENST00000462165 SLURP1P55000 103 aa8.38□□□□□ -1.07
CBX3-205ENST00000462165 GABPB1Q06547 395 aaPredicted RBP8.38□□□□□ -1.07
CBX3-205ENST00000462165 SRSF7Q16629 238 aaKnown RBP eCLIP8.38□□□□□ -1.07
CBX3-205ENST00000462165 ASCL4Q6XD76 172 aa8.38□□□□□ -1.07
CBX3-205ENST00000462165 SLC25A48Q6ZT89 311 aaKnown RBP8.38□□□□□ -1.07
CBX3-205ENST00000462165 LYPD6Q86Y78 171 aa8.38□□□□□ -1.07
CBX3-205ENST00000462165 ZNF439Q8NDP4 499 aa8.38□□□□□ -1.07
CBX3-205ENST00000462165 RBMXL1Q96E39 390 aaKnown RBP8.38□□□□□ -1.07
CBX3-205ENST00000462165 PELI1Q96FA3 418 aa8.38□□□□□ -1.07
CBX3-205ENST00000462165 CPNE2Q96FN4 548 aaPredicted RBP8.38□□□□□ -1.07
CBX3-205ENST00000462165 GABARAPL1Q9H0R8 117 aa8.38□□□□□ -1.07
CBX3-205ENST00000462165 TPSG1Q9NRR2 321 aa8.38□□□□□ -1.07
CBX3-205ENST00000462165 C19orf73Q9NVV2 129 aa8.38□□□□□ -1.07
CBX3-205ENST00000462165 ZNF581Q9P0T4 197 aa8.38□□□□□ -1.07
CBX3-205ENST00000462165 WSB1Q9Y6I7 421 aa8.38□□□□□ -1.07
CBX3-205ENST00000462165 LINC01619G3V211 115 aa8.37□□□□□ -1.07
CBX3-205ENST00000462165 GABRPO00591 440 aa8.37□□□□□ -1.07
CBX3-205ENST00000462165 ATP6V0E1O15342 81 aa8.37□□□□□ -1.07
CBX3-205ENST00000462165 RPSAP08865 295 aaKnown RBP8.37□□□□□ -1.07
CBX3-205ENST00000462165 OR8U9P0C7N5 309 aa8.37□□□□□ -1.07
CBX3-205ENST00000462165 IGHV4-30-4P0DP06 118 aa8.37□□□□□ -1.07
CBX3-205ENST00000462165 POLR2IP36954 125 aaKnown RBP8.37□□□□□ -1.07
CBX3-205ENST00000462165 RSU1Q15404 277 aa8.37□□□□□ -1.07
CBX3-205ENST00000462165 MMDQ15546 238 aa8.37□□□□□ -1.07
CBX3-205ENST00000462165 NHLRC3Q5JS37 347 aa8.37□□□□□ -1.07
CBX3-205ENST00000462165 LPCAT4Q643R3 524 aa8.37□□□□□ -1.07
CBX3-205ENST00000462165 Q8N1Y9 231 aa8.37□□□□□ -1.07
CBX3-205ENST00000462165 MINDY2Q8NBR6 621 aa8.37□□□□□ -1.07
CBX3-205ENST00000462165 OR10K1Q8NGX5 313 aa8.37□□□□□ -1.07
CBX3-205ENST00000462165 UBALD1Q8TB05 177 aa8.37□□□□□ -1.07
CBX3-205ENST00000462165 TNFAIP8L1Q8WVP5 186 aa8.37□□□□□ -1.07
CBX3-205ENST00000462165 CIB1Q99828 191 aa8.37□□□□□ -1.07
CBX3-205ENST00000462165 KRTAP17-1Q9BYP8 105 aa8.37□□□□□ -1.07
CBX3-205ENST00000462165 TOLLIPQ9H0E2 274 aa8.37□□□□□ -1.07
CBX3-205ENST00000462165 ALX4Q9H161 411 aaPredicted RBP8.37□□□□□ -1.07
CBX3-205ENST00000462165 POMPQ9Y244 141 aa8.37□□□□□ -1.07
CBX3-205ENST00000462165 ST3GAL6Q9Y274 331 aa8.37□□□□□ -1.07
CBX3-205ENST00000462165 IGHV4OR15-8A0A075B7B6 117 aa8.36□□□□□ -1.07
CBX3-205ENST00000462165 A0A087WW49 117 aa8.36□□□□□ -1.07
CBX3-205ENST00000462165 IGHV7-81A0A0B4J1V7 117 aa8.36□□□□□ -1.07
CBX3-205ENST00000462165 TRAV41A0A0B4J266 112 aa8.36□□□□□ -1.07
CBX3-205ENST00000462165 DAPL1A0PJW8 107 aa8.36□□□□□ -1.07
CBX3-205ENST00000462165 J3QLW9 94 aa8.36□□□□□ -1.07
CBX3-205ENST00000462165 JTBO76095 146 aa8.36□□□□□ -1.07
CBX3-205ENST00000462165 OR7C1O76099 320 aaPredicted RBP8.36□□□□□ -1.07
CBX3-205ENST00000462165 HTR3BO95264 441 aa8.36□□□□□ -1.07
CBX3-205ENST00000462165 LGALS1P09382 135 aaKnown RBP8.36□□□□□ -1.07
CBX3-205ENST00000462165 ZNF19P17023 458 aa8.36□□□□□ -1.07
CBX3-205ENST00000462165 RAB3AP20336 220 aa8.36□□□□□ -1.07
CBX3-205ENST00000462165 ZNF134P52741 427 aa8.36□□□□□ -1.07
CBX3-205ENST00000462165 RBM11P57052 281 aaKnown RBP8.36□□□□□ -1.07
CBX3-205ENST00000462165 LSAMPQ13449 338 aa8.36□□□□□ -1.07
CBX3-205ENST00000462165 ATP6AP1Q15904 470 aa8.36□□□□□ -1.07
CBX3-205ENST00000462165 CT45A1Q5HYN5 189 aa8.36□□□□□ -1.07
CBX3-205ENST00000462165 ZNF529Q6P280 563 aa8.36□□□□□ -1.07
CBX3-205ENST00000462165 LINC00596Q86U02 117 aa8.36□□□□□ -1.07
CBX3-205ENST00000462165 CT45A3Q8NHU0 189 aa8.36□□□□□ -1.07
CBX3-205ENST00000462165 ARPC1AQ92747 370 aa8.36□□□□□ -1.07
CBX3-205ENST00000462165 C4orf36Q96KX1 117 aa8.36□□□□□ -1.07
CBX3-205ENST00000462165 GPER1Q99527 375 aa8.36□□□□□ -1.07
CBX3-205ENST00000462165 SPATA25Q9BR10 227 aa8.36□□□□□ -1.07
CBX3-205ENST00000462165 GABARAPL3Q9BY60 117 aa8.36□□□□□ -1.07
CBX3-205ENST00000462165 RIBC2Q9H4K1 309 aa8.36□□□□□ -1.07
CBX3-205ENST00000462165 PARP11Q9NR21 331 aa8.36□□□□□ -1.07
CBX3-205ENST00000462165 MRPS28Q9Y2Q9 187 aaKnown RBP8.36□□□□□ -1.07
CBX3-205ENST00000462165 GEMIN2O14893 280 aaKnown RBP8.35□□□□□ -1.07
CBX3-205ENST00000462165 MAGEB3O15480 346 aa8.35□□□□□ -1.07
CBX3-205ENST00000462165 HSPA12AO43301 675 aa8.35□□□□□ -1.07
CBX3-205ENST00000462165 ATP8B1O43520 1251 aa8.35□□□□□ -1.07
CBX3-205ENST00000462165 LANCL1O43813 399 aa8.35□□□□□ -1.07
CBX3-205ENST00000462165 MT-ND4P03905 459 aa8.35□□□□□ -1.07
CBX3-205ENST00000462165 BLVRBP30043 206 aaPredicted RBP8.35□□□□□ -1.07
CBX3-205ENST00000462165 GYS2P54840 703 aa8.35□□□□□ -1.07
CBX3-205ENST00000462165 ACTBP60709 375 aa8.35□□□□□ -1.07
CBX3-205ENST00000462165 PITPNAQ00169 270 aa8.35□□□□□ -1.07
CBX3-205ENST00000462165 MPV17LQ2QL34 196 aa8.35□□□□□ -1.07
CBX3-205ENST00000462165 TMEM30BQ3MIR4 351 aa8.35□□□□□ -1.07
CBX3-205ENST00000462165 DNAL1Q4LDG9 190 aa8.35□□□□□ -1.07
CBX3-205ENST00000462165 C19orf54Q5BKX5 351 aa8.35□□□□□ -1.07
CBX3-205ENST00000462165 STEAP3Q658P3 488 aa8.35□□□□□ -1.07
CBX3-205ENST00000462165 ZNF497Q6ZNH5 498 aa8.35□□□□□ -1.07
CBX3-205ENST00000462165 SATL1Q86VE3 508 aa8.35□□□□□ -1.07
CBX3-205ENST00000462165 ZDHHC13Q8IUH4 622 aa8.35□□□□□ -1.07
CBX3-205ENST00000462165 SGPP2Q8IWX5 399 aa8.35□□□□□ -1.07
CBX3-205ENST00000462165 ACBD7Q8N6N7 88 aa8.35□□□□□ -1.07
CBX3-205ENST00000462165 OR51A2Q8NGJ7 313 aa8.35□□□□□ -1.07
CBX3-205ENST00000462165 CCDC107Q8WV48 283 aa8.35□□□□□ -1.07
CBX3-205ENST00000462165 TRUB1Q8WWH5 349 aaKnown RBP8.35□□□□□ -1.07
CBX3-205ENST00000462165 OR4C12Q96R67 309 aa8.35□□□□□ -1.07
CBX3-205ENST00000462165 ANKRD60Q9BZ19 345 aa8.35□□□□□ -1.07
CBX3-205ENST00000462165 FAM192AQ9GZU8 254 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms